CX300536

Overview
NameCX300536
Unique NameCX300536
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length664
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig90 contig Ccv1_Contig90:521..1184. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300536 vs. ExPASy Swiss-Prot
Match: CAHC_PEA (Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.406e-65
Identity = 118/151 (78.15%), Postives = 127/151 (84.11%), Query Frame = 2
Query:    2 LDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDF 454
            LDFQPGEAFVVRNVAN+VPPYDQ K            LHLKVSNIVVIGHSACGGIKGL+SF FDG  STDFIE+WVKIG+PAK+KV  +HGD PF + CT+CEKEAVN SL NLLTYPFVREGLVNKTLALKGGYYDFV GSFELWGL+F
Sbjct:  170 LDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEF 320          
BLAST of CX300536 vs. ExPASy Swiss-Prot
Match: CAHC_ARATH (Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 2.108e-61
Identity = 113/151 (74.83%), Postives = 125/151 (82.78%), Query Frame = 2
Query:    2 LDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDF 454
            LDFQPG+AFVVRN+AN+VPP+D+ K            LHLKV NIVVIGHSACGGIKGLMSF  DGNNSTDFIEDWVKI +PAKSKV++E GD  F DQC  CE+EAVNVSL+NLLTYPFVREGLV  TLALKGGYYDFV G+FELWGL+F
Sbjct:  178 LDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKGGYYDFVKGAFELWGLEF 328          
BLAST of CX300536 vs. ExPASy Swiss-Prot
Match: CAHC_TOBAC (Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.330e-60
Identity = 113/151 (74.83%), Postives = 123/151 (81.46%), Query Frame = 2
Query:    2 LDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDF 454
            L+FQPGEAFVVRN+AN+VP YD+T+            LHLKV NIVVIGHSACGGIKGLMS   DG+ ST FIEDWVKIG+PAK+KV  EH DK F DQCT CEKEAVNVSL NLLTYPFVREGLV KTLALKGG+YDFVNG FELWGL+F
Sbjct:  163 LNFQPGEAFVVRNIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFIEDWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGGHYDFVNGGFELWGLEF 313          
BLAST of CX300536 vs. ExPASy Swiss-Prot
Match: CAHC_SPIOL (Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 4.395e-59
Identity = 109/151 (72.19%), Postives = 123/151 (81.46%), Query Frame = 2
Query:    2 LDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDF 454
            LDFQPGEAF+VRN+AN+VP +D+ K            LHLKV NIVVIGHSACGGIKGLMSF   G  +TDFIEDWVKI +PAK KVL EHG+  F +QCT+CEKEAVNVSL NLLTYPFVR+GLV KTLAL+GGYYDFVNGSFELWGL++
Sbjct:  161 LDFQPGEAFMVRNIANMVPVFDKDKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPDAGPTTTDFIEDWVKICLPAKHKVLAEHGNATFAEQCTHCEKEAVNVSLGNLLTYPFVRDGLVKKTLALQGGYYDFVNGSFELWGLEY 311          
BLAST of CX300536 vs. ExPASy Swiss-Prot
Match: CAH2_ARATH (Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 4.395e-59
Identity = 111/151 (73.51%), Postives = 120/151 (79.47%), Query Frame = 2
Query:    2 LDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDF 454
            LDF PG+AFVVRN+AN+VPP+D+ K            LHLKV NIVVIGHSACGGIKGLMSF  DGNNSTDFIEDWVKI +PAKSKVL E     F DQC  CE+EAVNVSL+NLLTYPFVREG+V  TLALKGGYYDFVNGSFELW L F
Sbjct:  101 LDFHPGDAFVVRNIANMVPPFDKVKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVLAESESSAFEDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLALKGGYYDFVNGSFELWELQF 251          
BLAST of CX300536 vs. ExPASy Swiss-Prot
Match: CAHX_FLABI (Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 2.412e-57
Identity = 107/151 (70.86%), Postives = 119/151 (78.81%), Query Frame = 2
Query:    2 LDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDF 454
            LDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+F  +G +STDFIEDWVK+ +PAKSKV+ EH      DQC  CEKEAVNVSL NLLTYPFVR+GL NKTLALKGG+YDFVNG+FELW LDF
Sbjct:  172 LDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNKTLALKGGHYDFVNGTFELWALDF 322          
BLAST of CX300536 vs. ExPASy Swiss-Prot
Match: CAHX_FLAPR (Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 9.164e-57
Identity = 106/151 (70.20%), Postives = 118/151 (78.15%), Query Frame = 2
Query:    2 LDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDF 454
            LDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+F  +G +STDFIEDWVK+ +PAKSKV+ EH      DQC  CEKEAVNVSL NLLTYPFVR+GL N TLALKGG+YDFVNG+FELW LDF
Sbjct:  171 LDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDF 321          
BLAST of CX300536 vs. ExPASy Swiss-Prot
Match: CAHX_FLABR (Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 9.164e-57
Identity = 106/151 (70.20%), Postives = 118/151 (78.15%), Query Frame = 2
Query:    2 LDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDF 454
            LDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+F  +G +STDFIEDWVK+ +PAKSKV+ EH      DQC  CEKEAVNVSL NLLTYPFVR+GL N TLALKGG+YDFVNG+FELW LDF
Sbjct:  172 LDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDF 322          
BLAST of CX300536 vs. ExPASy Swiss-Prot
Match: CAH1_FLALI (Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 9.164e-57
Identity = 106/151 (70.20%), Postives = 118/151 (78.15%), Query Frame = 2
Query:    2 LDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDF 454
            LDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+F  +G +STDFIEDWVK+ +PAKSKV+ EH      DQC  CEKEAVNVSL NLLTYPFVR+GL N TLALKGG+YDFVNG+FELW LDF
Sbjct:  172 LDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDF 322          
BLAST of CX300536 vs. ExPASy Swiss-Prot
Match: CAH2_FLALI (Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.257e-54
Identity = 102/151 (67.55%), Postives = 114/151 (75.50%), Query Frame = 2
Query:    2 LDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDF 454
            LDFQPGEAFVVRN+AN+VPPYD  K            LHLKV NIVVIGHS CGGIKGLMS   DG  ++DFIE WVK+G+PAKSKV     +  F D CT CEKEAVNVSL NLLTYPFVR+ LVNK L+LKG +YDFVNG+F+LW LDF
Sbjct:   32 LDFQPGEAFVVRNIANMVPPYDTIKHSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPASDFIEQWVKLGLPAKSKVKANCNNLEFADLCTKCEKEAVNVSLGNLLTYPFVRDALVNKKLSLKGAHYDFVNGAFDLWNLDF 182          
The following BLAST results are available for this feature:
BLAST of CX300536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CAHC_PEA2.406e-6578.15Carbonic anhydrase, chloroplastic OS=Pisum sativum... [more]
CAHC_ARATH2.108e-6174.83Carbonic anhydrase, chloroplastic OS=Arabidopsis t... [more]
CAHC_TOBAC2.330e-6074.83Carbonic anhydrase, chloroplastic OS=Nicotiana tab... [more]
CAHC_SPIOL4.395e-5972.19Carbonic anhydrase, chloroplastic OS=Spinacia oler... [more]
CAH2_ARATH4.395e-5973.51Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA... [more]
CAHX_FLABI2.412e-5770.86Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2[more]
CAHX_FLAPR9.164e-5770.20Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1[more]
CAHX_FLABR9.164e-5770.20Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1[more]
CAH1_FLALI9.164e-5770.20Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=... [more]
CAH2_FLALI4.257e-5467.55Carbonic anhydrase 2 (Fragment) OS=Flaveria linear... [more]

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Properties
Property NameValue
Genbank descriptionC07011D05SK SaltLeaf1 Citrus clementina cDNA clone C07011D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300536 ID=CX300536; Name=CX300536; organism=Citrus clementina; type=EST; length=664bp
GTTGGATTTTCAACCTGGGGAAGCTTTCGTGGTTCGCAATGTTGCTAACA
TTGTTCCACCCTATGATCAGACTAAATATGCTGGAGTTGGAGCTGCTGTC
GAGTATGCAGTTTTGCATCTCAAGGTTTCAAACATTGTGGTCATTGGGCA
CAGCGCCTGTGGTGGCATCAAAGGACTCATGTCTTTCACATTTGATGGAA
ACAACTCCACCGATTTCATTGAAGACTGGGTGAAAATTGGCATCCCTGCC
AAGTCTAAGGTGTTAACAGAGCATGGTGACAAGCCTTTTGGAGACCAATG
CACATACTGTGAAAAGGAGGCGGTGAATGTGTCCCTCAGTAATCTGCTAA
CGTATCCATTTGTGAGAGAAGGCTTGGTGAACAAAACTCTGGCACTCAAG
GGTGGTTACTATGATTTCGTTAATGGATCATTCGAGCTCTGGGGTCTCGA
CTTTAGCCTTTCTCCTCCACTCTCCGTATGAACATCAACCGATATATGAT
ATCAGTGACCTCATCTTTGTTCTCTTTATTACCATGTGATCTACTTTTAT
CTCCCTTTCTTCCCATGTGTACTCTTGTATGTTTTATTGAGCTGCAATTT
ACAATAAACTTACGATGAACATCGGCTTCTACTTCTTTTAACATAAATGG
ACAGTGAAATTTCC
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