CX300541

Overview
NameCX300541
Unique NameCX300541
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length419
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX300541 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 6.036e-15
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 3 
Query:    3 RSWAPDRQERFICRWVDALSDP 68
            RSWAPDRQERFICRWVDALSDP
Sbjct:  436 RSWAPDRQERFICRWVDALSDP 457

HSP 2 Score: 43.8986 bits (102), Expect = 6.036e-15
Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 1 
Query:   70 RVTHEIRHIWISYWSQACKSLGHEV 144
            RVTHEIR IW SYWSQA K+LG ++
Sbjct:  458 RVTHEIRSIWFSYWSQADKTLGQKI 482

HSP 3 Score: 22.7126 bits (47), Expect = 6.036e-15
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 2 
Query:  140 KLASRLNVRPNI 175
            K+ASRLNVRP +
Sbjct:  481 KIASRLNVRPTM 492
[Close]
BLAST of CX300541 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 50.447 bits (119), Expect = 3.660e-14
Identity = 21/22 (95.45%), Postives = 21/22 (95.45%), Query Frame = 3 
Query:    3 RSWAPDRQERFICRWVDALSDP 68
            RSWA DRQERFICRWVDALSDP
Sbjct:  436 RSWAADRQERFICRWVDALSDP 457

HSP 2 Score: 44.669 bits (104), Expect = 3.660e-14
Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 
Query:   70 RVTHEIRHIWISYWSQACKSLGHEV 144
            RVTHEIR IWISYWSQA KS+G ++
Sbjct:  458 RVTHEIRSIWISYWSQADKSVGQKL 482

HSP 3 Score: 22.3274 bits (46), Expect = 3.660e-14
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 2 
Query:  140 KLASRLNVRPNI 175
            KLAS LNVRP+I
Sbjct:  481 KLASLLNVRPSI 492
[Close]
BLAST of CX300541 vs. ExPASy Swiss-Prot
Match: CATA_SOLAP (Catalase OS=Soldanella alpina PE=2 SV=1)

HSP 1 Score: 48.1358 bits (113), Expect = 7.917e-14
Identity = 19/22 (86.36%), Postives = 22/22 (100.00%), Query Frame = 3 
Query:    3 RSWAPDRQERFICRWVDALSDP 68
            R++APDRQERF+CRWVDALSDP
Sbjct:  436 RTFAPDRQERFVCRWVDALSDP 457

HSP 2 Score: 44.669 bits (104), Expect = 7.917e-14
Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 
Query:   70 RVTHEIRHIWISYWSQACKSLGHEV 144
            RVTHEIR IWISYW+QA KSLG ++
Sbjct:  458 RVTHEIRSIWISYWTQADKSLGQKL 482

HSP 3 Score: 23.483 bits (49), Expect = 7.917e-14
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 2 
Query:  140 KLASRLNVRPNI 175
            KLASRLNVRP +
Sbjct:  481 KLASRLNVRPTM 492
[Close]
BLAST of CX300541 vs. ExPASy Swiss-Prot
Match: CATA_PHAAU (Catalase OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 47.7506 bits (112), Expect = 1.024e-13
Identity = 20/22 (90.91%), Postives = 21/22 (95.45%), Query Frame = 3 
Query:    3 RSWAPDRQERFICRWVDALSDP 68
            RSWAPDRQ+RFI RWVDALSDP
Sbjct:  436 RSWAPDRQDRFIRRWVDALSDP 457

HSP 2 Score: 45.0542 bits (105), Expect = 1.024e-13
Identity = 18/25 (72.00%), Postives = 22/25 (88.00%), Query Frame = 1 
Query:   70 RVTHEIRHIWISYWSQACKSLGHEV 144
            RVTHEIR +WISYWSQA +SLG ++
Sbjct:  458 RVTHEIRSVWISYWSQADRSLGQKI 482

HSP 3 Score: 23.0978 bits (48), Expect = 1.024e-13
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 2 
Query:  140 KLASRLNVRPNI 175
            K+AS LN+RPNI
Sbjct:  481 KIASHLNMRPNI 492
[Close]
BLAST of CX300541 vs. ExPASy Swiss-Prot
Match: CATA1_CUCPE (Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 SV=1)

HSP 1 Score: 44.669 bits (104), Expect = 1.336e-12
Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 
Query:   70 RVTHEIRHIWISYWSQACKSLGHEV 144
            RVTHEIR IWISYWSQA +SLG ++
Sbjct:  458 RVTHEIRSIWISYWSQADRSLGQKL 482

HSP 2 Score: 44.2838 bits (103), Expect = 1.336e-12
Identity = 18/21 (85.71%), Postives = 19/21 (90.48%), Query Frame = 3 
Query:    3 RSWAPDRQERFICRWVDALSD 65
            RSW PDRQERF+ RWVDALSD
Sbjct:  436 RSWTPDRQERFVRRWVDALSD 456

HSP 3 Score: 23.0978 bits (48), Expect = 1.336e-12
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 2 
Query:  140 KLASRLNVRPNI 175
            KLAS LNVRP+I
Sbjct:  481 KLASHLNVRPSI 492
[Close]
BLAST of CX300541 vs. ExPASy Swiss-Prot
Match: CATA2_RICCO (Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=2 SV=1)

HSP 1 Score: 44.2838 bits (103), Expect = 1.726e-12
Identity = 18/22 (81.82%), Postives = 21/22 (95.45%), Query Frame = 3 
Query:    3 RSWAPDRQERFICRWVDALSDP 68
            RSWAPDRQERF+CR V+ALS+P
Sbjct:  436 RSWAPDRQERFLCRLVNALSEP 457

HSP 2 Score: 40.4318 bits (93), Expect = 1.726e-12
Identity = 15/25 (60.00%), Postives = 21/25 (84.00%), Query Frame = 1 
Query:   70 RVTHEIRHIWISYWSQACKSLGHEV 144
            R+THEIR IW+S+W+Q  KSLG ++
Sbjct:  458 RITHEIRSIWVSWWTQCDKSLGQKL 482

HSP 3 Score: 26.9498 bits (58), Expect = 1.726e-12
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 2 
Query:  140 KLASRLNVRPNI 175
            KLASRLNVRPNI
Sbjct:  481 KLASRLNVRPNI 492
[Close]
BLAST of CX300541 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 46.595 bits (109), Expect = 2.231e-12
Identity = 20/25 (80.00%), Postives = 22/25 (88.00%), Query Frame = 1 
Query:   70 RVTHEIRHIWISYWSQACKSLGHEV 144
            RVTHEIR IWISYWSQA KSLG ++
Sbjct:  458 RVTHEIRSIWISYWSQADKSLGQKI 482

HSP 2 Score: 40.4318 bits (93), Expect = 2.231e-12
Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 3 
Query:    3 RSWAPDRQERFICRWVDALSDP 68
            RS++ DRQERFI RW+DALSDP
Sbjct:  436 RSFSADRQERFINRWIDALSDP 457

HSP 3 Score: 24.2534 bits (51), Expect = 2.231e-12
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 2 
Query:  140 KLASRLNVRPNI 175
            K+ASRLNVRP+I
Sbjct:  481 KIASRLNVRPSI 492
[Close]
BLAST of CX300541 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 45.4394 bits (106), Expect = 2.883e-12
Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 
Query:   70 RVTHEIRHIWISYWSQACKSLGHEV 144
            R+THEIR IWISYWSQA KSLG ++
Sbjct:  458 RITHEIRSIWISYWSQADKSLGQKL 482

HSP 2 Score: 40.4318 bits (93), Expect = 2.883e-12
Identity = 16/22 (72.73%), Postives = 20/22 (90.91%), Query Frame = 3 
Query:    3 RSWAPDRQERFICRWVDALSDP 68
            R++ P+RQERFI RW+DALSDP
Sbjct:  436 RTFTPERQERFIQRWIDALSDP 457

HSP 3 Score: 25.0238 bits (53), Expect = 2.883e-12
Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 2 
Query:  140 KLASRLNVRPNI 175
            KLASRLNVRP+I
Sbjct:  481 KLASRLNVRPSI 492
[Close]
BLAST of CX300541 vs. ExPASy Swiss-Prot
Match: CATA3_ARATH (Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV=3)

HSP 1 Score: 43.1282 bits (100), Expect = 3.726e-12
Identity = 18/25 (72.00%), Postives = 22/25 (88.00%), Query Frame = 1 
Query:   70 RVTHEIRHIWISYWSQACKSLGHEV 144
            R+THEIR IWISYWSQA +SLG ++
Sbjct:  458 RLTHEIRGIWISYWSQADRSLGQKL 482

HSP 2 Score: 42.3578 bits (98), Expect = 3.726e-12
Identity = 16/22 (72.73%), Postives = 20/22 (90.91%), Query Frame = 3 
Query:    3 RSWAPDRQERFICRWVDALSDP 68
            RSWAPDRQ+RF+ RWV+ LS+P
Sbjct:  436 RSWAPDRQDRFVKRWVEILSEP 457

HSP 3 Score: 25.0238 bits (53), Expect = 3.726e-12
Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 2 
Query:  140 KLASRLNVRPNI 175
            KLASRLNVRP+I
Sbjct:  481 KLASRLNVRPSI 492
[Close]
BLAST of CX300541 vs. ExPASy Swiss-Prot
Match: CATA3_CUCPE (Catalase isozyme 3 OS=Cucurbita pepo GN=CAT3 PE=2 SV=1)

HSP 1 Score: 42.3578 bits (98), Expect = 3.726e-12
Identity = 17/25 (68.00%), Postives = 22/25 (88.00%), Query Frame = 1 
Query:   70 RVTHEIRHIWISYWSQACKSLGHEV 144
            RVT E+R+IWISYWSQA +SLG ++
Sbjct:  458 RVTDEVRNIWISYWSQADRSLGQKI 482

HSP 2 Score: 41.9726 bits (97), Expect = 3.726e-12
Identity = 17/22 (77.27%), Postives = 21/22 (95.45%), Query Frame = 3 
Query:    3 RSWAPDRQERFICRWVDALSDP 68
            RSWAPDRQ+RF+ R+V+ALSDP
Sbjct:  436 RSWAPDRQDRFVKRFVEALSDP 457

HSP 3 Score: 26.1794 bits (56), Expect = 3.726e-12
Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 2 
Query:  140 KLASRLNVRPNI 175
            K+ASRLNVRPNI
Sbjct:  481 KIASRLNVRPNI 492
The following BLAST results are available for this feature:
BLAST of CX300541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
CATA3_NICPL6.036e-15100.00Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN... [more]
CATA1_GOSHI3.660e-1495.45Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P... [more]
CATA_SOLAP7.917e-1486.36Catalase OS=Soldanella alpina PE=2 SV=1[more]
CATA_PHAAU1.024e-1390.91Catalase OS=Phaseolus aureus PE=2 SV=1[more]
CATA1_CUCPE1.336e-1276.00Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 ... [more]
CATA2_RICCO1.726e-1281.82Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=... [more]
CATA2_GOSHI2.231e-1280.00Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P... [more]
CATA2_ARATH2.883e-1276.00Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV... [more]
CATA3_ARATH3.726e-1272.00Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV... [more]
CATA3_CUCPE3.726e-1268.00Catalase isozyme 3 OS=Cucurbita pepo GN=CAT3 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC07011D11SK SaltLeaf1 Citrus clementina cDNA clone C07011D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300541 ID=CX300541; Name=CX300541; organism=Citrus clementina; type=EST; length=419bp
ACCGATCTTGGGCACCAGACAGGCAAGAGCGATTCATCTGCAGATGGGTT
GATGCTTTATCTGATCCAACGCGTCACCCATGAGATCCGCCACATATGGA
TCTCATACTGGTCTCAGGCTTGCAAGTCTCTGGGTCATGAAGTTGGCATC
TCGTCTGAATGTGAGGCCTAACATTTAATGGTGATGCGGAGCTGAGTGAT
TTAGAAAGAGTTAGCAAGGAGTAAACACAGAGGACGTCAGCAGTTTAAGG
AATGCGAATTCGTTTTCGGGTGGTGTGTTATTTTGTAATACTAAAAAAAA
CATGTTGGTCCTGTAATTCATAAACATGATGTTCCTTAAAATAAATGCTG
GTTGTACGCTCAAAATTTGTATAAAGTACAATCATATTAGTACTTTTCTG
TTAAAAAAAATAAAAAAAA
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