CX300549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.366e-18 Identity = 41/44 (93.18%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF P K Sbjct: 222 FSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.366e-18 Identity = 41/44 (93.18%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF P K Sbjct: 224 FSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.366e-18 Identity = 41/44 (93.18%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF P K Sbjct: 224 FSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.366e-18 Identity = 41/44 (93.18%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF P K Sbjct: 222 FSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 8.366e-18 Identity = 41/44 (93.18%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF P K Sbjct: 218 FSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 261
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.366e-18 Identity = 41/44 (93.18%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF P K Sbjct: 163 FSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 206
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 8.366e-18 Identity = 41/44 (93.18%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF P K Sbjct: 222 FSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.366e-18 Identity = 41/44 (93.18%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF P K Sbjct: 212 FSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 255
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.093e-17 Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFF+QAIVTGKGPLENLADHL DPVNNNAW+YATNF PRK Sbjct: 224 FSMFGFFIQAIVTGKGPLENLADHLVDPVNNNAWSYATNFVPRK 267
BLAST of CX300549 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.427e-17 Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 2 FSTFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFCPRK 133 FS FGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNF P K Sbjct: 231 FSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274 The following BLAST results are available for this feature:
BLAST of CX300549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300549 ID=CX300549; Name=CX300549; organism=Citrus clementina; type=EST; length=263bpback to top |