CX300567
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300567 vs. ExPASy Swiss-Prot
Match: PAP_CITUN (Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu GN=PAP PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 8.209e-59 Identity = 125/160 (78.12%), Postives = 131/160 (81.88%), Query Frame = 2 Query: 2 NPTPAPTEALTLLNAKRILVYTSFSGLFPLLSRGTLPLARVEELSQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPETG*ILGTKELISHPLKAYSLQSKTQLHLLQRPFLANHLLKFSISNSNA*SWLLT 481 NPTPAPTEALTLLNAK ILVYTSFSGLFPLLSRGTLPLARVEE+SQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPE LG K +S P K + + + + LKFSISNSNA SWLLT Sbjct: 135 NPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPENVEFLGQKIDLS-PFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLT 293
BLAST of CX300567 vs. ExPASy Swiss-Prot
Match: LIPC_SOLTU (Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 205.297 bits (521), Expect = 1.148e-52 Identity = 110/160 (68.75%), Postives = 124/160 (77.50%), Query Frame = 2 Query: 2 NPTPAPTEALTLLNAKRILVYTSFSGLFPLLSRGTLPLARVEELSQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPETG*ILGTKELISHPLKAYSLQSKTQLHLLQRPFLANHLLKFSISNSNA*SWLLT 481 NP PAPTEALTLLN K IL YTSFSGLFPLLSRG LPL RVEE+SQTIDSE+FTVQNS+ FAGPLATTSISTNAKFEVRSPKRVQIKFEEG+IGTPQ+TDS+VLPE LG K +S P K + + + + +KF I+N+NA SWLLT Sbjct: 138 NPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIVLPENVEFLGQKIDLS-PFKGLITSVQDTASSVAKSISSQPPIKFPITNNNAQSWLLT 296
BLAST of CX300567 vs. ExPASy Swiss-Prot
Match: LIPC_SOLDE (Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 1.148e-52 Identity = 110/160 (68.75%), Postives = 124/160 (77.50%), Query Frame = 2 Query: 2 NPTPAPTEALTLLNAKRILVYTSFSGLFPLLSRGTLPLARVEELSQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPETG*ILGTKELISHPLKAYSLQSKTQLHLLQRPFLANHLLKFSISNSNA*SWLLT 481 NP PAPTEALTLLN K IL YTSFSGLFPLLSRG LPL RVEE+SQTIDSE+FTVQNS+ FAGPLATTSISTNAKFEVRSPKRVQIKFEEG+IGTPQ+TDS+VLPE LG K +S P K + + + + +KF I+N+NA SWLLT Sbjct: 138 NPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIVLPENVEFLGQKIDVS-PFKGLITSVQDTASSVVKSISSQPPIKFPITNNNAQSWLLT 296
BLAST of CX300567 vs. ExPASy Swiss-Prot
Match: PAP2_BRACM (Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris GN=PAP2 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.112e-47 Identity = 100/160 (62.50%), Postives = 121/160 (75.62%), Query Frame = 2 Query: 2 NPTPAPTEALTLLNAKRILVYTSFSGLFPLLSRGTLPLARVEELSQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPETG*ILGTKELISHPLKAYSLQSKTQLHLLQRPFLANHLLKFSISNSNA*SWLLT 481 NPTPAPT+AL LLN K IL YTSF GLFPLLSRG +PL +V+E+SQTIDS+NFTV+NS+ FAGPLATTSISTNAKFE+RSPKRVQIKFEEGVIGTPQ+TDS+ +PE LG K ++ P++ + + R + LKFS+ +A SWLLT Sbjct: 131 NPTPAPTDALFLLNGKWILAYTSFVGLFPLLSRGIVPLVKVDEISQTIDSDNFTVENSVLFAGPLATTSISTNAKFEIRSPKRVQIKFEEGVIGTPQLTDSIEIPEYVEFLGQKIDLT-PIRGLLTSVQDTATSVARTISSQPPLKFSLPGDSAQSWLLT 289
BLAST of CX300567 vs. ExPASy Swiss-Prot
Match: PAP2_ARATH (Probable plastid-lipid-associated protein 2, chloroplastic OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.452e-47 Identity = 99/160 (61.88%), Postives = 120/160 (75.00%), Query Frame = 2 Query: 2 NPTPAPTEALTLLNAKRILVYTSFSGLFPLLSRGTLPLARVEELSQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPETG*ILGTKELISHPLKAYSLQSKTQLHLLQRPFLANHLLKFSISNSNA*SWLLT 481 NPTPAPTEAL LLN K IL YTSF LFPLLSRG +PL +V+E+SQTIDS+NFTVQNS++FAGPL T SISTNAKFE+RSPKRVQIKFE+GVIGTPQ+TDS+ +PE +LG K + +P++ + + R + LKFS+ NA SWLLT Sbjct: 122 NPTPAPTEALFLLNGKWILAYTSFVNLFPLLSRGIVPLIKVDEISQTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPEYVEVLGQK-IDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSWLLT 280
BLAST of CX300567 vs. ExPASy Swiss-Prot
Match: PAP2_ORYSJ (Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PAP2 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 3.236e-47 Identity = 103/161 (63.98%), Postives = 118/161 (73.29%), Query Frame = 2 Query: 2 NPTPAPTEALTLLNAKRILVYTSFSGLFPLLSRGTLP-LARVEELSQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPETG*ILGTKELISHPLKAYSLQSKTQLHLLQRPFLANHLLKFSISNSNA*SWLLT 481 NPTPAPTEALTLLN K IL YTSFS LFPLL G+LP L +VEE+SQTIDSENFTVQN I+F+GPLATTS+STNAKFEVRSPKRVQIKF+EG+IGTPQ+TDS+VLPE + G + + PLK + + R LK I NA SWLLT Sbjct: 131 NPTPAPTEALTLLNGKWILAYTSFSQLFPLLGSGSLPQLVKVEEISQTIDSENFTVQNCIKFSGPLATTSVSTNAKFEVRSPKRVQIKFDEGIIGTPQLTDSIVLPEKFELFG-QNIDLTPLKGIFSSIENAASSVARTISGQPPLKIPIRTDNAESWLLT 290
BLAST of CX300567 vs. ExPASy Swiss-Prot
Match: CHRC_CUCSA (Chromoplast-specific carotenoid-associated protein, chromoplast OS=Cucumis sativus GN=CHRC PE=1 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 9.415e-47 Identity = 101/160 (63.12%), Postives = 119/160 (74.38%), Query Frame = 2 Query: 2 NPTPAPTEALTLLNAKRILVYTSFSGLFPLLSRGTLPLARVEELSQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPETG*ILGTKELISHPLKAYSLQSKTQLHLLQRPFLANHLLKFSISNSNA*SWLLT 481 NPTPAPTEALTLLN K IL YT+F+GLFPLLSR LPL +VEE+SQTIDSEN TVQNS+QF+GPLATTSI+TNAKFEVRSP RV IKFEEGVIGTPQ+TDS+V+P+ LG K + P + + + + +KFSISN+ SWLLT Sbjct: 135 NPTPAPTEALTLLNGKWILAYTTFAGLFPLLSRN-LPLVKVEEISQTIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTDSIVIPDNVDFLGQK-IDFTPFNGIISSLQDTASNVAKTISSQPPIKFSISNTRVESWLLT 292
BLAST of CX300567 vs. ExPASy Swiss-Prot
Match: PAP1_ARATH (Probable plastid-lipid-associated protein 1, chloroplastic OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 7.970e-46 Identity = 96/160 (60.00%), Postives = 118/160 (73.75%), Query Frame = 2 Query: 2 NPTPAPTEALTLLNAKRILVYTSFSGLFPLLSRGTLPLARVEELSQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPETG*ILGTKELISHPLKAYSLQSKTQLHLLQRPFLANHLLKFSISNSNA*SWLLT 481 NPTPAP EAL LLN K IL YTSF GLFPLLSR PL +V+E+SQTIDS++FTVQNS++FAGP +TTS STNAKFE+RSPKRVQIKFE+GVIGTPQ+TDS+ +PE+ +LG K + +P+K + + R LKFS+ + N SWLLT Sbjct: 130 NPTPAPNEALFLLNGKWILAYTSFVGLFPLLSRRIEPLVKVDEISQTIDSDSFTVQNSVRFAGPFSTTSFSTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPESVEVLGQK-IDLNPIKGLLTSVQDTASSVARTISNQPPLKFSLPSDNTQSWLLT 288
BLAST of CX300567 vs. ExPASy Swiss-Prot
Match: PAP1_BRACM (Plastid lipid-associated protein 1, chloroplastic OS=Brassica campestris GN=PAP1 PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 2.319e-45 Identity = 96/160 (60.00%), Postives = 118/160 (73.75%), Query Frame = 2 Query: 2 NPTPAPTEALTLLNAKRILVYTSFSGLFPLLSRGTLPLARVEELSQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPETG*ILGTKELISHPLKAYSLQSKTQLHLLQRPFLANHLLKFSISNSNA*SWLLT 481 NP PAP EAL LLN K ILVYTSF GLFPLLSR PL +V+E+SQTIDS++FTV NS++FA PLATTS+STNAKFEVRSPKRVQ+KFE+GVIGTPQ+TDS+ +PE +LG K + +P+K + + R + LKFS+ +A SWLLT Sbjct: 139 NPNPAPNEALFLLNGKWILVYTSFVGLFPLLSRRISPLVKVDEISQTIDSDSFTVHNSVRFASPLATTSLSTNAKFEVRSPKRVQVKFEQGVIGTPQLTDSIEIPEFVEVLGQK-IDLNPIKGLLTSVQDTASSVARTISSQPPLKFSLPGDSAQSWLLT 297
BLAST of CX300567 vs. ExPASy Swiss-Prot
Match: PG1_PEA (Plastoglobulin-1, chloroplastic OS=Pisum sativum GN=PG1 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 7.015e-26 Identity = 65/160 (40.62%), Postives = 94/160 (58.75%), Query Frame = 2 Query: 2 NPTPAPTEALTLLNAKRILVYTSFSGLFPLLSRGTLPLARVEELSQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPETG*ILGTKELISHPLKAYSLQSKTQLHLLQRPFLANHLLKFSISNSNA*SWLLT 481 NPTPAP E LLN +L+YT+ S L PLL+ G+LPL +++++SQTID+++FTV NS + P A+ S S +A FEVRSP R+Q+ F+EG + P++ + LPE I G ++L PL + + + R LK I SWL+T Sbjct: 171 NPTPAPVEEPDLLNGNWVLLYTASSELLPLLAAGSLPLLKLDKISQTIDTDSFTVVNSTTLSSPFASFSFSVSASFEVRSPTRIQVTFKEGSLQPPEIKSKIDLPENINIFG-QQLSLGPLLQSLGPLENVVANISRVISGQSPLKIPIPGERTSSWLIT 329 The following BLAST results are available for this feature:
BLAST of CX300567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300567 ID=CX300567; Name=CX300567; organism=Citrus clementina; type=EST; length=483bpback to top |