CX300593

Overview
NameCX300593
Unique NameCX300593
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig19 contig Ccv1_Contig19:87..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_ORYSJ (Cyanate hydratase OS=Oryza sativa subsp. japonica GN=CYN PE=2 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 2.179e-51
Identity = 98/138 (71.01%), Postives = 111/138 (80.43%), Query Frame = 3
Query:    6 ESGKSFNQIAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIRSYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPYSEQKSEHM 419
            ES KSF++I EE GLTNVYVAQLL+RQAQLKPETAP LRAA+P L D+L+  MM PP RSY P+++ EP +YRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCS              +TFDGKYLPYSEQ+S+HM
Sbjct:   22 ESRKSFSEIGEEAGLTNVYVAQLLRRQAQLKPETAPALRAAVPGLTDDLVALMMEPPFRSYHPDIVHEPAIYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSVDKVQGADGKDRVVVTFDGKYLPYSEQRSDHM 159          
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_ARATH (Cyanate hydratase OS=Arabidopsis thaliana GN=CYN PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.179e-51
Identity = 99/137 (72.26%), Postives = 113/137 (82.48%), Query Frame = 3
Query:    9 SGKSFNQIAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIRSYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPYSEQKSEHM 419
            SGK+F+Q+A ETGLTNVYVAQLL+RQAQLKP+T PKL+ ALP L DELI +MM PP RSYDPNLIQEPT+YRLNEAVMHFGESIKEIINE+FGDGIMSAIDFYCS              +T DGKYL +SEQ++E+M
Sbjct:   20 SGKTFSQLAAETGLTNVYVAQLLRRQAQLKPDTVPKLKEALPALTDELIGDMMSPPWRSYDPNLIQEPTIYRLNEAVMHFGESIKEIINEDFGDGIMSAIDFYCSVDKIKGVDGNNRVVVTLDGKYLSHSEQRTENM 156          
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_PSESM (Cyanate hydratase OS=Pseudomonas syringae pv. tomato GN=cynS PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14
Identity = 43/122 (35.25%), Postives = 69/122 (56.56%), Query Frame = 3
Query:   30 IAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIRSYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPY 395
            +AE+TGL+ VYV   L  Q  L P+   ++ A    L  + + E+   P+R +  ++  +PT+YR +E V  +G ++K +++E+FGDGI+SAI+F                 IT DGK+LPY
Sbjct:   32 LAEDTGLSVVYVTAALLGQHPL-PQAVAEVVAERLGLDRDAVVELQTIPLRGHVEDVSSDPTIYRFHEMVQVYGTTLKALVHEQFGDGIISAINFKLDIRKVEDPEGGERAVITLDGKFLPY 152          
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_MARMS (Cyanate hydratase OS=Marinomonas sp. (strain MWYL1) GN=cynS PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14
Identity = 47/131 (35.88%), Postives = 70/131 (53.44%), Query Frame = 3
Query:    3 RESGKSFNQIAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIRSYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPY 395
            +E   ++  IA+  G+T+V++            E A KL A L  LP E    +M  P +++D  + Q+P +YRL E V  +G ++KE+I E+FGDGIMSAIDF                 +T +GK+LPY
Sbjct:   15 KEKNLTWEAIADAVGMTDVWITSACLGMNSCTEEVAEKLVAFLG-LPAEAKSVLMEYPTKTWDEAIPQDPLIYRLYEVVGVYGPTLKEVIQEKFGDGIMSAIDF-SMKVDKEENPKGDRVILTMNGKFLPY 143          
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_TERTT (Cyanate hydratase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=cynS PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.745e-14
Identity = 47/131 (35.88%), Postives = 70/131 (53.44%), Query Frame = 3
Query:    3 RESGKSFNQIAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIRSYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPY 395
            +E   ++  IA E G+  V+V         +    A KL A L ELP+     +M  P +++D  + Q+P +YRL E V  +G+++KE+I E+FGDGIMSAIDF                 +T +GK+LPY
Sbjct:   15 KERNLTWEGIAAELGMGTVWVTSACLGMNSMPEAVAEKLCAYL-ELPEGAKAALMEYPTKAWDKEVPQDPLIYRLYEVVGVYGDTLKEVIQEKFGDGIMSAIDF-TMDVAKEENPKGDRVVLTLNGKFLPY 143          
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_SYNY3 (Cyanate hydratase OS=Synechocystis sp. (strain PCC 6803) GN=cynS PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 44/133 (33.08%), Postives = 71/133 (53.38%), Query Frame = 3
Query:    3 RESGKSFNQIAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIRSYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPYSE 401
            +  G +F  + +  G   V++A ++ RQA    + A KL   L  L D+L+ E+  P ++   P +  +P +YR  E +  +G  +KE+I+E+FGDGIMSAIDF                 +T +GK+LPY +
Sbjct:   18 KAKGITFADLEQLLGRDEVWIAAVIYRQASASVDEAEKLLHCLG-LSDDLVPELTAPSVKGLGPVVPTDPLIYRFYEIMQVYGMPMKEVIHEKFGDGIMSAIDFTLD-IEKEADPKGDRVKVTMNGKFLPYKK 148          
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_PSE14 (Cyanate hydratase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=cynS PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 44/122 (36.07%), Postives = 67/122 (54.92%), Query Frame = 3
Query:   30 IAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIRSYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPY 395
            +AE TGL+ VYV   L  Q  L PE   ++ A    L  + + E+   P+R    ++  +PT+YR +E V  +G ++K +++E+FGDGI+SAI+F                 IT DGK+LPY
Sbjct:   32 LAEGTGLSVVYVTAALLGQHPL-PEAVAEVVAERLGLDRDAVAELQTIPLRGNVEDVSSDPTIYRFHEMVQVYGTTLKALVHEQFGDGIISAINFKLDIKKVEDPEGGERAVITLDGKFLPY 152          
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_ACAM1 (Cyanate hydratase OS=Acaryochloris marina (strain MBIC 11017) GN=cynS PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13
Identity = 47/134 (35.07%), Postives = 70/134 (52.24%), Query Frame = 3
Query:    3 RESGKSFNQIAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIR-SYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPYSE 401
            +  G SF  + +  G    ++A ++ RQA    E A K+  AL  LP EL   +  PP++ S +P +  +P VYR  E +  +G  +K +I+E+FGDGIMSAIDF                 +T  GK+LPY +
Sbjct:   15 KAKGISFEDLEKIVGCDETWIASVIYRQASASTEEAEKIVTALG-LPAELAEPLTVPPMKGSLEPVIPTDPLVYRFYEIMQVYGVPVKAVIHEKFGDGIMSAIDFSIE-VDKVPDPKGDRVQVTMCGKFLPYKK 146          
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_PSEU2 (Cyanate hydratase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=cynS PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.381e-13
Identity = 43/122 (35.25%), Postives = 67/122 (54.92%), Query Frame = 3
Query:   30 IAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIRSYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPY 395
            +AE TGL+ VYV   L  Q  L P+   ++ A    L  + + E+   P+R    ++  +PT+YR +E V  +G ++K +++E+FGDGI+SAI+F                 IT DGK+LPY
Sbjct:   32 LAEGTGLSVVYVTAALLGQHPL-PQAVAEVVAERLGLDRDAVAELQTIPLRGNVEDVSSDPTIYRFHEMVQVYGTTLKALVHEQFGDGIISAINFKLDIKKVDDPEGGERAVITLDGKFLPY 152          
BLAST of CX300593 vs. ExPASy Swiss-Prot
Match: CYNS_BURTA (Cyanate hydratase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=cynS PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.803e-13
Identity = 46/126 (36.51%), Postives = 67/126 (53.17%), Query Frame = 3
Query:   18 SFNQIAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALPELPDELIHEMMRPPIRSYDPNLIQ-EPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSXXXXXXXXXXXXXXITFDGKYLP 392
            +F QI E TGL+  +    L  Q  L P  A ++ AA  +L D+ +  +   P+R   P  +  +PT+YR  E V  +G ++K +I+E+FGDGI+SAI+F                 IT DGKYLP
Sbjct:   28 TFEQINEGTGLSVAFTTAALLGQHPL-PADAARVVAAKLDLDDDAVRLLQTIPVRGSIPGGVPTDPTIYRFYEIVQVYGSTLKALIHEQFGDGIISAINFKLDIKKVDDPDGGSRAVITLDGKYLP 152          
The following BLAST results are available for this feature:
BLAST of CX300593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
CYNS_ORYSJ2.179e-5171.01Cyanate hydratase OS=Oryza sativa subsp. japonica ... [more]
CYNS_ARATH2.179e-5172.26Cyanate hydratase OS=Arabidopsis thaliana GN=CYN P... [more]
CYNS_PSESM2.130e-1435.25Cyanate hydratase OS=Pseudomonas syringae pv. toma... [more]
CYNS_MARMS2.782e-1435.88Cyanate hydratase OS=Marinomonas sp. (strain MWYL1... [more]
CYNS_TERTT4.745e-1435.88Cyanate hydratase OS=Teredinibacter turnerae (stra... [more]
CYNS_SYNY36.197e-1433.08Cyanate hydratase OS=Synechocystis sp. (strain PCC... [more]
CYNS_PSE146.197e-1436.07Cyanate hydratase OS=Pseudomonas syringae pv. phas... [more]
CYNS_ACAM11.057e-1335.07Cyanate hydratase OS=Acaryochloris marina (strain ... [more]
CYNS_PSEU21.381e-1335.25Cyanate hydratase OS=Pseudomonas syringae pv. syri... [more]
CYNS_BURTA1.803e-1336.51Cyanate hydratase OS=Burkholderia thailandensis (s... [more]

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Properties
Property NameValue
Genbank descriptionC07012A09SK SaltLeaf1 Citrus clementina cDNA clone C07012A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300593 ID=CX300593; Name=CX300593; organism=Citrus clementina; type=EST; length=699bp
GGCGAGAATCCGGTAAGTCATTTAATCAGATTGCAGAAGAGACAGGGCTG
ACAAACGTCTACGTTGCGCAGCTACTCAAACGCCAAGCGCAGCTCAAGCC
CGAAACTGCCCCCAAGCTACGGGCAGCCCTGCCCGAGCTGCCCGATGAGC
TTATTCACGAGATGATGAGACCGCCAATAAGATCGTATGACCCGAACTTG
ATCCAGGAACCCACCGTTTATAGGTTAAACGAAGCGGTTATGCATTTTGG
TGAGAGTATTAAGGAAATTATCAATGAGGAGTTTGGTGATGGCATCATGT
CGGCTATAGACTTCTACTGCTCTGTTGACAAAGTTAAAGGTGTGGATGGG
AAAGATCGTGTGGTCATTACTTTTGATGGAAAATATTTACCTTATAGTGA
GCAGAAGTCGGAGCACATGGTTTCAAGACTACAACAGCAGTGAAGTTAAT
CCATTTCCTACCTGGTGCAGATTCTATACACGCATAATACTTATTGTACG
AGTGAACTCCCTGGAGCTACCATAGTTGGATGCTTCATGGCCTGTGCTTT
GTAATGTAAAGATAATTGTTTGTGCAAGTGCGCGCGCAGGGTCTTGTGTG
ATATTCCCAGCATTAAATGCCATATTCGGGAAGAGCTACTATTGCCATCC
GCATATGGCCTATCTGTGTTATTGTTTTTGACCATTTTCACATCTGAAT
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