CX300606
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300606 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.689e-18 Identity = 41/42 (97.62%), Postives = 42/42 (100.00%), Query Frame = 2 Query: 29 LFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 154 +FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 224 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
BLAST of CX300606 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.689e-18 Identity = 41/42 (97.62%), Postives = 42/42 (100.00%), Query Frame = 2 Query: 29 LFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 154 +FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 226 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
BLAST of CX300606 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.689e-18 Identity = 41/42 (97.62%), Postives = 42/42 (100.00%), Query Frame = 2 Query: 29 LFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 154 +FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 226 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
BLAST of CX300606 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.689e-18 Identity = 41/42 (97.62%), Postives = 42/42 (100.00%), Query Frame = 2 Query: 29 LFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 154 +FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 224 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
BLAST of CX300606 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.689e-18 Identity = 41/42 (97.62%), Postives = 42/42 (100.00%), Query Frame = 2 Query: 29 LFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 154 +FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 220 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 261
BLAST of CX300606 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.689e-18 Identity = 41/42 (97.62%), Postives = 42/42 (100.00%), Query Frame = 2 Query: 29 LFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 154 +FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 165 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 206
BLAST of CX300606 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.689e-18 Identity = 41/42 (97.62%), Postives = 42/42 (100.00%), Query Frame = 2 Query: 29 LFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 154 +FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 224 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
BLAST of CX300606 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.689e-18 Identity = 41/42 (97.62%), Postives = 42/42 (100.00%), Query Frame = 2 Query: 29 LFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 154 +FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 214 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 255
BLAST of CX300606 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.414e-18 Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 2 Query: 29 LFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 154 +FGFFVQAIVTGKGPL+NL DHLADPVNNNAWAYATNFVPGK Sbjct: 226 MFGFFVQAIVTGKGPLDNLVDHLADPVNNNAWAYATNFVPGK 267 HSP 2 Score: 22.7126 bits (47), Expect = 2.414e-18 Identity = 10/13 (76.92%), Postives = 10/13 (76.92%), Query Frame = 1 Query: 1 KNGRLAMFSTVWF 39 KNGRLAMFS F Sbjct: 217 KNGRLAMFSMFGF 229
BLAST of CX300606 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.880e-18 Identity = 40/42 (95.24%), Postives = 42/42 (100.00%), Query Frame = 2 Query: 29 LFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 154 +FGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK Sbjct: 233 MFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274 The following BLAST results are available for this feature:
BLAST of CX300606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300606 ID=CX300606; Name=CX300606; organism=Citrus clementina; type=EST; length=293bpback to top |