CX300608

Overview
NameCX300608
Unique NameCX300608
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length416
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX300608 vs. ExPASy Swiss-Prot
Match: PGR5_ARATH (Protein PROTON GRADIENT REGULATION 5, chloroplastic OS=Arabidopsis thaliana GN=PGR5 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.549e-35
Identity = 74/86 (86.05%), Postives = 81/86 (94.19%), Query Frame = 1 
Query:    4 RVARP-IRMQPMMGNINEGKGIFAPVVVLTRNIIGKKRFNQLRGKAIALHSQVITEFCKSIGADAKQRQGLIRLAKKNGERLGFLA 258
            RV+R  IR  PMM N+NEGKG+FAP+VV+TRN++GKKRFNQLRGKAIALHSQVITEFCKSIGADAKQRQGLIRLAKKNGERLGFLA
Sbjct:   48 RVSRKAIRAVPMMKNVNEGKGLFAPLVVVTRNLVGKKRFNQLRGKAIALHSQVITEFCKSIGADAKQRQGLIRLAKKNGERLGFLA 133
The following BLAST results are available for this feature:
BLAST of CX300608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PGR5_ARATH2.549e-3586.05Protein PROTON GRADIENT REGULATION 5, chloroplasti... [more]
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Properties
Property NameValue
Genbank descriptionC07012C01SK SaltLeaf1 Citrus clementina cDNA clone C07012C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300608 ID=CX300608; Name=CX300608; organism=Citrus clementina; type=EST; length=416bp
GTTAGAGTGGCAAGACCCATTAGAATGCAACCGATGATGGGGAACATTAA
TGAAGGCAAAGGCATTTTTGCTCCTGTTGTTGTTCTCACTCGTAATATCA
TTGGCAAGAAGAGGTTCAATCAGCTTAGAGGCAAAGCTATTGCCTTGCAT
TCTCAGGTAATTACTGAATTCTGCAAATCAATAGGAGCTGATGCAAAGCA
AAGGCAAGGCCTCATCCGTTTGGCTAAGAAGAATGGAGAAAGACTTGGCT
TCCTTGCATGATAAGAAAAACATTTATTGTTTTGTGTTGTTATCACCATG
AGATGTTTTAAGTTTATAGTTTTTTCAAGTGCTTTCTAATGTAAACATAC
TTTTCTTCAGCTGGGTGCGTCCCAGAAATAGAATGTAACCTAAGATTAAA
AAAAAAAAAAAAAAAA
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