CX300615

Overview
NameCX300615
Unique NameCX300615
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length504
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11911 contig Ccv1_Contig11911:628..1130. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX300615 vs. ExPASy Swiss-Prot
Match: NC2B_ARATH (Protein Dr1 homolog OS=Arabidopsis thaliana GN=DR1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.482e-11
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 1 
Query:   40 KRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHK 138
            KRTIAPEHVLKAL+VLGFGEYIEEVYAAYEQHK
Sbjct:   67 KRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHK 99
The following BLAST results are available for this feature:
BLAST of CX300615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NC2B_ARATH1.482e-1196.97Protein Dr1 homolog OS=Arabidopsis thaliana GN=DR1... [more]
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Properties
Property NameValue
Genbank descriptionC07012C08SK SaltLeaf1 Citrus clementina cDNA clone C07012C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300615 ID=CX300615; Name=CX300615; organism=Citrus clementina; type=EST; length=504bp
TGTTTCCTCTGAGTCCAATGAAGTTTGCAGCAGGGAGGAAAAAGAACAAT
TGCTCCCGAGCATGTACTCAAGGCTTTGGAGGTTCTTGGGTTTGGTGAGT
ACATCGAGGAGGTCTATGCTGCATACGAGCAACACAAGCTTTGAGACTTA
TGCAGGACTCGTTGAAAGGTGGCAAATGGAGCAATGGGGCCGAGATGACG
GAGGAAGAAGCAGCGGCTGAGCAGCAGAGAATGTTTGCTGAGGCACGTGC
ACGAATGAACGGTGGAGCCGCTGGCCCTCCCAAGCAACCGGACATTAACC
CAAGTTTAGAGAGCTAACTAACTATAGGACTTTTTAATTTTCTCCAGCCA
TAGGCAAGCATCCTTGACTCTTTCTGTTCTGCCTTTAGTCTCTTATATTA
TGTACAAAAAGCCTTTGTGAGTGCAGTAGCCTATGTGGATATGCACTTTC
ATTTGTACTTTATCTTATGGATCATTGTCTATAACTTAATGTAATTAGTG
AGCT
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