CX300616
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300616 vs. ExPASy Swiss-Prot
Match: TLP14_ORYSJ (Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica GN=TULP14 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.370e-22 Identity = 53/78 (67.95%), Postives = 55/78 (70.51%), Query Frame = 1 Query: 13 VTVASVKNFHLIXXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 246 VTVASVKNF L+ DHDK+ILQFGKV KDMFTMDYRYPLSAFQAFAICLSSFDTKLACE Sbjct: 368 VTVASVKNFQLVAATQPAAGAPTPSQPAPPPPPDHDKVILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
BLAST of CX300616 vs. ExPASy Swiss-Prot
Match: TLP13_ORYSJ (Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica GN=TULP13 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.119e-20 Identity = 51/78 (65.38%), Postives = 53/78 (67.95%), Query Frame = 1 Query: 13 VTVASVKNFHLIXXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 246 VTVASVKNF LI +HDK+ILQFGKV KDMFTMDY YPLSAFQAFAI LSSFDTKLACE Sbjct: 363 VTVASVKNFQLIAATQPAAGAPTPSQPVPPPPPEHDKVILQFGKVAKDMFTMDYHYPLSAFQAFAISLSSFDTKLACE 440
BLAST of CX300616 vs. ExPASy Swiss-Prot
Match: TLP11_ORYSJ (Tubby-like F-box protein 11 OS=Oryza sativa subsp. japonica GN=TULP11 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.380e-20 Identity = 50/78 (64.10%), Postives = 55/78 (70.51%), Query Frame = 1 Query: 13 VTVASVKNFHLIXXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 246 VTVASVKNF L+ +HD +ILQFGKVGKDMFTMDYRYP+SAFQAFAICLSSFDTK+ACE Sbjct: 340 VTVASVKNFQLVASDESNPTNQ-----------EHDDVILQFGKVGKDMFTMDYRYPISAFQAFAICLSSFDTKIACE 406
BLAST of CX300616 vs. ExPASy Swiss-Prot
Match: TLP10_ARATH (Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.380e-20 Identity = 52/80 (65.00%), Postives = 55/80 (68.75%), Query Frame = 1 Query: 13 VTVASVKNFHLIXXXXXXXXXXXXXXXXXXXXX--DHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 246 VTVASVKNF L+ + DK+ILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE Sbjct: 366 VTVASVKNFQLVAARQPQPQGTGAAAAPTSAPAHPEQDKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
BLAST of CX300616 vs. ExPASy Swiss-Prot
Match: TLP8_ORYSJ (Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.199e-19 Identity = 52/78 (66.67%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 13 VTVASVKNFHLIXXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 246 VT+ASVKNF LI + DKIILQFGKV KDMFTMDYRYPLSAFQAFAICLSSFDTKLACE Sbjct: 370 VTIASVKNFQLIAAPAQPPAGAPTPSQPAPP--EQDKIILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
BLAST of CX300616 vs. ExPASy Swiss-Prot
Match: TLP12_ORYSJ (Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica GN=TULP12 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.199e-19 Identity = 53/86 (61.63%), Postives = 55/86 (63.95%), Query Frame = 1 Query: 13 VTVASVKNFHLIXXXXXXXXXXXXXXXXXXXXX--------DHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 246 VTVASVKNF LI DH K+ILQFGKVGKDMFTMDYRYPLSAFQAFAICL+SFDTKLACE Sbjct: 366 VTVASVKNFQLIAAASSESSQLEQQQQQQQQNHASSSSSASDHGKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 451
BLAST of CX300616 vs. ExPASy Swiss-Prot
Match: TLP6_ORYSJ (Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica GN=TULP6 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.948e-19 Identity = 47/78 (60.26%), Postives = 55/78 (70.51%), Query Frame = 1 Query: 13 VTVASVKNFHLIXXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 246 VTVASVKNF L+ + DK+ILQFGK+GKD+FTMDYRYP+SAFQ+FAICLSSFDTK+ACE Sbjct: 337 VTVASVKNFQLVASDENGPTNQ-----------EQDKVILQFGKIGKDLFTMDYRYPISAFQSFAICLSSFDTKIACE 403
BLAST of CX300616 vs. ExPASy Swiss-Prot
Match: TLP3_ORYSJ (Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.769e-19 Identity = 49/78 (62.82%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 13 VTVASVKNFHLIXXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 246 VT+ASVKNF L+ D +K+ILQFGKV +DMFTMDYRYPLSAFQAFAICLSSFDTKLACE Sbjct: 373 VTIASVKNFQLVAAPSPPPAGAPTPSQPGPA--DPEKVILQFGKVARDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 448
BLAST of CX300616 vs. ExPASy Swiss-Prot
Match: TLP2_ARATH (Tubby-like F-box protein 2 OS=Arabidopsis thaliana GN=TULP2 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.015e-18 Identity = 47/78 (60.26%), Postives = 55/78 (70.51%), Query Frame = 1 Query: 13 VTVASVKNFHLIXXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 246 VTVASVKNF L+ +H+++ILQFGK+GKD+FTMDYRYPLSAFQAFAIC+SSFDTK ACE Sbjct: 325 VTVASVKNFQLVAEIDASLDAPPE---------EHERVILQFGKIGKDIFTMDYRYPLSAFQAFAICISSFDTKPACE 393
BLAST of CX300616 vs. ExPASy Swiss-Prot
Match: TLP1_ARATH (Tubby-like F-box protein 1 OS=Arabidopsis thaliana GN=TULP1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.015e-18 Identity = 53/85 (62.35%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 13 VTVASVKNFHLIXXXXXXXXXXXXXXXXXXXXXDH-------DKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 246 VTVASVKNF LI DKIILQFGKVGKDMFTMD+RYPLSAFQAFAICLSSFDTKLACE Sbjct: 371 VTVASVKNFQLIAANQPQPQPQPQPQPQPLTQPQPSGQTDGPDKIILQFGKVGKDMFTMDFRYPLSAFQAFAICLSSFDTKLACE 455 The following BLAST results are available for this feature:
BLAST of CX300616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300616 ID=CX300616; Name=CX300616; organism=Citrus clementina; type=EST; length=586bpback to top |