CX300625

Overview
NameCX300625
Unique NameCX300625
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1774 contig Ccv1_Contig1774:226..911. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: AVP2_ARATH (Pyrophosphate-energized membrane proton pump 2 OS=Arabidopsis thaliana GN=AVPL1 PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 1.103e-89
Identity = 84/103 (81.55%), Postives = 88/103 (85.44%), Query Frame = 1
Query:  343 FRILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 651
            FRILGYYTG             MFATV GILMALFLNTAGGAWDNAKK+IETGALGGKGS+ HKAAVTGDTVGDPFKDTAGPS+HVLIKMLATITLVMAP+FL
Sbjct:  700 FRILGYYTGQPLLGAKVVASMLMFATVCGILMALFLNTAGGAWDNAKKYIETGALGGKGSEAHKAAVTGDTVGDPFKDTAGPSIHVLIKMLATITLVMAPVFL 802          

HSP 2 Score: 122.479 bits (306), Expect = 1.103e-89
Identity = 59/67 (88.06%), Postives = 65/67 (97.01%), Query Frame = 2
Query:  143 CSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLSF 343
            C+AVG+TAQEVVNEVRRQFIERPGIMEYKEKPDY+RCVAIVASA+LREMIKPGALAI SP+V+GL F
Sbjct:  634 CAAVGRTAQEVVNEVRRQFIERPGIMEYKEKPDYSRCVAIVASAALREMIKPGALAIASPIVVGLVF 700          

HSP 3 Score: 78.9518 bits (193), Expect = 1.103e-89
Identity = 38/47 (80.85%), Postives = 41/47 (87.23%), Query Frame = 1
Query:    1 FLLFSAYMDEVATFAQEPFKQVDIAIPEVFVGGLLGSMLIFLLSGWA 141
            FLLFSAYMDEV+ FA   FK+VDIAIPEVFVGGLLG+MLIFL S WA
Sbjct:  587 FLLFSAYMDEVSAFANVSFKEVDIAIPEVFVGGLLGAMLIFLFSAWA 633          
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: AVPX_ARATH (Pyrophosphate-energized membrane proton pump 3 OS=Arabidopsis thaliana GN=AVPL2 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.403e-55
Identity = 134/233 (57.51%), Postives = 148/233 (63.52%), Query Frame = 1
Query:    1 FLLFSAYMDEVATFAQEPFKQVDIAIPEVFVGGLLGSMLIFLLSGWALLCSWQNCSGGC**G*KTVH*EAWYHGVQGEARLCSLCR----------NCGICIFAGDDKAWC----PRYHITISDWS--FFFRILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 651
            FLLFSAYMDEV+ FA   FK+VDIAIPEVF+GGLLG+MLIF      L  +W   + G     +T         V  E R   + R          + G C+      A      P     IS  +  F FRILGYYTG             MFATV GILMALFLNTAGGAWDNAKK+IETGALGGKGSD+HKAAVTGDTVGDPFKDTAGPS+HVLIKMLATITLVMAPIFL
Sbjct:  587 FLLFSAYMDEVSAFANVSFKEVDIAIPEVFIGGLLGAMLIF------LFSAWACAAVG-----RTAQ------EVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASSALREMIKPGALAIISPIAVGFVFRILGYYTGQPLLGAKVVAAMLMFATVCGILMALFLNTAGGAWDNAKKYIETGALGGKGSDSHKAAVTGDTVGDPFKDTAGPSIHVLIKMLATITLVMAPIFL 802          
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: HPPA_THETN (Pyrophosphate-energized proton pump OS=Thermoanaerobacter tengcongensis GN=hppA PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.379e-54
Identity = 58/80 (72.50%), Postives = 68/80 (85.00%), Query Frame = 1
Query:  409 MFATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIF 648
            M  T+SG+++AL+LN  GGAWDNAKKFIE G  GGKGSD HKA+V GDTVGDPFKDTAGPSLHVLIK+++TITLV   +F
Sbjct:  631 MIGTISGVILALYLNNGGGAWDNAKKFIELGNYGGKGSDAHKASVVGDTVGDPFKDTAGPSLHVLIKLISTITLVFVALF 710          

HSP 2 Score: 75.0998 bits (183), Expect = 2.379e-54
Identity = 35/63 (55.56%), Postives = 47/63 (74.60%), Query Frame = 2
Query:  149 AVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGL 337
            AVGK AQ V+ EVRRQF E PGIME   KPDYAR V IV   +L+EM+ PG + +++P+++G+
Sbjct:  557 AVGKAAQYVILEVRRQFREIPGIMEGTAKPDYARAVDIVTKGALKEMVIPGLIVVVTPILVGV 619          

HSP 3 Score: 49.2914 bits (116), Expect = 2.379e-54
Identity = 24/51 (47.06%), Postives = 33/51 (64.71%), Query Frame = 1
Query:    1 FLLFSAYMDEVATFAQEPFKQ---VDIAIPEVFVGGLLGSMLIFLLSGWAL 144
            FLLFSAY+DEV     +P      VDI  PEVF+G  +G+M+++L S  A+
Sbjct:  505 FLLFSAYLDEVKKILGKPIDSWFPVDIGKPEVFIGAFIGAMIVYLFSSTAI 555          
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: HPPA_FUSNN (Pyrophosphate-energized proton pump OS=Fusobacterium nucleatum subsp. nucleatum GN=hppA PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 3.517e-44
Identity = 50/80 (62.50%), Postives = 65/80 (81.25%), Query Frame = 1
Query:  415 ATVSGILMALFLNTAGGAWDNAKKFIETGALGGK-GSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 651
            A V+G+LMA+ +  AGGAWDN KK IE G  G K GSD HKAAV GDTVGDPFKDT+GPSL++LIK+++ ++LV+ P+F+
Sbjct:  589 ALVTGVLMAIMMANAGGAWDNGKKQIEGGYKGDKKGSDRHKAAVVGDTVGDPFKDTSGPSLNILIKLMSIVSLVLVPLFV 668          

HSP 2 Score: 80.8777 bits (198), Expect = 3.517e-44
Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = 2
Query:  116 LFSYLVDGLCSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGL 337
            LFS L     +AVGK A E+V EVRRQF E PGIM+  +KPDY RCV I   +SL++MI PG LAII P++IGL
Sbjct:  506 LFSALT---MTAVGKAAIEMVEEVRRQFREFPGIMDRTQKPDYKRCVEISTHSSLKQMILPGVLAIIVPVIIGL 576          

HSP 3 Score: 31.5722 bits (70), Expect = 3.517e-44
Identity = 17/42 (40.48%), Postives = 22/42 (52.38%), Query Frame = 1
Query:    7 LFSAYMDEVATFAQEPFKQVDIAIPEVFVGGLLGSMLIFLLS 132
            LF+AY + V     E    +D+  PEV  G  +G ML FL S
Sbjct:  468 LFAAYKEAVDKLTSEALV-IDVTDPEVIAGLFIGGMLTFLFS 508          
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: HPPA1_METMA (Pyrophosphate-energized proton pump 1 OS=Methanosarcina mazei GN=hppA1 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.681e-42
Identity = 50/79 (63.29%), Postives = 67/79 (84.81%), Query Frame = 1
Query:  415 ATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 651
            + VSG ++A+ ++ AGG+WDNAKKFIE G  GGKGSD HKA VTGDTVGDPFKDTAGP++++LIK+++ + LV AP+F+
Sbjct:  598 SVVSGFMLAITMSNAGGSWDNAKKFIELGNFGGKGSDAHKAGVTGDTVGDPFKDTAGPAINILIKLMSIVALVFAPLFI 676          

HSP 2 Score: 74.7146 bits (182), Expect = 2.681e-42
Identity = 39/76 (51.32%), Postives = 52/76 (68.42%), Query Frame = 2
Query:  110 PCLFSYLVDGLCSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGL 337
            P LFS +      AVG  A EVV EVRRQF E  G+ME K  PDY++C+ I   ++L+EMI PG LA+I+P+++GL
Sbjct:  512 PFLFSSMT---ILAVGNAAGEVVVEVRRQFKEIKGLMEGKADPDYSKCITISTHSALKEMIPPGILAVIAPILVGL 584          
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: HPPA_CLOTE (Pyrophosphate-energized proton pump OS=Clostridium tetani GN=hppA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.681e-42
Identity = 51/79 (64.56%), Postives = 67/79 (84.81%), Query Frame = 1
Query:  415 ATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 651
            A VSG+L+ + ++ AGGAWDNAKK+IE GA GGKGS+ HKAAV GDTVGDPFKDT+GPS+++LIK++  ++LV AP+ L
Sbjct:  584 ALVSGVLVGILMSNAGGAWDNAKKYIEGGAHGGKGSEAHKAAVVGDTVGDPFKDTSGPSMNILIKLMTIVSLVFAPVVL 662          

HSP 2 Score: 75.8702 bits (185), Expect = 2.681e-42
Identity = 40/76 (52.63%), Postives = 50/76 (65.79%), Query Frame = 2
Query:  110 PCLFSYLVDGLCSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGL 337
            P LF  L      +VGK A E++ EVRRQF   PGIME K  PDY +CV I  +A++REMI PG LAI+ P+ +GL
Sbjct:  498 PFLFGALT---MESVGKAANEMIEEVRRQFKTIPGIMEGKATPDYKKCVDISTAAAIREMILPGVLAIVVPVAMGL 570          
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: HPPA1_METAC (Pyrophosphate-energized proton pump 1 OS=Methanosarcina acetivorans GN=hppA1 PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 5.932e-42
Identity = 48/79 (60.76%), Postives = 66/79 (83.54%), Query Frame = 1
Query:  415 ATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 651
            +  SG ++A+ ++ AGGAWDNAKK+IE G  GGKGSD HKA VTGDTVGDPFKDTAGP++++LIK+++ + +V AP+F+
Sbjct:  598 SVASGFMIAITMSNAGGAWDNAKKYIELGNFGGKGSDAHKAGVTGDTVGDPFKDTAGPAINILIKLMSIVAVVFAPLFM 676          

HSP 2 Score: 76.6406 bits (187), Expect = 5.932e-42
Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 2
Query:  110 PCLFSYLVDGLCSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGL 337
            P LFS +      AVG  A EVV EVRRQF E  G+ME K  PDY +C+AI   ++L+EMI PG LA+I+PL++GL
Sbjct:  512 PYLFSSMT---ILAVGNAAGEVVVEVRRQFREIAGLMEGKADPDYGKCIAISTHSALKEMIPPGLLAVIAPLLVGL 584          
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: AVP_HORVU (Pyrophosphate-energized vacuolar membrane proton pump OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 5.811e-40
Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = 1
Query:  415 ATVSGILMALFLNTAGGAWDNAKKFIETG------ALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIF 648
            A VSG+ +A+  +  GGAWDNAKK+IE G      +LG KGSD HKAAV GDT+GDP KDT+GPSL++LIK++A  +LV AP F
Sbjct:  668 ALVSGVQIAISASNTGGAWDNAKKYIEAGNSEHARSLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFF 751          

HSP 2 Score: 73.9442 bits (180), Expect = 5.811e-40
Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 2
Query:  149 AVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLSF 343
            +VG  A ++V EVRRQF   PG+ME   KPDYA CV I   AS++EMI PGAL +++PL++G  F
Sbjct:  592 SVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTLF 656          

HSP 3 Score: 27.7202 bits (60), Expect = 5.811e-40
Identity = 16/52 (30.77%), Postives = 29/52 (55.77%), Query Frame = 1
Query:    1 FLLFSAYMDEVATF----AQEPFKQVDIAIPEVFVGGLLGSMLIFLLSGWAL 144
            F + SA +  +A F    ++   K VD+  P+VF+G ++G+ML +  S   +
Sbjct:  539 FAIGSAALVSLALFGAFVSRAGVKVVDVLSPKVFIGLIVGAMLPYWFSAMTM 590          
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: HPPA2_METMA (Pyrophosphate-energized proton pump 2 OS=Methanosarcina mazei GN=hppA2 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.537e-39
Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = 1
Query:  421 VSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 651
            V G ++AL ++  GGAWDNAKK IE G  GGKGS+ H+AAV GDTVGDPFKDTAGP+L+ LIK++  + ++ +P+ +
Sbjct:  590 VVGFMLALMMDNGGGAWDNAKKLIEDGYYGGKGSEAHRAAVVGDTVGDPFKDTAGPALNSLIKVVNMVAILFSPLII 666          

HSP 2 Score: 81.2629 bits (199), Expect = 1.537e-39
Identity = 45/75 (60.00%), Postives = 52/75 (69.33%), Query Frame = 2
Query:  110 PCLFSYLVDGLCSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIG 334
            P LFS +   + SAVGK A EVVNEVRRQF E PGIME   KP+Y RCV IV  A+L +M  PG LA+I PL+ G
Sbjct:  502 PFLFSAV---MMSAVGKAAFEVVNEVRRQFREIPGIMEGTAKPEYGRCVDIVTKAALHDMAMPGFLAVIIPLLTG 573          
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: HPPA_LEPIN (Pyrophosphate-energized proton pump OS=Leptospira interrogans GN=hppA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.001e-39
Identity = 48/79 (60.76%), Postives = 63/79 (79.75%), Query Frame = 1
Query:  415 ATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 651
            A V+G+++A+    +GG WDNAKK+IE  A GGKGSD HKAAV GDTVGDPFKDT+GPS+++LIK++A  +LV A  F+
Sbjct:  616 ALVAGVVLAISAANSGGGWDNAKKYIEKKA-GGKGSDQHKAAVVGDTVGDPFKDTSGPSINILIKLMAITSLVFAEFFV 693          

HSP 2 Score: 80.1073 bits (196), Expect = 2.001e-39
Identity = 41/78 (52.56%), Postives = 54/78 (69.23%), Query Frame = 2
Query:  110 PCLFSYLVDGLCSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLSF 343
            P LF+ +      +VGK A ++V EVR+QF E PGIME K KPDY RCV I  SA+LREMI PG L +++P+++G  F
Sbjct:  530 PFLFTAMT---MKSVGKAAVDMVEEVRKQFKEIPGIMEGKNKPDYKRCVDISTSAALREMILPGLLVLLTPILVGYLF 604          
The following BLAST results are available for this feature:
BLAST of CX300625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
AVP2_ARATH1.103e-8981.55Pyrophosphate-energized membrane proton pump 2 OS=... [more]
AVPX_ARATH2.403e-5557.51Pyrophosphate-energized membrane proton pump 3 OS=... [more]
HPPA_THETN2.379e-5472.50Pyrophosphate-energized proton pump OS=Thermoanaer... [more]
HPPA_FUSNN3.517e-4462.50Pyrophosphate-energized proton pump OS=Fusobacteri... [more]
HPPA1_METMA2.681e-4263.29Pyrophosphate-energized proton pump 1 OS=Methanosa... [more]
HPPA_CLOTE2.681e-4264.56Pyrophosphate-energized proton pump OS=Clostridium... [more]
HPPA1_METAC5.932e-4260.76Pyrophosphate-energized proton pump 1 OS=Methanosa... [more]
AVP_HORVU5.811e-4059.52Pyrophosphate-energized vacuolar membrane proton p... [more]
HPPA2_METMA1.537e-3957.14Pyrophosphate-energized proton pump 2 OS=Methanosa... [more]
HPPA_LEPIN2.001e-3960.76Pyrophosphate-energized proton pump OS=Leptospira ... [more]

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Properties
Property NameValue
Genbank descriptionC07012D06SK SaltLeaf1 Citrus clementina cDNA clone C07012D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300625 ID=CX300625; Name=CX300625; organism=Citrus clementina; type=EST; length=686bp
TTTCTTCTGTTCAGTGCTTATATGGATGAAGTTGCTACATTTGCACAGGA
ACCTTTTAAACAGGTGGATATTGCCATTCCGGAAGTTTTCGTTGGAGGAC
TGTTGGGATCCATGCTTATTTTCTTACTTAGTGGATGGGCTTTGCTCTGC
AGTTGGCAAAACTGCTCAGGAGGTTGTTAATGAGGTTAGAAGACAGTTCA
TTGAGAGGCCTGGTATCATGGAGTACAAGGAGAAGCCAGACTATGCTCGC
TGTGTCGCAATTGTGGCATCTGCATCTTTGCGGGAGATGATAAAGCCTGG
TGCCCTCGCTATCATATCACCATTAGTGATTGGTCTTTCTTTTTTCGGAT
TTTGGGATACTATACAGGACATGCGCTACTAGGGGCCAAAGTGGTGGCTG
CTTTACTGATGTTTGCAACTGTCTCTGGTATTCTTATGGCTCTTTTCCTG
AACACAGCCGGAGGAGCATGGGATAATGCAAAGAAGTTCATAGAGACTGG
GGCTCTTGGAGGCAAAGGTAGTGATACTCATAAAGCAGCGGTCACAGGAG
ATACTGTGGGCGATCCATTCAAAGACACAGCCGGACCTTCACTTCATGTT
CTCATTAAAATGCTTGCGACCATTACGCTTGTCATGGCTCCCATCTTCCT
GTGAGAGAGTTGTTAATATCTATCGCAGTTTTTCCC
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