CX300632

Overview
NameCX300632
Unique NameCX300632
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length593
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: AVP2_ARATH (Pyrophosphate-energized membrane proton pump 2 OS=Arabidopsis thaliana GN=AVPL1 PE=1 SV=2)

HSP 1 Score: 300.442 bits (768), Expect = 4.284e-81
Identity = 148/176 (84.09%), Postives = 159/176 (90.34%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLFRILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 530
            FLFS WAC+AVG+TAQEVVNEVRRQFIERPGIMEYKEKPDY+RCVAIVASA+LREMIKPGALAI SP+V+GL+FRILGYYTG             MFATV GILMALFLNTAGGAWDNAKK+IETGALGGKGS+ HKAAVTGDTVGDPFKDTAGPS+HVLIKMLATITLVMAP+FL
Sbjct:  627 FLFSAWACAAVGRTAQEVVNEVRRQFIERPGIMEYKEKPDYSRCVAIVASAALREMIKPGALAIASPIVVGLVFRILGYYTGQPLLGAKVVASMLMFATVCGILMALFLNTAGGAWDNAKKYIETGALGGKGSEAHKAAVTGDTVGDPFKDTAGPSIHVLIKMLATITLVMAPVFL 802          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: AVPX_ARATH (Pyrophosphate-energized membrane proton pump 3 OS=Arabidopsis thaliana GN=AVPL2 PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.246e-80
Identity = 147/176 (83.52%), Postives = 158/176 (89.77%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLFRILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 530
            FLFS WAC+AVG+TAQEVVNEVRRQFIERPGIM+YKEKPDY RCVAIVAS++LREMIKPGALAIISP+ +G +FRILGYYTG             MFATV GILMALFLNTAGGAWDNAKK+IETGALGGKGSD+HKAAVTGDTVGDPFKDTAGPS+HVLIKMLATITLVMAPIFL
Sbjct:  627 FLFSAWACAAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASSALREMIKPGALAIISPIAVGFVFRILGYYTGQPLLGAKVVAAMLMFATVCGILMALFLNTAGGAWDNAKKYIETGALGGKGSDSHKAAVTGDTVGDPFKDTAGPSIHVLIKMLATITLVMAPIFL 802          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_THETN (Pyrophosphate-energized proton pump OS=Thermoanaerobacter tengcongensis GN=hppA PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.535e-49
Identity = 100/175 (57.14%), Postives = 123/175 (70.29%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLFRILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIF 527
            +LFS  A  AVGK AQ V+ EVRRQF E PGIME   KPDYAR V IV   +L+EM+ PG + +++P+++G+   ILG                 M  T+SG+++AL+LN  GGAWDNAKKFIE G  GGKGSD HKA+V GDTVGDPFKDTAGPSLHVLIK+++TITLV   +F
Sbjct:  548 YLFSSTAIRAVGKAAQYVILEVRRQFREIPGIMEGTAKPDYARAVDIVTKGALKEMVIPGLIVVVTPILVGV---ILGKEAA---------AAFLMIGTISGVILALYLNNGGGAWDNAKKFIELGNYGGKGSDAHKASVVGDTVGDPFKDTAGPSLHVLIKLISTITLVFVALF 710          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_CLOTE (Pyrophosphate-energized proton pump OS=Clostridium tetani GN=hppA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.461e-45
Identity = 93/179 (51.96%), Postives = 120/179 (67.04%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLF---RILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 530
            FLF      +VGK A E++ EVRRQF   PGIME K  PDY +CV I  +A++REMI PG LAI+ P+ +GLL     + G   G               A VSG+L+ + ++ AGGAWDNAKK+IE GA GGKGS+ HKAAV GDTVGDPFKDT+GPS+++LIK++  ++LV AP+ L
Sbjct:  499 FLFGALTMESVGKAANEMIEEVRRQFKTIPGIMEGKATPDYKKCVDISTAAAIREMILPGVLAIVVPVAMGLLLGKEALGGLLAG---------------ALVSGVLVGILMSNAGGAWDNAKKYIEGGAHGGKGSEAHKAAVVGDTVGDPFKDTSGPSMNILIKLMTIVSLVFAPVVL 662          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA1_METMA (Pyrophosphate-energized proton pump 1 OS=Methanosarcina mazei GN=hppA1 PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.461e-45
Identity = 91/179 (50.84%), Postives = 122/179 (68.16%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLF---RILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 530
            FLFS     AVG  A EVV EVRRQF E  G+ME K  PDY++C+ I   ++L+EMI PG LA+I+P+++GL+     + G   G               + VSG ++A+ ++ AGG+WDNAKKFIE G  GGKGSD HKA VTGDTVGDPFKDTAGP++++LIK+++ + LV AP+F+
Sbjct:  513 FLFSSMTILAVGNAAGEVVVEVRRQFKEIKGLMEGKADPDYSKCITISTHSALKEMIPPGILAVIAPILVGLVLGAGALGGLLAG---------------SVVSGFMLAITMSNAGGSWDNAKKFIELGNFGGKGSDAHKAGVTGDTVGDPFKDTAGPAINILIKLMSIVALVFAPLFI 676          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA1_METAC (Pyrophosphate-energized proton pump 1 OS=Methanosarcina acetivorans GN=hppA1 PE=3 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 3.207e-44
Identity = 90/179 (50.28%), Postives = 121/179 (67.60%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLF---RILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 530
            +LFS     AVG  A EVV EVRRQF E  G+ME K  PDY +C+AI   ++L+EMI PG LA+I+PL++GL+     + G   G               +  SG ++A+ ++ AGGAWDNAKK+IE G  GGKGSD HKA VTGDTVGDPFKDTAGP++++LIK+++ + +V AP+F+
Sbjct:  513 YLFSSMTILAVGNAAGEVVVEVRRQFREIAGLMEGKADPDYGKCIAISTHSALKEMIPPGLLAVIAPLLVGLVLGPGALGGLLAG---------------SVASGFMIAITMSNAGGAWDNAKKYIELGNFGGKGSDAHKAGVTGDTVGDPFKDTAGPAINILIKLMSIVAVVFAPLFM 676          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_FUSNN (Pyrophosphate-energized proton pump OS=Fusobacterium nucleatum subsp. nucleatum GN=hppA PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.591e-43
Identity = 96/179 (53.63%), Postives = 122/179 (68.16%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGL--LFRILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGG-KGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 530
            FLFS    +AVGK A E+V EVRRQF E PGIM+  +KPDY RCV I   +SL++MI PG LAII P++IGL  +  + G   G               A V+G+LMA+ +  AGGAWDN KK IE G  G  KGSD HKAAV GDTVGDPFKDT+GPSL++LIK+++ ++LV+ P+F+
Sbjct:  505 FLFSALTMTAVGKAAIEMVEEVRRQFREFPGIMDRTQKPDYKRCVEISTHSSLKQMILPGVLAIIVPVIIGLWSVKALGGLLAG---------------ALVTGVLMAIMMANAGGAWDNGKKQIEGGYKGDKKGSDRHKAAVVGDTVGDPFKDTSGPSLNILIKLMSIVSLVLVPLFV 668          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_LEPIN (Pyrophosphate-energized proton pump OS=Leptospira interrogans GN=hppA PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 6.048e-43
Identity = 92/179 (51.40%), Postives = 120/179 (67.04%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLF---RILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 530
            FLF+     +VGK A ++V EVR+QF E PGIME K KPDY RCV I  SA+LREMI PG L +++P+++G LF    + G   G               A V+G+++A+    +GG WDNAKK+IE  A GGKGSD HKAAV GDTVGDPFKDT+GPS+++LIK++A  +LV A  F+
Sbjct:  531 FLFTAMTMKSVGKAAVDMVEEVRKQFKEIPGIMEGKNKPDYKRCVDISTSAALREMILPGLLVLLTPILVGYLFGVKTLAGVLAG---------------ALVAGVVLAISAANSGGGWDNAKKYIEKKA-GGKGSDQHKAAVVGDTVGDPFKDTSGPSINILIKLMAITSLVFAEFFV 693          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_LEPIC (Pyrophosphate-energized proton pump OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=hppA PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 6.048e-43
Identity = 92/179 (51.40%), Postives = 120/179 (67.04%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLF---RILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 530
            FLF+     +VGK A ++V EVR+QF E PGIME K KPDY RCV I  SA+LREMI PG L +++P+++G LF    + G   G               A V+G+++A+    +GG WDNAKK+IE  A GGKGSD HKAAV GDTVGDPFKDT+GPS+++LIK++A  +LV A  F+
Sbjct:  531 FLFTAMTMKSVGKAAVDMVEEVRKQFKEIPGIMEGKNKPDYKRCVDISTSAALREMILPGLLVLLTPILVGYLFGVKTLAGVLAG---------------ALVAGVVLAISAANSGGGWDNAKKYIEKKA-GGKGSDQHKAAVVGDTVGDPFKDTSGPSINILIKLMAITSLVFAEFFV 693          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA2_METMA (Pyrophosphate-energized proton pump 2 OS=Methanosarcina mazei GN=hppA2 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.001e-42
Identity = 92/179 (51.40%), Postives = 114/179 (63.69%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLF---RILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 530
            FLFS    SAVGK A EVVNEVRRQF E PGIME   KP+Y RCV IV  A+L +M  PG LA+I PL+ G       + G  TG                 V G ++AL ++  GGAWDNAKK IE G  GGKGS+ H+AAV GDTVGDPFKDTAGP+L+ LIK++  + ++ +P+ +
Sbjct:  503 FLFSAVMMSAVGKAAFEVVNEVRRQFREIPGIMEGTAKPEYGRCVDIVTKAALHDMAMPGFLAVIIPLLTGFFLGPEALAGLLTG---------------LIVVGFMLALMMDNGGGAWDNAKKLIEDGYYGGKGSEAHRAAVVGDTVGDPFKDTAGPALNSLIKVVNMVAILFSPLII 666          
The following BLAST results are available for this feature:
BLAST of CX300632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
AVP2_ARATH4.284e-8184.09Pyrophosphate-energized membrane proton pump 2 OS=... [more]
AVPX_ARATH1.246e-8083.52Pyrophosphate-energized membrane proton pump 3 OS=... [more]
HPPA_THETN2.535e-4957.14Pyrophosphate-energized proton pump OS=Thermoanaer... [more]
HPPA_CLOTE6.461e-4551.96Pyrophosphate-energized proton pump OS=Clostridium... [more]
HPPA1_METMA6.461e-4550.84Pyrophosphate-energized proton pump 1 OS=Methanosa... [more]
HPPA1_METAC3.207e-4450.28Pyrophosphate-energized proton pump 1 OS=Methanosa... [more]
HPPA_FUSNN1.591e-4353.63Pyrophosphate-energized proton pump OS=Fusobacteri... [more]
HPPA_LEPIN6.048e-4351.40Pyrophosphate-energized proton pump OS=Leptospira ... [more]
HPPA_LEPIC6.048e-4351.40Pyrophosphate-energized proton pump OS=Leptospira ... [more]
HPPA2_METMA3.001e-4251.40Pyrophosphate-energized proton pump 2 OS=Methanosa... [more]

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Properties
Property NameValue
Genbank descriptionC07012E02SK SaltLeaf1 Citrus clementina cDNA clone C07012E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300632 ID=CX300632; Name=CX300632; organism=Citrus clementina; type=EST; length=593bp
TTTTCTTATTTAGTGGATGGGCTTGCTCTGCAGTTGGCAAAACTGCTCAG
GAGGTTGTTAATGAGGTTAGAAGACAGTTCATTGAGAGGCCTGGTATCAT
GGAGTACAAGGAGAAGCCAGACTATGCTCGCTGTGTCGCAATTGTGGCAT
CTGCATCTTTGCGGGAGATGATAAAGCCTGGTGCCCTCGCTATCATATCA
CCATTAGTGATTGGTCTTCTTTTTCGGATTTTGGGATACTATACAGGACA
TGCGCTACTAGGGGCCAAAGTGGTGGCTGCTTTACTGATGTTTGCAACTG
TCTCTGGTATTCTTATGGCTCTTTTCCTGAACACAGCCGGAGGAGCATGG
GATAATGCAAAGAAGTTCATAGAGACTGGGGCTCTTGGAGGCAAAGGTAG
TGATACTCATAAAGCAGCGGTCACAGGAGATACTGTGGGCGATCCATTCA
AAGACACAGCCGGACCTTCACTTCATGTTCTCATTAAAATGCTTGCGACC
ATAACGCTTGTCATGGCTCCCATCTTCCTGTGAGAGAGTTGTTAATATCT
ATCGCAGTTTTCCCAGAACATACAAGCACCCATTACCGTTGAA
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