CX300659
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B_GOSHI (Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 5.611e-22 Identity = 58/91 (63.74%), Postives = 64/91 (70.33%), Query Frame = 2 Query: 173 SGDXXXXXXXXSIETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 +GD S+ETYK YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRL + + + + L PGELAKHAV Sbjct: 45 AGDKKKKRVKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYN-KKPTITSREIQTAVRLVLPGELAKHAV 134
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B3_SOLLC (Histone H2B.3 (Fragment) OS=Solanum lycopersicum GN=H2B-3 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.250e-21 Identity = 57/91 (62.64%), Postives = 64/91 (70.33%), Query Frame = 2 Query: 173 SGDXXXXXXXXSIETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 +GD ++ETYK YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRL + + + + L PGELAKHAV Sbjct: 35 AGDKKKKRSKKAVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYN-KKPTITSREIQTAVRLVLPGELAKHAV 124
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5) HSP 1 Score: 102.834 bits (255), Expect = 1.633e-21 Identity = 57/90 (63.33%), Postives = 63/90 (70.00%), Query Frame = 2 Query: 176 GDXXXXXXXXSIETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 GD S+ETYK YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEAS+L + + + + L PGELAKHAV Sbjct: 49 GDKKKKMKKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYN-KKPTITSREIQTAVRLVLPGELAKHAV 137
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B2_SOLLC (Histone H2B.2 OS=Solanum lycopersicum GN=H2B-2 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.785e-21 Identity = 55/80 (68.75%), Postives = 62/80 (77.50%), Query Frame = 2 Query: 206 SIETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 SIETYK YIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQE+SRL ++ + + + L PGELAKHAV Sbjct: 49 SIETYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARIN-KKPTITSREIQTAVRLVLPGELAKHAV 127
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B3_MEDTR (Probable histone H2B.3 OS=Medicago truncatula PE=3 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 3.637e-21 Identity = 56/91 (61.54%), Postives = 63/91 (69.23%), Query Frame = 2 Query: 173 SGDXXXXXXXXSIETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 S D S+ETYK YIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQE+SRL + + + + L PGELAKHAV Sbjct: 36 SSDKKKKRTKKSVETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYN-KKPTITSREIQTAVRLVLPGELAKHAV 125
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B1_SOLLC (Histone H2B.1 OS=Solanum lycopersicum GN=H2B-1 PE=2 SV=4) HSP 1 Score: 101.679 bits (252), Expect = 3.637e-21 Identity = 54/80 (67.50%), Postives = 62/80 (77.50%), Query Frame = 2 Query: 206 SIETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 S+ETYK YIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQE+SRL ++ + + + L PGELAKHAV Sbjct: 51 SVETYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARIN-KKPTITSREIQTAVRLVLPGELAKHAV 129
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 3.637e-21 Identity = 56/91 (61.54%), Postives = 64/91 (70.33%), Query Frame = 2 Query: 173 SGDXXXXXXXXSIETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 +G+ S+ETYK YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRL + + + + L PGELAKHAV Sbjct: 46 AGEKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYN-KKPTITSREIQTAVRLVLPGELAKHAV 135
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B1_ARATH (Histone H2B.1 OS=Arabidopsis thaliana GN=At1g07790 PE=1 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 6.204e-21 Identity = 55/91 (60.44%), Postives = 64/91 (70.33%), Query Frame = 2 Query: 173 SGDXXXXXXXXSIETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 +GD ++ETYK YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+L + + + + L PGELAKHAV Sbjct: 46 AGDKKKKRSKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYN-KKPTITSREIQTAVRLVLPGELAKHAV 135
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B_CAPAN (Histone H2B OS=Capsicum annuum GN=HIS2B PE=2 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 8.103e-21 Identity = 55/80 (68.75%), Postives = 61/80 (76.25%), Query Frame = 2 Query: 206 SIETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 SIETYK YIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQE+SRL + + + + L PGELAKHAV Sbjct: 54 SIETYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARYN-KKPTITSREIQTAVRLVLPGELAKHAV 132
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B7_ARATH (Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030 PE=1 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 1.382e-20 Identity = 55/90 (61.11%), Postives = 62/90 (68.89%), Query Frame = 2 Query: 176 GDXXXXXXXXSIETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 GD S+ETYK YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA E+S+L + + + + L PGELAKHAV Sbjct: 44 GDKKKKMKKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYN-KKPTITSREIQTAVRLVLPGELAKHAV 132 The following BLAST results are available for this feature:
BLAST of CX300659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300659 ID=CX300659; Name=CX300659; organism=Citrus clementina; type=EST; length=665bpback to top |