CX300660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300660 vs. ExPASy Swiss-Prot
Match: NDK2_SPIOL (Nucleoside diphosphate kinase 2, chloroplastic OS=Spinacia oleracea GN=NDPK2 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.303e-19 Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 1 Query: 112 GSDSPENGKREKGLWFKEGELCQWTPAQAQWLRE 213 GSDSP+NGKRE GLWFKEGE+CQWTPAQA WLRE Sbjct: 200 GSDSPDNGKREIGLWFKEGEICQWTPAQAPWLRE 233 HSP 2 Score: 42.3578 bits (98), Expect = 3.303e-19 Identity = 19/24 (79.17%), Postives = 20/24 (83.33%), Query Frame = 2 Query: 29 GSNGPSSAEPGTIRGDLAVQTGRN 100 G+ P AEPGTIRGDLAVQTGRN Sbjct: 173 GATDPLQAEPGTIRGDLAVQTGRN 196
BLAST of CX300660 vs. ExPASy Swiss-Prot
Match: NDK2_PEA (Nucleoside diphosphate kinase 2, chloroplastic OS=Pisum sativum GN=NDPK2 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.202e-17 Identity = 27/34 (79.41%), Postives = 29/34 (85.29%), Query Frame = 1 Query: 112 GSDSPENGKREKGLWFKEGELCQWTPAQAQWLRE 213 GSDSPENG+RE LWFKEGELC+WTP Q WLRE Sbjct: 197 GSDSPENGEREIALWFKEGELCEWTPVQEPWLRE 230 HSP 2 Score: 40.817 bits (94), Expect = 8.202e-17 Identity = 18/24 (75.00%), Postives = 19/24 (79.17%), Query Frame = 2 Query: 29 GSNGPSSAEPGTIRGDLAVQTGRN 100 G+ P AEPGTIRGD AVQTGRN Sbjct: 170 GATDPLQAEPGTIRGDFAVQTGRN 193
BLAST of CX300660 vs. ExPASy Swiss-Prot
Match: NDK2_ARATH (Nucleoside diphosphate kinase II, chloroplastic OS=Arabidopsis thaliana GN=NDPK2 PE=1 SV=2) HSP 1 Score: 65.0846 bits (157), Expect = 8.202e-17 Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 1 Query: 112 GSDSPENGKREKGLWFKEGELCQWTPAQAQWLRE 213 GSDSPENGKRE GLWFKEGELC+W A A WLRE Sbjct: 198 GSDSPENGKREIGLWFKEGELCKWDSALATWLRE 231 HSP 2 Score: 41.9726 bits (97), Expect = 8.202e-17 Identity = 19/24 (79.17%), Postives = 19/24 (79.17%), Query Frame = 2 Query: 29 GSNGPSSAEPGTIRGDLAVQTGRN 100 G P AEPGTIRGDLAVQTGRN Sbjct: 171 GKTDPLQAEPGTIRGDLAVQTGRN 194
BLAST of CX300660 vs. ExPASy Swiss-Prot
Match: NDK2_TOBAC (Nucleoside diphosphate kinase 2, chloroplastic OS=Nicotiana tabacum GN=NDPK2 PE=1 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 1.129e-15 Identity = 25/34 (73.53%), Postives = 26/34 (76.47%), Query Frame = 1 Query: 112 GSDSPENGKREKGLWFKEGELCQWTPAQAQWLRE 213 GSDSP+NGKRE LWF EGELC WTP Q WL E Sbjct: 199 GSDSPDNGKREIALWFGEGELCSWTPVQEPWLIE 232 HSP 2 Score: 43.1282 bits (100), Expect = 1.129e-15 Identity = 19/24 (79.17%), Postives = 21/24 (87.50%), Query Frame = 2 Query: 29 GSNGPSSAEPGTIRGDLAVQTGRN 100 G+ P +AEPGTIRGDLAVQTGRN Sbjct: 172 GATNPLNAEPGTIRGDLAVQTGRN 195 The following BLAST results are available for this feature:
BLAST of CX300660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300660 ID=CX300660; Name=CX300660; organism=Citrus clementina; type=EST; length=494bpback to top |