CX302536

Overview
NameCX302536
Unique NameCX302536
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length561
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9488 contig Ccv1_Contig9488:344..904. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: AL2B4_ARATH (Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 6.928e-83
Identity = 138/177 (77.97%), Postives = 169/177 (95.48%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFD 560
            D+AVELAHFALF+NQGQCCCAGSRT+VHE+VYDEFVEK+KARA++R+VGDPF+ G+EQGP ID +QFEKV++YI+SGIESNATLECGGD++G++GYF+QPTVFS+VKDDMLIAQDEIFGPVQSILKF + D+VI+RAN+T++GLAAGVFTK+ DTAN + RAL+AGTVW+NC+DVFD
Sbjct:  321 DKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQIGDKGYFIQPTVFSNVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTKNLDTANRVSRALKAGTVWVNCFDVFD 497
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: AL2B7_ARATH (Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2)

HSP 1 Score: 296.59 bits (758), Expect = 5.489e-80
Identity = 136/177 (76.84%), Postives = 162/177 (91.53%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFD 560
            DQAVELAHFALF+NQGQCCCAGSRT+VHERVYDEFVEKAKARA++R VGDPFKSG+EQGP +D EQF K+L+YI+ G+E+ ATL+ GGDRLG++GY++QPTVFSDVKDDMLIA DEIFGPVQ+ILKFK+ D+VI RAN +R+GLAAGVFT++ DTA+ +MRALR GTVWINC+DV D
Sbjct:  317 DQAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILKYIKHGVEAGATLQAGGDRLGSKGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYGLAAGVFTQNLDTAHRLMRALRVGTVWINCFDVLD 493
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: ALDH2_MOUSE (Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 2.096e-63
Identity = 114/176 (64.77%), Postives = 138/176 (78.41%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVF 557
            D AVE AHFALF+NQGQCCCAGSRT+V E VYDEFVE++ ARA  R+VG+PF S  EQGP +D  QF+K+L YI+SG +  A L CGG    +RGYF+QPTVF DVKD M IA++EIFGPV  ILKFK  ++V+ RAN +++GLAA VFTK  D AN + +AL+AGTVWINCYDVF
Sbjct:  303 DWAVEQAHFALFFNQGQCCCAGSRTFVQENVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANDSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVF 478
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: ALDH2_RAT (Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 2.737e-63
Identity = 114/176 (64.77%), Postives = 138/176 (78.41%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVF 557
            D AVE AHFALF+NQGQCCCAGSRT+V E VYDEFVE++ ARA  R+VG+PF S  EQGP +D  QF+K+L YI+SG +  A L CGG    +RGYF+QPTVF DVKD M IA++EIFGPV  ILKFK  ++V+ RAN +++GLAA VFTK  D AN + +AL+AGTVWINCYDVF
Sbjct:  303 DWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVF 478
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: ALDH2_MESAU (Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 2.737e-63
Identity = 114/176 (64.77%), Postives = 138/176 (78.41%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVF 557
            D AVE AHFALF+NQGQCCCAGSRT+V E VYDEFVE++ ARA  R+VG+PF S  EQGP +D  QF+K+L YI+SG +  A L CGG    +RGYF+QPTVF DVKD M IA++EIFGPV  ILKFK  ++V+ RAN +++GLAA VFTK  D AN + +AL+AGTVWINCYDVF
Sbjct:  284 DWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVF 459
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: ALDH2_PIG (Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 3.026e-62
Identity = 113/176 (64.20%), Postives = 137/176 (77.84%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVF 557
            D AVE AHFALF+NQGQCCCAGSRT+V E +Y EFVE++ ARA  R+VG+PF S  EQGP ID  QF+K+L YI+SG E  A L CGG    +RGYF+QPTVF DV+D M IA++EIFGPV  ILKFK  ++VI RAN +++GLAA VFTK  D AN + +AL+AGTVW+NCYDVF
Sbjct:  305 DWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARARSRVVGNPFDSRTEQGPQIDETQFKKILGYIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVIGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVF 480
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: ALDH2_BOVIN (Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 3.026e-62
Identity = 112/176 (63.64%), Postives = 137/176 (77.84%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVF 557
            D AVE AHFALF+NQGQCCCAGSRT+V E +Y EFVE++ ARA  R+VG+PF S  EQGP +D  QF+KVL YI+SG E  A L CGG    +RGYF+QPTVF DV+D M IA++EIFGPV  ILKFK  ++V+ RAN +++GLAA VFTK  D AN + +AL+AGTVW+NCYDVF
Sbjct:  304 DWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVF 479
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: ALDH2_HUMAN (Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 1.962e-61
Identity = 110/176 (62.50%), Postives = 136/176 (77.27%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVF 557
            D AVE AHFALF+NQGQCCCAGSRT+V E +YDEFVE++ ARA  R+VG+PF S  EQGP +D  QF+K+L YI +G +  A L CGG    +RGYF+QPTVF DV+D M IA++EIFGPV  ILKFK  ++V+ RAN + +GLAA VFTK  D AN + +AL+AGTVW+NCYDVF
Sbjct:  301 DWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVF 476
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: ALDH2_PONAB (Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 7.454e-61
Identity = 109/176 (61.93%), Postives = 136/176 (77.27%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVF 557
            D AVE AHFALF+NQGQCCCAGSRT+V E +YDEFVE++ ARA  R+VG+PF S  EQGP +D  QF+K+L YI +G +  A L CGG    +RGYF+QPTVF DV+D M IA++EIFGPV  ILKFK  ++V+ RAN + +GLAA VFTK  D AN + +AL+AGTVW+NCY+VF
Sbjct:  301 DWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYNVF 476
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: ALDH2_HORSE (Aldehyde dehydrogenase, mitochondrial OS=Equus caballus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 7.454e-61
Identity = 113/176 (64.20%), Postives = 135/176 (76.70%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVF 557
            D AVE AHFALF+NQGQCC AGSRT+V E VY EFVE++ ARA  R+VG+PF S  EQGP +D  QF KVL YI+SG E  A L CGG    +RGYF+QPTVF DV+D M IA++EIFGPV  ILKFK  ++V+ RAN +++GLAA VFTK  D AN + +AL+AGTVWINCYDVF
Sbjct:  284 DWAVEQAHFALFFNQGQCCGAGSRTFVQEDVYAEFVERSVARAKSRVVGNPFDSQTEQGPQVDETQFNKVLGYIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVF 459
The following BLAST results are available for this feature:
BLAST of CX302536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 447
Match NameE-valueIdentityDescription
AL2B4_ARATH6.928e-8377.97Aldehyde dehydrogenase family 2 member B4, mitocho... [more]
AL2B7_ARATH5.489e-8076.84Aldehyde dehydrogenase family 2 member B7, mitocho... [more]
ALDH2_MOUSE2.096e-6364.77Aldehyde dehydrogenase, mitochondrial OS=Mus muscu... [more]
ALDH2_RAT2.737e-6364.77Aldehyde dehydrogenase, mitochondrial OS=Rattus no... [more]
ALDH2_MESAU2.737e-6364.77Aldehyde dehydrogenase, mitochondrial OS=Mesocrice... [more]
ALDH2_PIG3.026e-6264.20Aldehyde dehydrogenase, mitochondrial OS=Sus scrof... [more]
ALDH2_BOVIN3.026e-6263.64Aldehyde dehydrogenase, mitochondrial OS=Bos tauru... [more]
ALDH2_HUMAN1.962e-6162.50Aldehyde dehydrogenase, mitochondrial OS=Homo sapi... [more]
ALDH2_PONAB7.454e-6161.93Aldehyde dehydrogenase, mitochondrial OS=Pongo abe... [more]
ALDH2_HORSE7.454e-6164.20Aldehyde dehydrogenase, mitochondrial OS=Equus cab... [more]

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Properties
Property NameValue
Genbank descriptionC07003G06SK NTLeaf1 Citrus clementina cDNA clone C07003G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX302536 ID=CX302536; Name=CX302536; organism=Citrus clementina; type=EST; length=561bp
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNGACCAGGCTGTGGAACTTGCA
CACTTTGCTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCG
TACTTATGTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGG
CACGTGCAATGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAA
CAAGGTCCTTAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACAT
AAGGTCTGGAATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGAT
TGGGCAACAGAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAG
GATGACATGTTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCAT
CTTGAAGTTCAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACAC
GCTTTGGTCTAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAAC
ACCATGATGCGTGCACTGAGAGCTGGGACTGTATGGATTAACTGCTACGA
CGTGTTTGATG
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