CX302544

Overview
NameCX302544
Unique NameCX302544
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length579
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14114 contig Ccv1_Contig14114:798..1376. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX302544 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 4.993e-79
Identity = 142/157 (90.45%), Postives = 149/157 (94.90%), Query Frame = 1
Query:   31 VAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 501
            VA+KVWAEVFFYLA+NNVMFEGILLKPSMVTPGAE K++ATP+QVA YTLKLL  R+PPAVPGIMFLSGGQSEVEATLNLNAMNQ PNPWHVSFSYARALQNTCLKTWGGRPENV AAQ TLL RAKANSLAQLGKYTGEGESEEAK+GMFVKGYTY
Sbjct:  242 VAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAESKDRATPEQVAAYTLKLLRNRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 398          
BLAST of CX302544 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 291.197 bits (744), Expect = 2.478e-78
Identity = 138/157 (87.90%), Postives = 149/157 (94.90%), Query Frame = 1
Query:   31 VAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 501
            VA+KVWAE FFY+AENNVMFEGILLKPSMVTPGAECK++ATP+QV++YTLKLLHRRIPPAVPGIMFLSGGQSEVEAT NLNAMNQGPNPWHVSFSYARALQNTCLKTWGG+PENVKAAQD LL RAKANSLAQLGKYT +GE+ EAK+GMFVK Y Y
Sbjct:  232 VAQKVWAETFFYMAENNVMFEGILLKPSMVTPGAECKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAEAKEGMFVKNYVY 388          
BLAST of CX302544 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 289.271 bits (739), Expect = 9.417e-78
Identity = 140/157 (89.17%), Postives = 148/157 (94.27%), Query Frame = 1
Query:   31 VAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 501
            VA+KVWAEVFFYLA+NNVMFEGILLKPSMVTPGAE  ++ATP+QVA YTLKLL  RIPPAVPGIMFLSGGQSE+EATLNLNAMNQ PNPWHVSFSYARALQNTCLKTWGG+ ENVKAAQD LL RAKANSLAQLGKYTGEGESEEAK+GMFVKGYTY
Sbjct:  243 VAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAEATDRATPEQVASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 399          
BLAST of CX302544 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 2.835e-74
Identity = 135/157 (85.99%), Postives = 146/157 (92.99%), Query Frame = 1
Query:   31 VAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 501
            VA+KVWAEVF+YLAENNV FEGILLKPSMVTPGAE K+KA+P +VAEYTL LLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN+ PNPWHVSFSYARALQNT LKTWGG PENVKAAQ+ LL RAK+NSLAQLGKY G+GESEEAKK +FVKGY+Y
Sbjct:  200 VAQKVWAEVFYYLAENNVQFEGILLKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGESEEAKKELFVKGYSY 356          
BLAST of CX302544 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 266.929 bits (681), Expect = 5.005e-71
Identity = 132/157 (84.08%), Postives = 143/157 (91.08%), Query Frame = 1
Query:   31 VAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 501
            VA+KVWAEVF+YLAENNV FEGILLKPSMVTPGAE K+KA+P +VAEYTL LLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN+ PNPWHVSFSYARALQNT LKTWGG PENVKAAQ+ LL RAK+NSLAQLGKY G+GESEEAKK    +GY+Y
Sbjct:  194 VAQKVWAEVFYYLAENNVQFEGILLKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEEAKKDC-CQGYSY 349          
BLAST of CX302544 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 4.237e-70
Identity = 125/157 (79.62%), Postives = 143/157 (91.08%), Query Frame = 1
Query:   31 VAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 501
            VA+KVW+EVFFYLA+NNVMFEGILLKPSMVTPGAE K KA+P+ VA++TL +L RR+PPAVPGIMFLSGGQSE EATLNLNAMNQ PNPWHVSFSYARALQN+ L+TW G+PE ++A+Q  LL RAKANSLAQLGKY+ EGE+E+AKKGMFVKGYTY
Sbjct:  235 VAEKVWSEVFFYLAQNNVMFEGILLKPSMVTPGAEHKNKASPETVADFTLTMLKRRVPPAVPGIMFLSGGQSEAEATLNLNAMNQSPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGENEDAKKGMFVKGYTY 391          
BLAST of CX302544 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 223.016 bits (567), Expect = 8.288e-58
Identity = 118/153 (77.12%), Postives = 124/153 (81.05%), Query Frame = 1
Query:   31 VAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVK 489
            VA++VWAEVFF LAENNV+ EG  LKPSMV PGA    K  P+QVA+Y LKLLHRR  P VPGIM LSGGQSEVEATLNLNAMNQ PNPWHVSFSYARALQNTCLKTW    ENVK AQD     AK+NSLAQLGKYTGEGESEE KK MFVK
Sbjct:  240 VAQQVWAEVFFNLAENNVLLEGSSLKPSMVGPGALSARKGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWVEGQENVK-AQD--FACAKSNSLAQLGKYTGEGESEERKKDMFVK 389          
BLAST of CX302544 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.282e-50
Identity = 102/157 (64.97%), Postives = 118/157 (75.16%), Query Frame = 1
Query:   31 VAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 501
            V + +WAE F Y+A+N VM +GILLKP+MVTPGA+CK KA P +VAEYTLK+L  R PP VPGIMFLSGGQSE+E+TLNLNAMNQ PNPWHVSFSYARAL NT LKTW   P  V+A +     R KANS AQ GKY    E +EA +GM+ KG  Y
Sbjct:  218 VQEAIWAETFKYMADNKVMLQGILLKPAMVTPGADCKNKAGPAKVAEYTLKMLAARAPP-VPGIMFLSGGQSELESTLNLNAMNQSPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTEGKEAAQGMYEKGKGY 372          
BLAST of CX302544 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 4.881e-42
Identity = 84/158 (53.16%), Postives = 113/158 (71.52%), Query Frame = 1
Query:   31 VAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPN-PWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 501
            V +KV A VF  L +++++ EG LLKP+MV  G +C  KAT +Q+ ++T++ L R +PPA+ G++FLSGGQ+E+EAT NLNAMN  PN PW +SFSY RALQ + + TW G   NV+AA+   L RAK NSLAQLGKYTGE  +  A + ++VK Y Y
Sbjct:  200 VTEKVLAAVFKALNDHHILLEGALLKPNMVVNGTDCPIKATSEQIGKFTVRTLQRTVPPALTGVVFLSGGQTEIEATANLNAMNVLPNRPWALSFSYGRALQASVISTWKGESANVEAARKVYLHRAKCNSLAQLGKYTGEESTGSASESLYVKDYKY 357          
BLAST of CX302544 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.569e-40
Identity = 85/159 (53.46%), Postives = 110/159 (69.18%), Query Frame = 1
Query:   31 VAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--QGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 501
            V+++V A  +  L +++V+ EG  LKP++VTPG+E K K TP+ +AEYT++ L R +P AVPG+MFLSGGQSE EATLNLNAMN  +   PW +SFSY RALQ + LK W G+ ENV  AQ+  L RAK NS A LGKY G     +A + + VK Y Y
Sbjct:  200 VSERVLAACYKALNDHHVLLEGTSLKPNIVTPGSESK-KVTPEVIAEYTVRTLQRTVPQAVPGVMFLSGGQSEEEATLNLNAMNKLETKKPWTLSFSYGRALQQSTLKAWQGKEENVAKAQEVFLARAKGNSEATLGKYQGGAGGADASESLHVKDYKY 357          
The following BLAST results are available for this feature:
BLAST of CX302544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALFC2_ARATH4.993e-7990.45Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC_ORYSJ2.478e-7887.90Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC1_ARATH9.417e-7889.17Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC1_PEA2.835e-7485.99Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC2_PEA5.005e-7184.08Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC3_ARATH4.237e-7079.62Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC_SPIOL8.288e-5877.12Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC_CHLRE1.282e-5064.97Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_DICDI4.881e-4253.16Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
ALF_SPIOL4.569e-4053.46Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank descriptionC07006H05SK SaltLeaf1 Citrus clementina cDNA clone C07006H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX302544 ID=CX302544; Name=CX302544; organism=Citrus clementina; type=EST; length=579bp
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTAGCTAAGAAGGTTTGGGC
TGAAGTTTTCTTCTACCTTGCTGAGAACAATGTCATGTTTGAGGGTATTC
TCCTCAAGCCTAGCATGGTCACTCCTGGTGCTGAATGCAAGGAGAAGGCC
ACACCACAACAGGTTGCTGAGTACACACTCAAGCTCCTTCACAGGAGAAT
CCCTCCAGCTGTCCCCGGAATCATGTTCTTGTCTGGTGGGCAATCTGAGG
TTGAGGCAACCCTCAACTTGAACGCCATGAACCAAGGTCCCAACCCATGG
CACGTATCTTTCTCTTATGCCAGAGCTCTCCAAAACACCTGCCTGAAGAC
ATGGGGTGGCAGGCCAGAGAATGTCAAGGCAGCTCAGGATACTCTGCTCA
CCCGTGCCAAGGCCAACTCACTTGCTCAGCTCGGCAAGTACACTGGCGAG
GGAGAATCAGAGGAGGCCAAGAAAGGAATGTTCGTCAAGGGATACACCTA
CTAAATTTGTTAGCACGAAGATCATAAGAATGGTGAAGAAATTTGAAATG
AGTAGTCATCTCAAATGTGTTAATGCTTT
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