CX305166

Overview
NameCX305166
Unique NameCX305166
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length535
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10111 contig Ccv1_Contig10111:712..1246. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX305166 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.363e-21
Identity = 56/165 (33.94%), Postives = 93/165 (56.36%), Query Frame = 2
Query:   44 MKTLLATILSFLILALASCPLLVLGASSVPEPLLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLILSPYDNST-IVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNL 535
            MKT  A +L  L+ A  S       A++   P+LD +G+++++ +QY+++S+I                 CP  V+Q  S +  G  +I S  D+   +VR STD+N+ FV +    + C+   +W++DNYD S+G+W++TT G+ G PG  TL +WFK+EK  +
Sbjct:    1 MKTATAVVL--LLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRD--RLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGV 161          
BLAST of CX305166 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 9.291e-18
Identity = 56/168 (33.33%), Postives = 86/168 (51.19%), Query Frame = 2
Query:   44 MKTLLATILSFL----ILALASCPLLVLGASSVPEPLLDVNGNKVESTLQYHIVSAI--WXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLILSPYD-NSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEK 526
            MK L    LSF     +LA A+ PLL   A S P P+LD++G K+ +   Y+IV  +                   CP  V+Q    +   + L   P +    +VR STDLN+ F   +    +     +W++D YD S+G++F+T GG+ G+PG ET+ +WFK+E+
Sbjct:    1 MKELTMLSLSFFFVSALLAAAANPLLS-AADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPC--RWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE 165          
BLAST of CX305166 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.005e-12
Identity = 48/138 (34.78%), Postives = 69/138 (50.00%), Query Frame = 2
Query:  131 PEPLLDVNGNKVESTLQYHIVSAIW-XXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLILSPYDN--STIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNL 535
            P+P++D++G  V   + Y +VSAIW                 CPL V+Q P     G+ +I S   N    IV ES DLN++F    + +  CNE   WKVD +    G W +T GG  G+ G E+  + FK++K  L
Sbjct:    3 PKPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDP--FDNGEPIIFSAIKNVKDNIVFESVDLNVKF----NITINCNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAGL 133          
The following BLAST results are available for this feature:
BLAST of CX305166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ASP_THECC2.363e-2133.9421 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU9.291e-1833.33Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA2.005e-1234.78Latex serine proteinase inhibitor OS=Carica papaya... [more]
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Properties
Property NameValue
Genbank descriptionC18002A05Rv Drought1 Citrus clementina cDNA clone C18002A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX305166 ID=CX305166; Name=CX305166; organism=Citrus clementina; type=EST; length=535bp
GCGGGGACGCATCAAACAGATATCATAGCTTTGAAATAACAAAATGAAGA
CTTTATTAGCAACAATACTCTCCTTCCTCATCCTTGCCTTGGCCTCATGC
CCTCTATTGGTCTTGGGCGCCTCATCAGTTCCTGAACCTCTCCTTGATGT
CAATGGCAACAAGGTTGAATCCACTCTTCAGTACCATATAGTCTCAGCCA
TCTGGGGAGCTGGCGGCGGTGGAGTTAGCCTACACGGAGGCAGAAACGGA
TACTGTCCGTTGGATGTTATCCAATTACCCTCTGCTATCCAATGGGGAAA
GAAATTAATACTGTCACCATATGACAATTCTACAATTGTCAGAGAATCCA
CTGATCTCAACTTGAGATTCGTAGGGTTACTATCTGGAAGTAAGCAATGT
AACGAGCTACCGTTGTGGAAAGTTGATAACTATGACGCTTCATCAGGCAG
ATGGTTTATAACAACCGGGGGACTTGATGGTCACCCTGGAGCTGAAACGT
TGCTAAATTGGTTTAAGCTTGAGAAAACTAATCTA
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