CX305183

Overview
NameCX305183
Unique NameCX305183
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length605
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig860 contig Ccv1_Contig860:6..610. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX305183 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.977e-28
Identity = 66/185 (35.68%), Postives = 105/185 (56.76%), Query Frame = 3
Query:   57 ATTLSFLILALASNSLLVLGTSSVPEPLLDVHGNKVESTLKYYIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYNNST-IVRESTDLNLRFSVLLSGRD-YCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKLCNNV 605
            AT +  L+ A  S S      ++   P+LD  G+++++ ++YY++S+I                 CP  V+Q  SD+ NG  +  S  ++   +VR STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G     YK   CPSVC+SC  LC+++
Sbjct:    4 ATAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVL--GYKFRFCPSVCDSCTTLCSDI 183          
BLAST of CX305183 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 5.951e-25
Identity = 66/189 (34.92%), Postives = 99/189 (52.38%), Query Frame = 3
Query:   48 ISLATTLSFLILALASNSLLVLGTSSVPEPLLDVHGNKVESTLKYYIVSAI--WXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKLCNNV 605
            +SL+      +LA A+N LL     S P P+LD+ G K+ +   YYIV  +                   CP  V+Q   ++ +   L   P N    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+     G YK+V CP+VC SC   C +V
Sbjct:    7 LSLSFFFVSALLAAAANPLLS-AADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCG-SGFYKLVFCPTVCGSCKVKCGDV 191          
BLAST of CX305183 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.323e-19
Identity = 59/162 (36.42%), Postives = 84/162 (51.85%), Query Frame = 3
Query:  129 PEPLLDVHGNKVESTLKYYIVSAIWXXXXXXXXXXXXXXXY-CPLDVIQLPSDMQNGIELTLSPYNN--STIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKLCNNV 605
            P+P++D+ G  V   + Y++VSAIW                 CPL V+Q P D  NG  +  S   N    IV ES DLN++F++ ++    CNE   WKVD +    G W +T GG  G+ G E+  + FK++K G  P +YK   CPS   + +  CNNV
Sbjct:    3 PKPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAG-LPFSYKFHFCPSYPRTRLIPCNNV 156          
BLAST of CX305183 vs. ExPASy Swiss-Prot
Match: SPORB_IPOBA (Sporamin B OS=Ipomoea batatas GN=GSPO-B1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.388e-11
Identity = 48/159 (30.19%), Postives = 74/159 (46.54%), Query Frame = 3
Query:  117 TSSVPEPLLDVHGNKVESTLKYYIVSAIW--XXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESC 584
            T+S   P+LD++G++V +   YYIVSAIW                  C  DVI   SD  NG  +T++P +  +T+V  ST    RF++  +    C     W +  +D+ SG++F+  G            N FK+E + +    YKI +C    E C
Sbjct:   34 TASSETPVLDINGDEVRAGENYYIVSAIWGAGGGGLRLVRLDSSSNECASDVIVSRSDFDNGDPITITPADPEATVVMPSTYQTFRFNI--ATNKLCVNNVNWGI-KHDSESGQYFVKAGEF-----VSDNSNQFKIEVVNDNLNAYKISYCQFGTEKC 184          
BLAST of CX305183 vs. ExPASy Swiss-Prot
Match: SPOR1_IPOBA (Sporamin A OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.343e-11
Identity = 46/159 (28.93%), Postives = 75/159 (47.17%), Query Frame = 3
Query:  120 SSVPEPLLDVHGNKVESTLKYYIVSAIW-XXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN---NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESC 584
            +S   P+LD++G++V +   YY+VSAIW                 C  DVI  P+D+ NG  +T++P      ST+V  ST    RF++  +    C     W +  +D+ASG++F+  G            N FK+E +     +YK+ +C    + C
Sbjct:   37 ASSETPVLDINGDEVRAGGNYYMVSAIWGAGGGGLRLAHLDMMSKCATDVIVSPNDLDNGDPITITPATADPESTVVMASTYQTFRFNI--ATNKLCVNNVNWGI-QHDSASGQYFLKAGEF-----VSDNSNQFKIELVDANLNSYKLTYCQFGSDKC 187          
The following BLAST results are available for this feature:
BLAST of CX305183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ASP_THECC1.977e-2835.6821 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU5.951e-2534.92Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA8.323e-1936.42Latex serine proteinase inhibitor OS=Carica papaya... [more]
SPORB_IPOBA6.388e-1130.19Sporamin B OS=Ipomoea batatas GN=GSPO-B1 PE=2 SV=1[more]
SPOR1_IPOBA8.343e-1128.93Sporamin A OS=Ipomoea batatas PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionC18002B11Rv Drought1 Citrus clementina cDNA clone C18002B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX305183 ID=CX305183; Name=CX305183; organism=Citrus clementina; type=EST; length=605bp
GCGGGGGCATCAAACAGATATATAGCTTTGAAAACAACAAAATGAAGATT
TCATTAGCAACAACACTCTCTTTCCTTATCCTTGCCTTGGCCTCAAACTC
TTTGTTGGTCTTGGGCACCTCATCAGTTCCTGAACCTCTCCTTGATGTCC
ACGGAAACAAGGTCGAATCCACCCTTAAGTACTACATAGTCTCAGCCATC
TGGGGAGCTGGCGGTGGTGGAGTTAGCCTACACGGTGGCAGAAACGGATA
TTGTCCGCTGGACGTTATCCAGTTACCTTCTGATATGCAAAATGGAATCG
AATTAACACTGTCACCGTATAACAATTCTACAATTGTCCGAGAATCCACT
GATCTCAACTTGAGATTCTCAGTGTTGCTATCTGGACGTGACTATTGTAA
CGAACAACCGTTGTGGAAAGTTGATAATTATGACGCGGCATCAGGCAAAT
GGTTTATAACAACCGGGGGACTTGATGGTCACCCTGGAGCTGAAACTTTG
CTAAATTGGTTTAAGCTTGAGAAAATTGGAAATTTTCCAGGTACATACAA
AATCGTTCATTGTCCATCCGTTTGCGAGTCTTGTGTCAAACTCTGCAACA
ACGTT
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