CX305238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX305238 vs. ExPASy Swiss-Prot
Match: ATPD_TOBAC (ATP synthase delta chain, chloroplastic OS=Nicotiana tabacum GN=ATPD PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.485e-15 Identity = 38/125 (30.40%), Postives = 74/125 (59.20%), Query Frame = -2 Query: 172 SLEAVQRDVLKLSRLLKNEQIQAVCADPFVGDKDKGQIVKELSSSWKVNRYLAALLRMLIERNKVAMVSDVLEEFQRIYDDLIGTRVVFVSSAKKMEEDQLFHIAKRVQNLCGAAQVKIRNLIQE 546 +LE D+ K+ ++ +E + P VG++ K ++V E+ SS + ++A L +L++ +V ++ ++++EF+++Y+ L T + V+S K+E L IAK VQ L G+ V+I+ +I E Sbjct: 82 TLEQTTADLEKIEKISDDEAVFNFFVSPIVGEEKKRELVDEIVSSSSIQPHVANFLNILVDMKRVELIKEIVKEFEKVYNTLTDTELAVVTSVVKLESQHLAQIAKGVQRLTGSKNVRIKTVIDE 206
BLAST of CX305238 vs. ExPASy Swiss-Prot
Match: ATPD_SPIOL (ATP synthase delta chain, chloroplastic OS=Spinacia oleracea GN=ATPD PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 2.226e-14 Identity = 39/123 (31.71%), Postives = 71/123 (57.72%), Query Frame = -2 Query: 178 SLEAVQRDVLKLSRLLKNEQIQAVCADPFVGDKDKGQIVKELSSSWKVNRYLAALLRMLIERNKVAMVSDVLEEFQRIYDDLIGTRVVFVSSAKKMEEDQLFHIAKRVQNLCGAAQVKIRNLI 546 +LEA DV KL R+ E + A+P + +K ++ E+ ++ + + A + +LI+ ++ +V ++L EF+ +++ + GT V V+S K+E D L IAK VQ + GA V+I+ +I Sbjct: 91 TLEATNSDVEKLIRIFSEEPVYYFFANPVISIDNKRSVLDEIITTSGLQPHTANFINILIDSERINLVKEILNEFEDVFNKITGTEVAVVTSVVKLENDHLAQIAKGVQKITGAKNVRIKTVI 213
BLAST of CX305238 vs. ExPASy Swiss-Prot
Match: ATPD_PEA (ATP synthase delta chain, chloroplastic OS=Pisum sativum GN=ATPD PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 7.160e-13 Identity = 37/123 (30.08%), Postives = 71/123 (57.72%), Query Frame = -2 Query: 178 SLEAVQRDVLKLSRLLKNEQIQAVCADPFVGDKDKGQIVKELSSSWKVNRYLAALLRMLIERNKVAMVSDVLEEFQRIYDDLIGTRVVFVSSAKKMEEDQLFHIAKRVQNLCGAAQVKIRNLI 546 +L+A+ D K+ +L + ++ + P V D K Q++ E +++ + L +LI+ ++ M+ D+++EF+ +Y+ L T +V V+S K+E L IAK+VQ L GA +V+ + L+ Sbjct: 85 TLDAITADFDKIEQLFSDPKVFDYFSSPIVEDSTKRQLIGEFATTSGFQPHTHNFLNVLIDSKRIDMIIDIIKEFEFVYNTLTDTELVVVTSVVKLESHHLAQIAKQVQKLTGAKKVRTKTLL 207
BLAST of CX305238 vs. ExPASy Swiss-Prot
Match: ATPD_CHLRE (ATP synthase delta chain, chloroplastic OS=Chlamydomonas reinhardtii GN=ATPD PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.062e-12 Identity = 37/123 (30.08%), Postives = 75/123 (60.98%), Query Frame = -2 Query: 178 LEAVQRDVLKLSRLLK-NEQIQAVCADPFVGDKDKGQIVKELSSSWKVNRYLAALLRMLIERNKVAMVSDVLEEFQRIYDDLIGTRVVFVSSAKKMEEDQLFHIAKRVQNLCGAAQVKIRNLI 543 LEAV DV ++ L+K N ++ A+ +P V K ++ +++ +Y L +L+E++++++V ++ E F+ +Y + T+V + SA K+E++Q F IAK++Q L G+ +K++ +I Sbjct: 56 LEAVHADVDAVAGLMKENAKLSALIMNPVVESDKKRAVLAKIAKEAGFQQYTINWLNLLVEKDRLSLVPEICECFEDLYCQMTDTQVATLRSAVKLEQEQQFLIAKKLQELTGSKNIKLKPVI 178 The following BLAST results are available for this feature:
BLAST of CX305238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX305238 ID=CX305238; Name=CX305238; organism=Citrus clementina; type=EST; length=547bpback to top |