CX305594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX305594 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 4.480e-39 Identity = 74/119 (62.18%), Postives = 95/119 (79.83%), Query Frame = -2 Query: 124 DEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKKIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNKNGAGMVPYELLKPFSEPGVTGKGVPYSIFI 480 D++ K F+ +PE LL + PSQ+QA KVMA LD+LS+HSPDEEY+G+ EPAW +P++ AAFEKF G+L E EG ID RN +P+ +N+ GAG+VPYELLKPFSEPGVTG+G+P SI I Sbjct: 778 DDEMKKFMARPEEVLLQSLPSQMQAIKVMATLDILSSHSPDEEYMGEYAEPAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSEPGVTGRGIPNSISI 896
BLAST of CX305594 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 5.851e-39 Identity = 79/122 (64.75%), Postives = 93/122 (76.23%), Query Frame = -2 Query: 124 DPFDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKKIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNKNGAGMVPYELLKPFSEPGVTGKGVPYSIFI 489 DP DE K F E PE LL T+PSQ QAT VM LD+LSTHSPDEEY+G++ E +W +PVINAAFE+F+GKL LEG+ID RN + L+N+ GAG+V YELLKP SE GVTG GVPYSI I Sbjct: 775 DPTDEALKEFYESPEKVLLKTYPSQKQATLVMVTLDLLSTHSPDEEYIGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEHGVTGMGVPYSISI 896
BLAST of CX305594 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 6.928e-32 Identity = 64/113 (56.64%), Postives = 82/113 (72.57%), Query Frame = -2 Query: 124 FLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKKIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNKNGAGMVPYELLKPFSEPGVTGKGVPYSIFI 462 FL+ P+ AL FPSQ+QAT VMA+LDVLSTHS DEEYLG + W D + AA+ F +L E+EG+ID RN D KL+N+ GAG++PY+L+KPFS+ GVTG G+P S I Sbjct: 829 FLDNPDQALRECFPSQVQATVVMAVLDVLSTHSTDEEYLGGEQTRPWNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTGMGIPNSTSI 941
BLAST of CX305594 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 9.048e-32 Identity = 63/113 (55.75%), Postives = 83/113 (73.45%), Query Frame = -2 Query: 124 FLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKKIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNKNGAGMVPYELLKPFSEPGVTGKGVPYSIFI 462 FL+ P+ AL FPSQ+QAT VMA+LDVLS+HS DEEYLG + W D + AA++ F +L E+EG+ID RN D KL+N+ GAG++PY+L+KPFS+ GVTG G+P S I Sbjct: 812 FLDNPDQALRECFPSQVQATVVMAVLDVLSSHSTDEEYLGGEQTRPWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDSGVTGMGIPNSTSI 924
BLAST of CX305594 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 8.764e-27 Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = -2 Query: 124 DPFDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKKIEPA-WREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNKNGAGMVPYELLKPFSEPGVTGKGVPYSIFI 489 D D ++ F+E P+ ++ PS +Q TK MA++D LSTHSPDEEY+G++ +P+ W D I AF F ++ +E ID RN DP RN+ GAG++PYEL+ P SEPGVT +GVP S+ I Sbjct: 804 DESDPEFTSFIEDPQKYFFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAGVLPYELMAPSSEPGVTCRGVPNSVSI 926
BLAST of CX305594 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.952e-26 Identity = 58/121 (47.93%), Postives = 83/121 (68.60%), Query Frame = -2 Query: 124 DEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLG--KKIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNKNGAGMVPYELLKPFSEPGVTGKGVPYSIFI 480 D ++ F+ P+ + L + P+Q+QATKVMA+ + LSTHSPDEEYL ++++ W +D + F KF +L+++E I+ RN D KL+N+ GAGM PYELL P S GVTG+G+P SI I Sbjct: 797 DPDYEMFMRNPQYSFLGSLPTQLQATKVMAVQETLSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPHGVTGRGIPNSISI 917
BLAST of CX305594 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 5.681e-26 Identity = 59/123 (47.97%), Postives = 81/123 (65.85%), Query Frame = -2 Query: 124 DPFDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKKIEPA-WREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNKNGAGMVPYELLKPFSEPGVTGKGVPYSIFI 489 D D ++ F+ PE ++ PS Q +K MA++D LSTHSPDEEY+G++ +P+ W D I AF F ++ +E I+ RNADP RN+ GAG++PYELL P SEPGVT +GVP S+ I Sbjct: 797 DESDPEYASFISHPEKYYFSSMPSLAQTSKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRRNRCGAGVLPYELLVPSSEPGVTCRGVPNSVSI 919
BLAST of CX305594 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 6.281e-25 Identity = 61/123 (49.59%), Postives = 78/123 (63.41%), Query Frame = -2 Query: 124 FLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKKIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNKNGAGMVPYELLK----------PFSEPGVTGKGVPYSIFI 462 F+E PE LL+TFPSQ Q+ V+AILD+LSTHS DEEY+G EPAW +D VIN AFE+F+ ++ +D N DP +N++GAGMVPY LL+ P E V G+P SI I Sbjct: 814 FVEAPEKVLLDTFPSQYQSAIVLAILDLLSTHSSDEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936
BLAST of CX305594 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 9.069e-24 Identity = 53/119 (44.54%), Postives = 72/119 (60.50%), Query Frame = -2 Query: 124 DEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKKIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNKNGAGMVPYELLKPFSEPGVTGKGVPYSIFI 480 D ++ + P L+ PS Q T M ++D LSTHS DEEYLG++ + AW DP AA +F + E I+ RNADP RN+ GAG++PYEL+ P S PG+T +GVP S+ I Sbjct: 781 DPEYAHLVADPHRFFLSALPSLTQTTTFMTVIDTLSTHSADEEYLGERPDEAWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 899
BLAST of CX305594 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 4.977e-22 Identity = 56/120 (46.67%), Postives = 71/120 (59.17%), Query Frame = -2 Query: 124 QWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKKIEPA---WREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNKNGAGMVPYELLKPFSEPGVTGKGVPYSIFI 474 ++ FL P LN P ++ATK MA++D LSTHSPDEEYLG+ + W D AA F + E I+ RNAD +N+ GAG++PYELL P S PGVT +GVP SI I Sbjct: 799 EYAAFLADPHRFFLNAMPGVLEATKFMAVVDTLSTHSPDEEYLGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 918 The following BLAST results are available for this feature:
BLAST of CX305594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305594 ID=CX305594; Name=CX305594; organism=Citrus clementina; type=EST; length=490bpback to top |