CX305780

Overview
NameCX305780
Unique NameCX305780
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length308
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig865 contig Ccv1_Contig865:1..308. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX305780 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 6.078e-29
Identity = 57/73 (78.08%), Postives = 66/73 (90.41%), Query Frame = 1
Query:   88 VENFPVINLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRA 306
            +E+FPVIN+E +NG ERAA +  IN+ACENWGFFELVNHGI PE MDTVER+TKAHY+KCMEQRFKELVAS+A
Sbjct:    1 MESFPVINMEKMNGEERAATMGLINDACENWGFFELVNHGIPPELMDTVERVTKAHYKKCMEQRFKELVASKA 73          
BLAST of CX305780 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 6.078e-29
Identity = 56/72 (77.78%), Postives = 64/72 (88.89%), Query Frame = 1
Query:   88 VENFPVINLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASR 303
            +ENFP+INLE +NGAER A +EKIN+ACENWGFFELVNHGI  E MDTVE+LTK HY+KCMEQRFKELVA +
Sbjct:    1 MENFPIINLEKLNGAERVATMEKINDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVAKK 72          
BLAST of CX305780 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.720e-28
Identity = 55/72 (76.39%), Postives = 63/72 (87.50%), Query Frame = 1
Query:   88 VENFPVINLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASR 303
            +ENFP+INLEN+NG ERA  +E I +ACENWGFFELVNHGI  E MDTVE+LTK HY+KCMEQRFKELVAS+
Sbjct:    1 MENFPIINLENLNGDERAKTMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASK 72          
BLAST of CX305780 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.955e-27
Identity = 54/72 (75.00%), Postives = 63/72 (87.50%), Query Frame = 1
Query:   88 VENFPVINLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASR 303
            +ENFP+INLE +NG+ER A +E I +ACENWGFFELVNHGI  E MDTVE+LTK HY+KCMEQRFKELVAS+
Sbjct:    1 MENFPIINLEKLNGSERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASK 72          
BLAST of CX305780 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.955e-27
Identity = 53/73 (72.60%), Postives = 64/73 (87.67%), Query Frame = 1
Query:   88 VENFPVINLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRA 306
            +ENFP+I+L+ +NG ERAA +E I +ACENWGFFELVNHGI  E MDTVE++TK HY+KCMEQRFKELVAS+A
Sbjct:    1 MENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKA 73          
BLAST of CX305780 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.335e-27
Identity = 53/72 (73.61%), Postives = 63/72 (87.50%), Query Frame = 1
Query:   88 VENFPVINLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASR 303
            +ENFP+INLE +NG+ERA  +E I +ACENWGFFELVNHGI  E MDTVE++TK HY+KCMEQRFKELVAS+
Sbjct:    1 MENFPIINLEKLNGSERADTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASK 72          
BLAST of CX305780 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.689e-27
Identity = 53/72 (73.61%), Postives = 63/72 (87.50%), Query Frame = 1
Query:   88 VENFPVINLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASR 303
            +ENFP+INLE +NG  R A +EKI +ACENWGFFELV+HGI  EF+DTVERLTK HYR+C+EQRFKELVAS+
Sbjct:    1 MENFPIINLEGLNGEGRKATMEKIKDACENWGFFELVSHGIPTEFLDTVERLTKEHYRQCLEQRFKELVASK 72          
BLAST of CX305780 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.689e-27
Identity = 54/72 (75.00%), Postives = 62/72 (86.11%), Query Frame = 1
Query:   88 VENFPVINLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASR 303
            +ENFP+INLEN+ GAER A +E I +ACENWGFFELVNHGI  E MDTVE+ TK HY+KCMEQRFKELVAS+
Sbjct:    1 MENFPIINLENLCGAERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCMEQRFKELVASK 72          
BLAST of CX305780 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 7.430e-27
Identity = 53/72 (73.61%), Postives = 62/72 (86.11%), Query Frame = 1
Query:   88 VENFPVINLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASR 303
            +ENFP+INLE +NG ERA  +E I +ACENWGFFELVNHGI  E MDTVE++TK HY+KCMEQRFKELVAS+
Sbjct:    1 MENFPIINLEKLNGDERANTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASK 72          
BLAST of CX305780 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.816e-26
Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = 1
Query:   88 VENFPVINLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASR 303
            +E FPVI++E +NG ERA  +EKI +ACENWGFFELVNHGI  E MDTVERLTK HY KCMEQRFKE+VA++
Sbjct:    1 MEAFPVIDMEKLNGEERAPTMEKIKDACENWGFFELVNHGISHELMDTVERLTKEHYNKCMEQRFKEMVATK 72          
The following BLAST results are available for this feature:
BLAST of CX305780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
ACCO_DIOKA6.078e-2978.081-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO2_SOLLC6.078e-2977.781-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO4_SOLLC6.720e-2876.391-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO3_PETHY1.955e-2775.001-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO1_PETHY1.955e-2772.601-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO_TOBAC3.335e-2773.611-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO_PRUMU5.689e-2773.611-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO4_PETHY5.689e-2775.001-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_SOLLC7.430e-2773.611-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO_ACTDE4.816e-2672.221-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]

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Properties
Property NameValue
Genbank descriptionC18010B09Rv Drought1 Citrus clementina cDNA clone C18010B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX305780 ID=CX305780; Name=CX305780; organism=Citrus clementina; type=EST; length=308bp
GCGGGGACTAATTAACAAGCTCACAAACACATACACAAACCCAAACACTC
ACAAACACACAGCTTGTTAAAGAAAGAATTCAGAGATGTGGAGAACTTCC
CCGTTATCAACTTGGAGAACATCAATGGTGCTGAAAGAGCGGCTATCTTG
GAGAAGATCAACGAGGCCTGTGAGAACTGGGGCTTCTTTGAGCTGGTGAA
TCATGGAATTGAGCCGGAGTTTATGGACACAGTGGAGAGATTGACCAAGG
CGCATTACAGAAAATGTATGGAGCAAAGATTCAAGGAGCTTGTTGCAAGC
AGGGCACT
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