CX306167
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX306167 vs. ExPASy Swiss-Prot
Match: RS33_ARATH (40S ribosomal protein S3-3 OS=Arabidopsis thaliana GN=RPS3C PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.925e-21 Identity = 45/62 (72.58%), Postives = 53/62 (85.48%), Query Frame = -3 Query: 306 EYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVAT 491 EYID+AVRHVLLRQGVLG+KVKIML WDP GKQGP TPLPD+V IH+PK+++ Y+ P V T Sbjct: 166 EYIDAAVRHVLLRQGVLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVT 227
BLAST of CX306167 vs. ExPASy Swiss-Prot
Match: RS31_ARATH (40S ribosomal protein S3-1 OS=Arabidopsis thaliana GN=RPS3A PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.631e-20 Identity = 45/64 (70.31%), Postives = 50/64 (78.12%), Query Frame = -3 Query: 300 EYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDI 491 EYID+AVRHVLLRQGVLGIKVKIML WDP GK GP TPLPD+V IH+PKD+ Y P A + Sbjct: 166 EYIDAAVRHVLLRQGVLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAAAPV 229
BLAST of CX306167 vs. ExPASy Swiss-Prot
Match: RS32_ARATH (40S ribosomal protein S3-2 OS=Arabidopsis thaliana GN=RPS3B PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.743e-20 Identity = 46/61 (75.41%), Postives = 49/61 (80.33%), Query Frame = -3 Query: 309 EYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVA 491 EYIDSAVRHVLLRQGVLGIKVK+ML WDP G GP TPLPD+V IHSPK+EE P VA Sbjct: 166 EYIDSAVRHVLLRQGVLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQVA 226
BLAST of CX306167 vs. ExPASy Swiss-Prot
Match: RS3_AMBME (40S ribosomal protein S3 OS=Ambystoma mexicanum GN=RPS3 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.428e-16 Identity = 40/52 (76.92%), Postives = 45/52 (86.54%), Query Frame = -3 Query: 339 NEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 494 N Y+D+AVRHVLLRQGVLGIKVKIML+WDP+GK GP PLPD V+I PKDE Sbjct: 165 NYYVDTAVRHVLLRQGVLGIKVKIMLAWDPSGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CX306167 vs. ExPASy Swiss-Prot
Match: RS3_RAT (40S ribosomal protein S3 OS=Rattus norvegicus GN=Rps3 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16 Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = -3 Query: 339 NEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 494 N Y+D+AVRHVLLRQGVLGIKVKIML WDP+GK GP PLPD V+I PKDE Sbjct: 165 NYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CX306167 vs. ExPASy Swiss-Prot
Match: RS3_MOUSE (40S ribosomal protein S3 OS=Mus musculus GN=Rps3 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16 Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = -3 Query: 339 NEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 494 N Y+D+AVRHVLLRQGVLGIKVKIML WDP+GK GP PLPD V+I PKDE Sbjct: 165 NYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CX306167 vs. ExPASy Swiss-Prot
Match: RS32_XENLA (40S ribosomal protein S3-B OS=Xenopus laevis GN=rps3-B PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16 Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = -3 Query: 339 NEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 494 N Y+D+AVRHVLLRQGVLGIKVKIML WDP+GK GP PLPD V+I PKDE Sbjct: 165 NYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CX306167 vs. ExPASy Swiss-Prot
Match: RS31_XENLA (40S ribosomal protein S3-A OS=Xenopus laevis GN=rps3-A PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16 Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = -3 Query: 339 NEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 494 N Y+D+AVRHVLLRQGVLGIKVKIML WDP+GK GP PLPD V+I PKDE Sbjct: 165 NYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CX306167 vs. ExPASy Swiss-Prot
Match: RS3_PONAB (40S ribosomal protein S3 OS=Pongo abelii GN=RPS3 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.181e-16 Identity = 40/52 (76.92%), Postives = 43/52 (82.69%), Query Frame = -3 Query: 339 NEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 494 N Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP PLPD V+I PKDE Sbjct: 165 NYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CX306167 vs. ExPASy Swiss-Prot
Match: RS3_PIG (40S ribosomal protein S3 OS=Sus scrofa GN=RPS3 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.181e-16 Identity = 40/52 (76.92%), Postives = 43/52 (82.69%), Query Frame = -3 Query: 339 NEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 494 N Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP PLPD V+I PKDE Sbjct: 165 NYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216 The following BLAST results are available for this feature:
BLAST of CX306167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306167 ID=CX306167; Name=CX306167; organism=Citrus clementina; type=EST; length=496bpback to top |