CX306358

Overview
NameCX306358
Unique NameCX306358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length503
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX306358 vs. ExPASy Swiss-Prot
Match: TOM6_ARATH (Mitochondrial import receptor subunit TOM6 homolog OS=Arabidopsis thaliana GN=TOM6 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.033e-13
Identity = 32/42 (76.19%), Postives = 38/42 (90.48%), Query Frame = 1 
Query:   97 MFPGMFMKKPDKAAALKQLRSHVAMFGTWVVVIRVTPYLLHY 222
            MFPGMFM+KPDKA ALKQLR+HVA+FG+WVV+IR  PY+L Y
Sbjct:    1 MFPGMFMRKPDKAEALKQLRTHVALFGSWVVIIRAAPYVLSY 42
The following BLAST results are available for this feature:
BLAST of CX306358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TOM6_ARATH2.033e-1376.19Mitochondrial import receptor subunit TOM6 homolog... [more]
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Properties
Property NameValue
Genbank descriptionC18017B09Rv Drought1 Citrus clementina cDNA clone C18017B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306358 ID=CX306358; Name=CX306358; organism=Citrus clementina; type=EST; length=503bp
GCGGGAATAATAATCTTCGCTCGATACAGCAACAAAACATATTGAAGCGT
CTGATCAAAAGAGTAACACAAAGCTAGGGTTTAAGCCGAAGCAAGGATGT
TTCCGGGAATGTTCATGAAGAAGCCAGACAAGGCGGCGGCCTTGAAGCAG
CTGCGGAGCCACGTGGCCATGTTCGGGACCTGGGTCGTTGTGATTCGCGT
CACCCCCTACCTTCTTCACTATTTCTCCAGAGAAAAAGAAGAGCTCAAGC
TCGAATTCTAAATCTCTTTTTCTCTCTCTAGCAGCTGTAAGATGAAGATG
AAGAGAAAACGACGTGCTGTTTAGAAGTGTCATAATTGTTTTTAATGTAT
GCCCTGGATTTGGCAGGGGTAACATACCTGTAACTTGTTATTGAGTTTGA
AGCTTGGGTGGGTACTTTCGTAAAATGCAATAACTGGTCTATGATTATTC
TTGTTGAATTTACTTTTGGTAGCAGTATCTACTAATTAATTTCTCCATTG
TCG
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