CX306363

Overview
NameCX306363
Unique NameCX306363
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length491
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig860 contig Ccv1_Contig860:188..678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX306363 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 4.809e-25
Identity = 60/134 (44.78%), Postives = 85/134 (63.43%), Query Frame = 1
Query:   70 CPLDVIQLPSDMQNGIELTLSPYNNST-IVRESTDLNLRFSVLLSGRD-YCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCNNVGR-SFEDGVRRLVL 462
            CP  V+Q  SD+ NG  +  S  ++   +VR STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G     YK   CPSVC+SC  LC+++GR S +DG  RL L
Sbjct:   69 CPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG--YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197          
BLAST of CX306363 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 1.109e-21
Identity = 53/140 (37.86%), Postives = 80/140 (57.14%), Query Frame = 1
Query:   70 CPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCNNVGRSFEDGVRRLVLVRDDEPAF 486
            CP  V+Q   ++ +   L   P N    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+     G YK+V CP+VC SC   C +VG   +   RR + + D   AF
Sbjct:   76 CPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCG-SGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSDKPFAF 212          
BLAST of CX306363 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.402e-16
Identity = 59/161 (36.65%), Postives = 81/161 (50.31%), Query Frame = 1
Query:    1 YIVSAIWXXXXXXXXXXXXXXXY-CPLDVIQLPSDMQNGIELTLSPYNN--STIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCNNVGRSFED-GVRRLVLVRD 471
            ++VSAIW                 CPL V+Q P D  NG  +  S   N    IV ES DLN++F++ ++    CNE   WKVD +    G W +T GG  G+ G E+  + FK++K G  P  YK   CPS   + +  CNNV   F+   +RRL+L  D
Sbjct:   21 FVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAG-LPFSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTND 173          
BLAST of CX306363 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.742e-11
Identity = 50/163 (30.67%), Postives = 77/163 (47.24%), Query Frame = 1
Query:    1 YIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLS-PYNNSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCNNVGRSFEDGVRRLVLVRDDEPAF 486
            YIVSAI                 CP+ +IQ  SD+Q G+ +  S P  +   +   T+L + F      +  C E   W +      SG+  +  GG + HP  E +  +FK+EK+G+    YK+V CP   +S    C+++G ++E G R LVL   D+  F
Sbjct:   21 YIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEFVE----KPDCAESSKWVIVK---DSGEARVAIGGSEDHPQGELVRGFFKIEKLGSL--AYKLVFCP---KSSSGSCSDIGINYE-GRRSLVLKSSDDSPF 170          
The following BLAST results are available for this feature:
BLAST of CX306363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ASP_THECC4.809e-2544.7821 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU1.109e-2137.86Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA1.402e-1636.65Latex serine proteinase inhibitor OS=Carica papaya... [more]
DRTI_DELRE6.742e-1130.67Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
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Properties
Property NameValue
Genbank descriptionC18017C03Rv Drought1 Citrus clementina cDNA clone C18017C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306363 ID=CX306363; Name=CX306363; organism=Citrus clementina; type=EST; length=491bp
TACATAGTCTCAGCCATCTGGGGAGCTGGCGGTGGTGGAGTTAGCCTACA
CGGTGGCAGAAACGGATATTGTCCGCTGGACGTTATCCAGTTACCTTCTG
ATATGCAAAATGGAATCGAATTAACACTGTCACCGTATAACAATTCTACA
ATTGTCCGAGAATCCACTGATCTCAACTTGAGATTCTCAGTGTTGCTATC
TGGACGTGACTATTGTAACGAACAACCGTTGTGGAAAGTTGATAATTATG
ACGCGGCATCAGGCAAATGGTTTATAACAACCGGGGGACTTGATGGTCAC
CCTGGAGCTGAAACTTTGCTAAATTGGTTTAAGCTTGAGAAAATTGGAAA
TTTTCCAGGTATATACAAAATCGTTCATTGTCCATCCGTTTGCGAGTCTT
GTGTCAAACTCTGCAACAACGTTGGCCGTTCGTTTGAGGATGGCGTTCGA
CGTCTGGTTCTGGTTCGTGATGATGAGCCGGCATTTCCTGT
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