CX306373

Overview
NameCX306373
Unique NameCX306373
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length562
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig860 contig Ccv1_Contig860:162..723. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX306373 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.243e-23
Identity = 62/160 (38.75%), Postives = 92/160 (57.50%), Query Frame = -3
Query:   75 LKYYIVSAIWXXXXXXXXXXXXXXGYCPLDVIQLPSDMQNGIELTLSPYNNST-IVRESTDLNLRFSVLLSGRDYR-NKQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGR-SLEDGVRRLVL 545
            ++YY++S+I                 CP  V+Q  SD+ NG  +  S  ++   +VR STD+N+ F  +   RD   +   +W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G     YK   CPSVC+SC   C+++GR S +DG  RL L
Sbjct:   43 VQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVL--GYKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197          
BLAST of CX306373 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 1.519e-21
Identity = 53/140 (37.86%), Postives = 81/140 (57.86%), Query Frame = -3
Query:   51 CPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYRNKQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGRSLEDGVRRLVLVRDDEPAF 467
            CP  V+Q   ++ +   L   P N    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+     G YK+V CP+VC SC   C +VG  ++   RR + + D   AF
Sbjct:   76 CPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCG-SGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSDKPFAF 212          
BLAST of CX306373 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.246e-15
Identity = 59/168 (35.12%), Postives = 84/168 (50.00%), Query Frame = -3
Query:   66 VLSTLKYYIVSAIWXXXXXXXXXXXXXXGY-CPLDVIQLPSDMQNGIELTLSPYNN--STIVRESTDLNLRFSVLLSGRDYRNKQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGRSLED-GVRRLVLVRD 557
            VL  + Y++VSAIW                 CPL V+Q P D  NG  +  S   N    IV ES DLN++F++ ++     N+   WKVD +    G W +T GG  G+ G E+  + FK++K G  P +YK   CPS   + +  CNNV    +   +RRL+L  D
Sbjct:   14 VLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAG-LPFSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTND 173          
BLAST of CX306373 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.417e-11
Identity = 55/180 (30.56%), Postives = 80/180 (44.44%), Query Frame = -3
Query:   36 KYYIVSAIWXXXXXXXXXXXXXXGYCPLDVIQLPSDMQNGIELTLS-PYNNSTIVRESTDLNLRFSVLLSGRDYRNKQPLWKVDNYDAA-SGKWFITT---------GGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGRSLEDGVRRLVLVRDDEPAFPVVLI 542
            +YYIVSAI                 CP+ +IQ  SD+Q G+ +  S P  +   +   T+L + F                 V+  D A S KW I           GG + HP  E +  +FK+EK+G+    YK+V CP   +S    C+++G + E G R LVL   D+  F VV +
Sbjct:   19 EYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEF-----------------VEKPDCAESSKWVIVKDSGEARVAIGGSEDHPQGELVRGFFKIEKLGSL--AYKLVFCP---KSSSGSCSDIGINYE-GRRSLVLKSSDDSPFRVVFV 175          
The following BLAST results are available for this feature:
BLAST of CX306373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ASP_THECC1.243e-2338.7521 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU1.519e-2137.86Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA1.246e-1535.12Latex serine proteinase inhibitor OS=Carica papaya... [more]
DRTI_DELRE5.417e-1130.56Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
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Properties
Property NameValue
Genbank descriptionC18017D01Rv Drought1 Citrus clementina cDNA clone C18017D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306373 ID=CX306373; Name=CX306373; organism=Citrus clementina; type=EST; length=562bp
ATTGATTACACAGACGTTGATCTTTCTGTAGCGGGAATTAACACAACAGG
AAATGCCGGCTCATCATCACGAACCAGAACCAGACGTCGAACGCCATCCT
CAAGCGAACGGCCAACGTTGTTGCAGTGTTTGACACAAGACTCGCAAACG
GATGGACAATGAACGATTTTGTATGTACCTGGAAAATTTCCAATTTTCTC
AAGCTTAAACCAATTTAGCAAAGTTTCAGCTCCAGGATGACCATCAAGTC
CCCCGGTTGTTATAAACCATTTGCCTGATGCAGCGTCATAATTATCAACT
TTCCACAACGGTTGTTTGTTACGATAGTCACGTCCAGATAGCAACACTGA
GAATCTCAAGTTGAGATCAGTGGATTCTCGGACAATTGTAGAATTGTTAT
ACGGTGACAGTGTTAATTCGATTCCATTTTGCATATCAGAAGGTAATTGG
ATAACGTCCAGCGGACAATATCCGTTTCTGCCACCGTGTAGGCTAACTCC
ACCACCGCCAGCTCCCCAGATGGCTGAGACTATGTAGTACTTAAGGGTGG
ATAGGACCTTGT
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