CX306391

Overview
NameCX306391
Unique NameCX306391
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length511
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10111 contig Ccv1_Contig10111:527..1037. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX306391 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 3.496e-29
Identity = 65/146 (44.52%), Postives = 91/146 (62.33%), Query Frame = -3
Query:   75 GGGGVSLHGGRNGYCPLDVIQLPSAIQWGKKLILSPYDNST-IVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNLPGAYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVL 509
            GGGG++L       CP  V+Q  S +  G  +I S  D+   +VR STD+N+ FV +    + C+   +W++DNYD S+G+W++TT G+ G PG  TL +WFK+EK  + G YK   CPSVC+SC  LCS +GR S +DG  RL L
Sbjct:   55 GGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRD--RLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG-YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197          
BLAST of CX306391 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 1.204e-21
Identity = 58/154 (37.66%), Postives = 87/154 (56.49%), Query Frame = -3
Query:   57 GGGVSLHGGR-NG--YCPLDVIQLPSAIQWGKKLILSPYD-NSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNLPGAYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDDEP 506
            GGG+++     NG   CP  V+Q    +   + L   P +    +VR STDLN+ F   +    +     +W++D YD S+G++F+T GG+ G+PG ET+ +WFK+E+    G YK+V CP+VC SC   C  VG +  + G RRL L   D+P
Sbjct:   60 GGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPC--RWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLAL--SDKP 209          
BLAST of CX306391 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 6.186e-18
Identity = 57/151 (37.75%), Postives = 83/151 (54.97%), Query Frame = -3
Query:   66 GGGGVSLHG-GRNGYCPLDVIQLPSAIQWGKKLILSPYDN--STIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNLPGAYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRD 509
            GGGG++++G G    CPL V+Q P     G+ +I S   N    IV ES DLN++F   ++    CNE   WKVD +    G W +T GG  G+ G E+  + FK++K  LP +YK   CPS   + +  C++V  F  +  +RRL+L  D
Sbjct:   30 GGGGLTVYGPGNKKKCPLSVVQDP--FDNGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAGLPFSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTND 173          
BLAST of CX306391 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12
Identity = 55/165 (33.33%), Postives = 77/165 (46.67%), Query Frame = -3
Query:   18 GGGGVSLHGGRNGYCPLDVIQLPSAIQWGKKL-ILSPYDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNLPGAYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDDEPAFPVVLIPARERS 509
            GGGGV     R   CP+ +IQ  S +Q G  +   SP ++   +   T+L + FV        C E   W +      SG   +  GG + HP  E +  +FK+EK     AYK+V CP   +S    CS +G  ++E G R LVL   D+  F VV +  R  S
Sbjct:   30 GGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEFV----EKPDCAESSKWVIVK---DSGEARVAIGGSEDHPQGELVRGFFKIEKLG-SLAYKLVFCP---KSSSGSCSDIG-INYE-GRRSLVLKSSDDSPFRVVFVKPRSGS 181          
The following BLAST results are available for this feature:
BLAST of CX306391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ASP_THECC3.496e-2944.5221 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU1.204e-2137.66Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA6.186e-1837.75Latex serine proteinase inhibitor OS=Carica papaya... [more]
DRTI_DELRE8.652e-1233.33Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
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Properties
Property NameValue
Genbank descriptionC18017E10Rv Drought1 Citrus clementina cDNA clone C18017E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306391 ID=CX306391; Name=CX306391; organism=Citrus clementina; type=EST; length=511bp
ATTGATTACACAGACGTCGATCTTTCTCTAGCTGGAATTAACACAACAGG
AAAAGCCGGCTCATCATCACGAACCAGAACCAGACGTCGAACGCCATCCT
CAAACGAAAAGCGGCCAACGCTGCTGCAGAGTTTGACGCAAGACTCGCAA
ACAGATGGACAATGAACAATTTTGTATGCACCTGGTAGATTAGTTTTCTC
AAGCTTAAACCAATTTAGCAACGTTTCAGCTCCAGGGTGACCATCAAGTC
CCCCGGTTGTTATAAACCATCTGCCTGATGAAGCGTCATAGTTATCAACT
TTCCACAACGGTAGCTCGTTACATTGCTTACTTCCAGATAGTAACCCTAC
GAATCTCAAGTTGAGATCAGTGGATTCTCTGACAATTGTAGAATTGTCAT
ATGGTGACAGTATTAATTTCTTTCCCCATTGGATAGCAGAAGGTAATTGG
ATAACATCCAACGGACAGTATCCGTTTCTGCCTCCGTGTAGGCTAACTCC
ACCGCCGCCAG
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