CX306398
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.141e-44 Identity = 85/88 (96.59%), Postives = 85/88 (96.59%), Query Frame = -2 Query: 170 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 433 PFKPPKVAFRTKVFHPNINS GSICLDILKE WSPALTISKVL SICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 148
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 4.336e-44 Identity = 83/88 (94.32%), Postives = 85/88 (96.59%), Query Frame = -2 Query: 170 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 433 PFKPPKVAFRTKVFHPN+NS GSICLDILKE WSPALTISKVL SICSLLTDPNPDDPLVPEIAHMYKTDRAKYE+TARSWTQKYAMG Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 148
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 9.661e-44 Identity = 83/88 (94.32%), Postives = 84/88 (95.45%), Query Frame = -2 Query: 170 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 433 PFKPPKVAFRTKVFHPNINS GSICLDILKE WSPALTISKVL SICSLLTDPNPDDPLVPEIAHMYKTDRAKYE TAR+WTQKYAMG Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 3.671e-43 Identity = 82/88 (93.18%), Postives = 84/88 (95.45%), Query Frame = -2 Query: 170 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 433 PFKPPKVAFRTKVFHPNINS GSICLDILKE WSPALTISKVL SICSLLTDPNPDDPLVPEIAHMYKTD+ KYE+TARSWTQKYAMG Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYAMG 148
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 8.178e-43 Identity = 81/88 (92.05%), Postives = 84/88 (95.45%), Query Frame = -2 Query: 170 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 433 PFKPPKVAFRTKVFHPNINS GSICLDILKE WSPALTISKVL SICSLLTDPNPDDPLVPEIAHMYKTD+ KYE+TAR+WTQKYAMG Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYAMG 148
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 8.178e-43 Identity = 80/88 (90.91%), Postives = 85/88 (96.59%), Query Frame = -2 Query: 170 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 433 PFKPPKV+F+TKV+HPNINS GSICLDILKE WSPALTISKVL SICSLLTDPNPDDPLVPEIAHMYKTDR+KYE+TARSWTQKYAMG Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYAMG 148
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 2.379e-42 Identity = 79/88 (89.77%), Postives = 84/88 (95.45%), Query Frame = -2 Query: 170 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 433 PFKPPKVAFRTKV+HPNINS GSICLDILKE WSPALT+SKVL SICSLLTDPNPDDPLVPEIAH+YKTDR KYE+TA+SWTQKYAMG Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKYAMG 148
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 6.480e-40 Identity = 75/87 (86.21%), Postives = 80/87 (91.95%), Query Frame = -2 Query: 173 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 433 PFKPPKV FRTKVFHPNINS G+ICLDILK+ WSPALTISKVL SICSLLTDPNPDDPLVPEIAH+YKTD+ KYE ARSWTQKYA+ Sbjct: 61 PFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQKYAL 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.722e-38 Identity = 72/88 (81.82%), Postives = 81/88 (92.05%), Query Frame = -2 Query: 170 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 433 PFKPPKV F+TKV+HPNI+SKGSICLDILKE WSPA T SKVL SICSLLTDPNP+DPLVPEIAH+YK D++KYE+TA+ WTQKYAMG Sbjct: 62 PFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQKWTQKYAMG 149
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC1_COLGL (Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum gloeosporioides GN=UBC1 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.351e-37 Identity = 69/87 (79.31%), Postives = 80/87 (91.95%), Query Frame = -2 Query: 173 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 433 PFKPPKV F T+++HPNINS GSICLDIL++ WSPALTISKVL SICS+LTDPNPD+PLVPEIAH+YKTDRA+YE TAR WT+KYA+ Sbjct: 61 PFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDEPLVPEIAHVYKTDRARYEATAREWTRKYAI 147 The following BLAST results are available for this feature:
BLAST of CX306398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 182
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306398 ID=CX306398; Name=CX306398; organism=Citrus clementina; type=EST; length=434bpback to top |