CX306401

Overview
NameCX306401
Unique NameCX306401
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length482
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX306401 vs. ExPASy Swiss-Prot
Match: NAC7_ARATH (NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 9.415e-47
Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 2
Query:   32 ELCKIGSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHGLIGMRKTLVFYKGRAPNGQKSDWIMHEHRLETNENGTPQ 304
            ELCKIG EEQ++WYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIY RH LIGMRKTLVFYKGRAPNGQKSDWIMHE+RLET+ENGTPQ
Sbjct:   54 ELCKIGHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQ 144          
BLAST of CX306401 vs. ExPASy Swiss-Prot
Match: NAC43_ARATH (NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 1.043e-37
Identity = 70/85 (82.35%), Postives = 76/85 (89.41%), Query Frame = 2
Query:   32 ELCKIGSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHGLIGMRKTLVFYKGRAPNGQKSDWIMHEHRLETN 286
            E+CKIG+  QN+WYFFSHKDKKYPTGTRTNRAT AGFWKATGRDK IYS    IGMRKTLVFYKGRAP+GQKSDWIMHE+RL+ N
Sbjct:   63 EMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDN 147          
BLAST of CX306401 vs. ExPASy Swiss-Prot
Match: NAC66_ARATH (NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 3.356e-36
Identity = 66/83 (79.52%), Postives = 74/83 (89.16%), Query Frame = 2
Query:   32 ELCKIGSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHGLIGMRKTLVFYKGRAPNGQKSDWIMHEHRLE 280
            E+CKIG+  QN+WYF+SHKDKKYPTGTRTNRAT  GFWKATGRDK IY+    IGMRKTLVFYKGRAP+GQKSDWIMHE+RL+
Sbjct:   58 EMCKIGTTPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNGDRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLD 140          
BLAST of CX306401 vs. ExPASy Swiss-Prot
Match: NAC12_ARATH (NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.080e-34
Identity = 68/96 (70.83%), Postives = 76/96 (79.17%), Query Frame = 2
Query:   32 ELCKIGSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHGLIGMRKTLVFYKGRAPNGQKSDWIMHEHRLETNENGTPQASITS 319
            E C+IGS  QN+WYFFSHKDKKYPTGTRTNRAT AGFWKATGRDK I S    IG+RKTLVFYKGRAP+GQKSDWIMHE+RL+        A + +
Sbjct:   63 EECRIGSTPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSCVRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLDDTPMSNGYADVVT 158          
BLAST of CX306401 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 3.473e-33
Identity = 64/82 (78.05%), Postives = 73/82 (89.02%), Query Frame = 2
Query:   38 CKIGSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHGL-IGMRKTLVFYKGRAPNGQKSDWIMHEHRLE 280
            C+IG+  QNEWYFFSHKDKKYPTGTRTNRAT AGFWKATGRDKAI+  +   IGMRKTLVFY GRAP+G+K+DWIMHE+RL+
Sbjct:   59 CRIGTGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAPHGKKTDWIMHEYRLD 140          
BLAST of CX306401 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.719e-27
Identity = 52/76 (68.42%), Postives = 66/76 (86.84%), Query Frame = 2
Query:   59 QNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRH--GLIGMRKTLVFYKGRAPNGQKSDWIMHEHRLE 280
            + EWYFFS +D+KYPTG RTNRAT+AG+WKATG+D+ I+S     L+GM+KTLVFYKGRAP G+KS+W+MHE+RLE
Sbjct:   70 EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRLE 145          
BLAST of CX306401 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 4.858e-27
Identity = 54/89 (60.67%), Postives = 71/89 (79.78%), Query Frame = 2
Query:   32 ELCKIGSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHG--LIGMRKTLVFYKGRAPNGQKSDWIMHEHRLETNEN 292
            E+ K+G   + EWYF+S +D+KYPTG RTNRAT AG+WKATG+DK ++S  G  L+GM+KTLVFYKGRAP G K+ W+MHE+RLE + +
Sbjct:   69 EMAKMG---EREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLENDHS 154          
BLAST of CX306401 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.041e-25
Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 2
Query:   32 ELCKIGSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYS--RHGLIGMRKTLVFYKGRAPNGQKSDWIMHEHRLE 280
            E  K+G   + EWYFF+ +D+KYPTG RTNRAT+AG+WKATG+D+ I S     L+GM+KTLVFYKGRAP G+KS W+MHE+RL+
Sbjct:   67 EKAKMG---EKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRLD 148          
BLAST of CX306401 vs. ExPASy Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 3.481e-25
Identity = 49/85 (57.65%), Postives = 67/85 (78.82%), Query Frame = 2
Query:   65 EWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHGLIGMRKTLVFYKGRAPNGQKSDWIMHEHRLETNENGTPQASITS 319
            +WYF+S +D+KY TG RTNRAT  G+WKATG+D+ I  +  L+GMRKTLVFY+GRAP G+K+DW+MHE RL+ + +  P  S++S
Sbjct:   75 DWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRKGKLVGMRKTLVFYQGRAPRGRKTDWVMHEFRLQGSHH-PPNHSLSS 158          
BLAST of CX306401 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 7.755e-25
Identity = 53/92 (57.61%), Postives = 64/92 (69.57%), Query Frame = 2
Query:   59 QNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIY--------SRHG--------LIGMRKTLVFYKGRAPNGQKSDWIMHEHRLETN 286
            + EWYFFSHKD KYPTG RTNRATK G+WKATG+D+ I+        S +G        L+GM+KTLVFY GRAP G K++W+MHE RL  N
Sbjct:   72 EKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRLHAN 163          
The following BLAST results are available for this feature:
BLAST of CX306401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
NAC7_ARATH9.415e-4792.31NAC domain-containing protein 7 OS=Arabidopsis tha... [more]
NAC43_ARATH1.043e-3782.35NAC domain-containing protein 43 OS=Arabidopsis th... [more]
NAC66_ARATH3.356e-3679.52NAC domain-containing protein 66 OS=Arabidopsis th... [more]
NAC12_ARATH1.080e-3470.83NAC domain-containing protein 12 OS=Arabidopsis th... [more]
NAC76_ORYSJ3.473e-3378.05NAC domain-containing protein 76 OS=Oryza sativa s... [more]
NAC98_ARATH3.719e-2768.42Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NAC31_ARATH4.858e-2760.67Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]
NAC54_ARATH2.041e-2562.35Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC22_ARATH3.481e-2557.65NAC domain-containing protein 21/22 OS=Arabidopsis... [more]
NAC77_ORYSJ7.755e-2557.61NAC domain-containing protein 77 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionC18017F08Rv Drought1 Citrus clementina cDNA clone C18017F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306401 ID=CX306401; Name=CX306401; organism=Citrus clementina; type=EST; length=482bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAGAATTGTGCAAAATAGGAA
GTGAAGAGCAGAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAATAT
CCAACTGGAACTCGCACGAATAGAGCAACAAAAGCAGGATTTTGGAAAGC
CACAGGAAGAGACAAGGCCATTTACTCCAGGCATGGCCTTATTGGCATGA
GAAAAACCTTAGTGTTTTACAAAGGACGAGCTCCCAATGGACAAAAATCA
GATTGGATCATGCATGAACATCGTCTTGAAACTAATGAAAATGGCACTCC
TCAGGCAAGTATCACTTCTCTTCTTAATAAGATGAAATTTTTATTTACTT
TTAATTGCTACTGCTTTACCAAATGAAGAAACCATCTTTTTTTTTTTGCA
AGAATTGGTTCAAAAAATAAATTAGATAAAAATATCAAAACAATTTGCAT
ATTCAATAGGGAAAGCATTTAGTGAGACTCCC
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