CX306407

Overview
NameCX306407
Unique NameCX306407
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length524
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1030 contig Ccv1_Contig1030:411..934. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX306407 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.131e-18
Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 3
Query:    6 WKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCNNVGR-SFEDGVRRLVL 236
            W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G     YK   CPSVC+SC  LC+++GR S +DG  RL L
Sbjct:  122 WRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG--YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197          
BLAST of CX306407 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 2.384e-15
Identity = 36/85 (42.35%), Postives = 55/85 (64.71%), Query Frame = 3
Query:    6 WKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCNNVGRSFEDGVRRLVLVRDDEPAF 260
            W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+     G YK+V CP+VC SC   C +VG   +   RR + + D   AF
Sbjct:  129 WRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCG-SGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSDKPFAF 212          
The following BLAST results are available for this feature:
BLAST of CX306407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC5.131e-1852.5621 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU2.384e-1542.35Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionC18017G02Rv Drought1 Citrus clementina cDNA clone C18017G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306407 ID=CX306407; Name=CX306407; organism=Citrus clementina; type=EST; length=524bp
GCGGGTGGAAAGTTGATAATTATGACGCGGCATCAGGCAAATGGTTTATA
ACAACCGGGGGACTTGATGGTCACCCTGGAGCTGAAACTTTGCTAAATTG
GTTTAAGCTTGAGAAAATTGGAAATTTTCCAGGTATATACAAAATCGTTC
ATTGTCCATCCGTTTGCGAGTCTTGTGTCAAACTCTGCAACAACGTTGGC
CGTTCGTTTGAGGATGGCGTTCGACGTCTGGTTCTGGTTCGTGATGATGA
GCCGGCATTTCCTGTTGTGTTAATTCCCGCTACAGAAAGATCAACGTCTG
TGTAATCAATGTACCCTAACCAGCTAGCGGTATTATTATTCTAAATAACG
GACCAGGCTAGCTGCTCTTTAATCTCTAGGATTAAAATTATGAATAAGAA
ACCCTGTGATCCTTTCGGGGTTAATAAATTCTACTGTTGGTGTATACCTT
AAAATGTAATTTCTTGTTGAACATGAAAATCGAAATCAAGCGTTCTTTGT
TCTAAAAAAAAAAAAAAAAAAAAA
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