CX306412

Overview
NameCX306412
Unique NameCX306412
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length268
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig860 contig Ccv1_Contig860:458..722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX306412 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.058e-12
Identity = 34/63 (53.97%), Postives = 40/63 (63.49%), Query Frame = 1
Query:    7 TTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVL 195
            TT G+ G PG  TL +WFK+EK G     YK   CPSVC+SC  LCS +GR S +DG  RL L
Sbjct:  137 TTDGVKGEPGPNTLCSWFKIEKAGVLG--YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197          
The following BLAST results are available for this feature:
BLAST of CX306412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ASP_THECC3.058e-1253.9721 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
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Properties
Property NameValue
Genbank descriptionC18017G07Rv Drought1 Citrus clementina cDNA clone C18017G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306412 ID=CX306412; Name=CX306412; organism=Citrus clementina; type=EST; length=268bp
GCGGGAACAACCGGGGGACTTGATGGTCACCCTGGAGCTGAAACTTTGCT
AAATTGGTTTAAGCTTGAGAAAATTGGAAATTTTCCAGGTATATACAAAA
TCGTTCATTGTCCATCCGTTTGCGAGTCTTGCGTCAAACTCTGCAGCAGC
GTTGGCCGCTTTTCGTTTGAGGATGGCGTTCGACGTCTGGTTCTGGTTCG
TGATGATGAGCCGGCTTTTCCTGTTGTGTTAATTCCAGCTAGAGAAAGAT
CGACGTCTGTGTAATCAA
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