CX306419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_ARATH (Coproporphyrinogen-III oxidase, chloroplastic OS=Arabidopsis thaliana GN=CPX PE=1 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 2.592e-90 Identity = 150/184 (81.52%), Postives = 157/184 (85.33%), Query Frame = 3 Query: 6 VVYGVMPPEXXXXXXXXXSDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 VVYGVMPPE SD+KPGP+PFFAAG+SSVLHPKNPFAPTLHFNYRYFETDAPKD PGAPRQWWFGGGTD TPAYIFEEDVKHFHS QK A DKFDP+FYPRFKKWCDDYFYIKH FFDDLNDYDQEMLLSFATECANSV+ AYIPI+EKRKD FT+QHKAWQQLRRG Sbjct: 141 VVYGVMPPEAYRAAKGSASDQKPGPVPFFAAGVSSVLHPKNPFAPTLHFNYRYFETDAPKDVPGAPRQWWFGGGTDFTPAYIFEEDVKHFHSIQKQACDKFDPSFYPRFKKWCDDYFYIKHRDERRGLGGIFFDDLNDYDQEMLLSFATECANSVVPAYIPIVEKRKDMEFTEQHKAWQQLRRG 324
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SOYBN (Coproporphyrinogen-III oxidase, chloroplastic OS=Glycine max GN=CPX PE=2 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 1.680e-89 Identity = 150/184 (81.52%), Postives = 156/184 (84.78%), Query Frame = 3 Query: 6 VVYGVMPPEXXXXXXXXXSDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 VVYGVMPP+ +D+KPGP+PFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD PGAPRQWWFGGGTDLTPAYIFEEDVKHFHS QK A DKF+PTFYPRFKKWCDDYFYIKH FFDDLNDYDQEMLLSFATECANSVI AY+PIIEKRKD PF D KAWQQLRRG Sbjct: 140 VVYGVMPPDAYRAAKGVPTDQKPGPVPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSIQKQACDKFEPTFYPRFKKWCDDYFYIKHRGERRGLGGIFFDDLNDYDQEMLLSFATECANSVIPAYLPIIEKRKDLPFNDHQKAWQQLRRG 323
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_TOBAC (Coproporphyrinogen-III oxidase, chloroplastic OS=Nicotiana tabacum GN=CPX PE=2 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 7.804e-87 Identity = 148/185 (80.00%), Postives = 155/185 (83.78%), Query Frame = 3 Query: 6 VVYGVMPPEXXXXXXXXXSDE-KPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 VVYGVMPPE + KPGPIPFFAAG+SSVLHPKNPFAPTLHFNYRYFETDAPKD PGAPRQWWFGGGTD TPAYIFEEDVKHFHS QK+A DKFD +FYPRFKKWC DYFYIKH FFDD NDYDQEMLLSF+TECANSVI AYIPI+EKRKDTPFTD+HKAWQQLRRG Sbjct: 151 VVYGVMPPEAYRAARPTDNGNVKPGPIPFFAAGVSSVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDFTPAYIFEEDVKHFHSVQKAACDKFDASFYPRFKKWCVDYFYIKHRDERRGLGGIFFDDFNDYDQEMLLSFSTECANSVIPAYIPIVEKRKDTPFTDKHKAWQQLRRG 335
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_ORYSJ (Coproporphyrinogen-III oxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=CPX PE=2 SV=2) HSP 1 Score: 313.923 bits (803), Expect = 3.279e-85 Identity = 145/191 (75.92%), Postives = 155/191 (81.15%), Query Frame = 3 Query: 6 VVYGVMPPEXXXXXXXXXSDE-------KPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 VVYGVMPP+ K GP+PFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD PGAPRQWWFGGGTDLTP+YI EEDVKHFHS QK A DKFDP+FYPRFKKWCDDYFYIKH FFDDLNDYDQEMLL+FATECA+SV+ AYIPIIE+RKDTPFT++HKAWQQLRRG Sbjct: 145 VVYGVMPPDAYRAAKGEAGKNGAAADGPKAGPVPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDLTPSYIIEEDVKHFHSVQKQACDKFDPSFYPRFKKWCDDYFYIKHRNERRGLGGIFFDDLNDYDQEMLLNFATECADSVVPAYIPIIERRKDTPFTEEHKAWQQLRRG 335
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_HORVU (Coproporphyrinogen-III oxidase, chloroplastic OS=Hordeum vulgare GN=CPX PE=2 SV=1) HSP 1 Score: 294.278 bits (752), Expect = 2.689e-79 Identity = 130/163 (79.75%), Postives = 141/163 (86.50%), Query Frame = 3 Query: 69 KPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 K GP+PFF+AGISSVLHPKNPFAPTLHFNYRYFETDAPKD PGAPR WWFGGGTDLTP+Y+ EEDVKHFHS QK DKFDP+FYPRFKKWCDDYFYIKH FFDDLNDYDQ+MLL+FATECA SVI AYIPIIE+RKDTPF ++ KAWQQ+RRG Sbjct: 167 KAGPVPFFSAGISSVLHPKNPFAPTLHFNYRYFETDAPKDVPGAPRSWWFGGGTDLTPSYLIEEDVKHFHSVQKQTCDKFDPSFYPRFKKWCDDYFYIKHRNERRGLGGIFFDDLNDYDQDMLLNFATECAGSVIPAYIPIIERRKDTPFNEEQKAWQQVRRG 329
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_DROME (Coproporphyrinogen-III oxidase OS=Drosophila melanogaster GN=Coprox PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.065e-51 Identity = 91/185 (49.19%), Postives = 120/185 (64.86%), Query Frame = 3 Query: 6 VVYGVMPPEXXXXXXXXXSDEKPGP-IPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 VV G +PP + K G +PFFA+G+S+V+HP+NP PT+HFNYRYFE + K +QWWFGGGTDLTP Y+ E+D HFH T KSA D+ DPT+YPRFKKWCDDYF IKH FFDD++ +QE +F + CA +VI +Y+P++ K K+ + + + WQ LRRG Sbjct: 147 VVTGSLPPAAVQQMRARGKNLKEGASLPFFASGVSAVIHPRNPHVPTIHFNYRYFEVETAK----GEKQWWFGGGTDLTPYYLCEKDASHFHQTLKSACDEHDPTYYPRFKKWCDDYFRIKHRNESRGIGGIFFDDIDSPNQEAAFNFVSSCARAVIPSYVPLVRKHKNREYGNNERQWQLLRRG 327
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_HUMAN (Coproporphyrinogen-III oxidase, mitochondrial OS=Homo sapiens GN=CPOX PE=1 SV=3) HSP 1 Score: 192.971 bits (489), Expect = 8.435e-49 Identity = 86/163 (52.76%), Postives = 106/163 (65.03%), Query Frame = 3 Query: 69 KPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 K G +PF A G+SSV+HPKNP APT+HFNYRYFE + +QWWFGGG DLTP Y+ +ED HFH T K A D+ P YP+FKKWCDDYF+I H FFDDL+ +E + F CA +V+ +YIP+++K D FT Q K WQQLRRG Sbjct: 232 KDGKLPFCAMGVSSVIHPKNPHAPTIHFNYRYFEVEEADGN----KQWWFGGGCDLTPTYLNQEDAVHFHRTLKEACDQHGPDLYPKFKKWCDDYFFIAHRGERRGIGGIFFDDLDSPSKEEVFRFVQSCARAVVPSYIPLVKKHCDDSFTPQEKLWQQLRRG 390
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SCHPO (Probable coproporphyrinogen-III oxidase OS=Schizosaccharomyces pombe GN=hem13 PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 4.186e-48 Identity = 87/165 (52.73%), Postives = 109/165 (66.06%), Query Frame = 3 Query: 63 DEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 D +PFFAAGIS V+HP+NP APT H NYRYFE + WWFGGG DLTP+ +FEED KHFH K A D+ DPTFYPRFKKW D+YF IKH FFDDL++ D + L +F +CA++ + AY+PI+EKRK+ FT+ K +Q +RRG Sbjct: 90 DRTAKELPFFAAGISMVIHPRNPMAPTTHLNYRYFELV----NSDGKKIWWFGGGADLTPSILFEEDGKHFHKLHKEACDRHDPTFYPRFKKWADEYFLIKHRKETRGIGGIFFDDLSEKDPQELFAFVKDCAHTFLPAYVPIMEKRKNMEFTEDDKEFQLIRRG 250
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_RAT (Coproporphyrinogen-III oxidase, mitochondrial OS=Rattus norvegicus GN=Cpox PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.218e-47 Identity = 85/164 (51.83%), Postives = 104/164 (63.41%), Query Frame = 3 Query: 66 EKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 +K G +PF A GISSV+HPKNP+APT+HFNYRYFE + WWFGGG DLTP Y+ ED HFH T K A D+ P YP+FKKWCDDYF+I H FFDDL+ +E F CA +V+ +Y+PI++K D +T Q K WQQLRRG Sbjct: 220 KKDGKLPFTAMGISSVIHPKNPYAPTMHFNYRYFEVEEAD----GKMHWWFGGGCDLTPTYLNREDAVHFHRTLKEACDQHGPDIYPKFKKWCDDYFFIAHRGERRGIGGIFFDDLDSPSKEEAFRFVKTCAEAVVPSYVPIVKKHCDDSYTPQDKLWQQLRRG 379
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_MOUSE (Coproporphyrinogen-III oxidase, mitochondrial OS=Mus musculus GN=Cpox PE=1 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 2.297e-46 Identity = 82/163 (50.31%), Postives = 103/163 (63.19%), Query Frame = 3 Query: 69 KPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 K +PF A G+SSV+HPKNP+APT+HFNYRYFE + WWFGGG DLTP Y+ +ED HFH T K A D+ P YP+FKKWCDDYF+I H FFDDL+ +E F CA +V+ +Y+PI++K D +T + K WQQLRRG Sbjct: 221 KDSKLPFTAMGVSSVIHPKNPYAPTMHFNYRYFEVEEADGNT----HWWFGGGCDLTPTYLNQEDAVHFHRTLKEACDQHGPDIYPKFKKWCDDYFFIVHRGERRGIGGIFFDDLDSPSKEEAFRFVKTCAEAVVPSYVPIVKKHCDDSYTPRDKLWQQLRRG 379 The following BLAST results are available for this feature:
BLAST of CX306419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306419 ID=CX306419; Name=CX306419; organism=Citrus clementina; type=EST; length=558bpback to top |