CX308509

Overview
NameCX308509
Unique NameCX308509
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX308509 vs. ExPASy Swiss-Prot
Match: BAMT_ANTMA (Benzoate carboxyl methyltransferase OS=Antirrhinum majus GN=BAMT PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.822e-56
Identity = 109/202 (53.96%), Postives = 140/202 (69.31%), Query Frame = 3
Query:    3 LPEFQVFLNDLPGNDFNSIFESLPDFYKRIKKDKFGPCFIAGMPGSFYERLFQSRSINFIHSSYSVHWLSKVPENLETNKR-NIYITKSSPPSVCQAFLEQFQRDFSAFLSLRSEEIVSGGRMFLTFIGRSIADPSSKDCCRLWELLTKALIQLVNEGLVEEADVDSFNLPCYFPYKEEVKSIVREQGSFILDTFESFEVNW 605
            LPEF+VFLNDLP NDFN++F+ L          + G CF+ G+PGSFY RL   +S++F +SSYS+HWLS+VPE LE N R NIY+   SPP V +A+ +Q++RDFS FL LR EEIV GGRM LTF GRS+ DPSSKD   ++ LL K L+ +V EGLV+  D+ SFN+P Y P   EV++ +  +GSF LD  E F V W
Sbjct:   92 LPEFEVFLNDLPDNDFNNLFKLL--------SHENGNCFVYGLPGSFYGRLLPKKSLHFAYSSYSIHWLSQVPEGLEDNNRQNIYMATESPPEVYKAYAKQYERDFSTFLKLRGEEIVPGGRMVLTFNGRSVEDPSSKDDLAIFTLLAKTLVDMVAEGLVKMDDLYSFNIPIYSPCTREVEAAILSEGSFTLDRLEVFRVCW 285          
BLAST of CX308509 vs. ExPASy Swiss-Prot
Match: JMT_BRARP (Jasmonate O-methyltransferase OS=Brassica rapa subsp. pekinensis GN=JMT PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.359e-53
Identity = 106/226 (46.90%), Postives = 145/226 (64.16%), Query Frame = 3
Query:    3 LPEFQVFLNDLPGNDFNSIFESLPDFYKRIKK------------DKFGPCFIAGMPGSFYERLFQSRSINFIHSSYSVHWLSKVPENLETNKRN-------------IYITKSSPPSVCQAFLEQFQRDFSAFLSLRSEEIVSGGRMFLTFIGRSIADPSSKDCCRLWELLTKALIQLVNEGLVEEADVDSFNLPCYFPYKEEVKSIVREQGSFILDTFESFEVNW 605
            +PE  + LNDLP NDFN IF SLP+FY R+KK               GPCF++ +PGSFY RLF  RS++F+HSS S+HWLS+VP   E NK++             IY++K+SP S  + +  QFQ DFS FL  RSEE+V GGRM L+F+GRS  DP++++ C  WELL +AL+ L  EG++EE ++D+FN P Y    EE+K  + ++GSF +D  E   V+W
Sbjct:   88 VPELSLSLNDLPSNDFNYIFASLPEFYDRVKKRDNNYESLGFEHGSGGPCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCG-EVNKKDGVVITADLDNRGKIYLSKTSPKSAHKVYALQFQTDFSVFLRSRSEELVPGGRMVLSFLGRSSPDPTTEESCYQWELLAQALMSLAKEGIIEEENIDAFNAPYYAASPEELKMAIEKEGSFSIDRLEISPVDW 312          
BLAST of CX308509 vs. ExPASy Swiss-Prot
Match: JMT_ARATH (Jasmonate O-methyltransferase OS=Arabidopsis thaliana GN=JMT PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 2.170e-51
Identity = 102/222 (45.95%), Postives = 142/222 (63.96%), Query Frame = 3
Query:    3 LPEFQVFLNDLPGNDFNSIFESLPDFYKRIKKDKFG---------PCFIAGMPGSFYERLFQSRSINFIHSSYSVHWLSKVP------------ENLETNKRNIYITKSSPPSVCQAFLEQFQRDFSAFLSLRSEEIVSGGRMFLTFIGRSIADPSSKDCCRLWELLTKALIQLVNEGLVEEADVDSFNLPCYFPYKEEVKSIVREQGSFILDTFESFEVNW 605
            +PE +V LNDLP NDFN I  SLP+FY R+  +K G          CF++ +PGSFY RLF  RS++F+HSS S+HWLS+VP             +LE N   IYI+K+SP S  +A+  QFQ DF  FL  RSEE+V GGRM L+F+GR   DP++++ C  WELL +AL+ +  EG++EE  +D+FN P Y    EE+K ++ ++GSF +D  E   ++W
Sbjct:   88 VPELRVSLNDLPSNDFNYICASLPEFYDRVNNNKEGLGFGRGGGESCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCREAEKEDRTITADLE-NMGKIYISKTSPKSAHKAYALQFQTDFLVFLRSRSEELVPGGRMVLSFLGRRSLDPTTEESCYQWELLAQALMSMAKEGIIEEEKIDAFNAPYYAASSEELKMVIEKEGSFSIDRLEISPIDW 308          
BLAST of CX308509 vs. ExPASy Swiss-Prot
Match: MT810_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g38100 OS=Arabidopsis thaliana GN=At5g38100 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.358e-27
Identity = 72/204 (35.29%), Postives = 105/204 (51.47%), Query Frame = 3
Query:    9 EFQVFLNDLPGNDFNSIFESLPDFYKRIKKDKFGPCFIAGMPGSFYERLFQSRSINFIHSSYSVHWLSKVPENLETNK-----RNIYITKSSPPSVCQAFLEQFQRDFSAFLSLRSEEIVSGGRMFLTFIGRSIADPSSKDCCRLW-----ELLTKALIQLVNEGLVEEADVDSFNLPCYFPYKEEVKSIVREQGSFILDTFES 590
            EFQVF ND P NDFN++F + P   +R         F  G+PGSFY R+    SI+  H+SY+ HWLSKVP+N+   K     +N     +    V +A+  QF +D   FL  R+EE+V GG M +  IG  +  P        W     + +   L+ +   G+  E  +D F+LP YFP   E+K  + + GSF ++  E+
Sbjct:   97 EFQVFFNDQPTNDFNTLFRTQPLSPER-------EYFSVGVPGSFYGRVLPRNSIHIGHTSYTTHWLSKVPDNVCDKKSMAWNKNYIQCNNLLEEVTKAYKVQFIKDMEIFLDARAEELVPGGLMIV--IGECL--PDGVSLYETWQGYVMDTIGDCLMDMAKSGITSEEKIDLFSLPVYFPQFSELKGEIEKNGSFTIELMET 289          
BLAST of CX308509 vs. ExPASy Swiss-Prot
Match: MT797_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g37970 OS=Arabidopsis thaliana GN=At5g37970 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.489e-25
Identity = 68/204 (33.33%), Postives = 113/204 (55.39%), Query Frame = 3
Query:    9 EFQVFLNDLPGNDFNSIFESLPDFYKRIKKDKFGPCFIAGMPGSFYERLFQSRSINFIHSSYSVHWLSKVPENLETNKRNIYITKS------SPPSVCQAFLEQFQRDFSAFLSLRSEEIVSGGRMFLTFIGRSIADPSSKDCCRLW-----ELLTKALIQLVNEGLVEEADVDSFNLPCYFPYKEEVKSIVREQGSFILDTFE 587
            EFQV  ND P NDFN++F + P F ++         F  G+PGSF+ R+    S++  H+SY++HWLS VP+++  +K++  + KS          V +A+  QF++DF  FL  R+EE+VSGG M L+  G+ + D   K     W     +++   L+ L   G+  +  ++ F+LP Y P+  E K+ + +  +F ++T E
Sbjct:  100 EFQVCFNDQPNNDFNTLFRTQPFFSRK-------EYFSVGVPGSFHGRVLPKNSLHIGHTSYTLHWLSNVPQHV-CDKKSPALNKSYIQCNNLVDEVTKAYKIQFRKDFGGFLEARAEELVSGGLMILS--GQCLPDGIPK--ALTWQGVVIDMIGDCLMDLAKLGITSKEKIELFSLPTYIPHISEFKANIEQNENFNVETME 291          
BLAST of CX308509 vs. ExPASy Swiss-Prot
Match: MT878_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g38780 OS=Arabidopsis thaliana GN=At5g38780 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.015e-24
Identity = 70/204 (34.31%), Postives = 104/204 (50.98%), Query Frame = 3
Query:    9 EFQVFLNDLPGNDFNSIFESLPDFYKRIKKDKFGPCFIAGMPGSFYERLFQSRSINFIHSSYSVHWLSKVPE------NLETNKRNIYITKSSPPSVCQAFLEQFQRDFSAFLSLRSEEIVSGGRMFLTFIGRSIADPSSKDCCRLWELLTK-----ALIQLVNEGLVEEADVDSFNLPCYFPYKEEVKSIVREQGSFILDTFE 587
            EFQV+ NDLP NDFN++F + P   K+         F  G+PGSFY R+    SI+  ++S++ HWLSKVPE      +L  NK  I+   +    V +A+  QF++D   FL  R+EE+V GG M    +G+ +  P        W  + K      L  +   G+  E  ++ FNLP YFP   E+K  + +   F ++  E
Sbjct:   99 EFQVYFNDLPNNDFNTLFRTQPPSSKQ-------EYFSVGVPGSFYGRVLPRNSIHIGNTSFTTHWLSKVPEEVCDKNSLAWNKNYIH-CNNLIEEVTEAYKVQFEKDMGVFLKARAEELVPGGLMIT--LGQCL--PDGVAMYETWSGIVKDTIGDCLQDMATLGVTTEEKIEMFNLPVYFPQVSELKGAIEQNIRFTIEMME 290          
BLAST of CX308509 vs. ExPASy Swiss-Prot
Match: MT799_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g37990 OS=Arabidopsis thaliana GN=At5g37990 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.621e-22
Identity = 64/204 (31.37%), Postives = 109/204 (53.43%), Query Frame = 3
Query:    9 EFQVFLNDLPGNDFNSIFESLPDFYKRIKKDKFGPCFIAGMPGSFYERLFQSRSINFIHSSYSVHWLSKVPENLETNKRNIYITKS------SPPSVCQAFLEQFQRDFSAFLSLRSEEIVSGGRMFLTFIGRSIADPSSKDCCRLW-----ELLTKALIQLVNEGLVEEADVDSFNLPCYFPYKEEVKSIVREQGSFILDTFE 587
            EFQV  ND P NDFN++F + P   K+            G+PGSF+ R+    S++  H +Y++HWLS VP+++  +K++  + KS          V +A+  QF++D   FL  R+EE+VSGG M L+  G+ + D   K     W     +++   L+ +  +G+  +  ++ F+LP Y P+  E K+ +    +F ++T E
Sbjct:  100 EFQVCFNDQPNNDFNTLFRTQPISSKQAYLS-------VGVPGSFHGRVLPKNSLHIGHITYALHWLSTVPQHV-CDKKSPALNKSYIQCNNLVEEVTEAYRVQFKKDMGDFLGARAEELVSGGLMILS--GQCLPDGVPK--ALTWQGVVIDMIGDCLMDMAKQGITTKEKIELFSLPIYIPHISEFKAEIERNENFSIETME 291          
The following BLAST results are available for this feature:
BLAST of CX308509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
BAMT_ANTMA3.822e-5653.96Benzoate carboxyl methyltransferase OS=Antirrhinum... [more]
JMT_BRARP1.359e-5346.90Jasmonate O-methyltransferase OS=Brassica rapa sub... [more]
JMT_ARATH2.170e-5145.95Jasmonate O-methyltransferase OS=Arabidopsis thali... [more]
MT810_ARATH6.358e-2735.29Probable S-adenosylmethionine-dependent methyltran... [more]
MT797_ARATH3.489e-2533.33Probable S-adenosylmethionine-dependent methyltran... [more]
MT878_ARATH1.015e-2434.31Probable S-adenosylmethionine-dependent methyltran... [more]
MT799_ARATH1.621e-2231.37Probable S-adenosylmethionine-dependent methyltran... [more]
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Properties
Property NameValue
Genbank descriptionC20010G06SK OF2 Citrus clementina cDNA clone C20010G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308509 ID=CX308509; Name=CX308509; organism=Citrus clementina; type=EST; length=606bp
AATTACCCGAGTTTCAAGTGTTTCTCAATGATCTCCCAGGAAATGACTTC
AACAGCATCTTCGAGTCTCTTCCTGATTTTTATAAAAGGATCAAAAAGGA
CAAATTTGGACCTTGTTTCATAGCAGGAATGCCAGGTTCCTTTTACGAGA
GGCTTTTTCAAAGCAGGAGCATAAATTTCATACATTCTTCTTACAGTGTT
CACTGGCTCTCCAAGGTTCCAGAGAATCTTGAGACTAACAAGAGGAATAT
TTACATTACTAAGTCGAGCCCTCCCAGTGTCTGTCAAGCTTTTTTGGAGC
AGTTCCAACGTGATTTCTCAGCATTTTTAAGCTTACGCTCTGAAGAAATT
GTTTCTGGAGGACGTATGTTTCTCACTTTTATTGGCAGGAGCATCGCAGA
TCCCTCGAGCAAAGATTGCTGTCGCCTTTGGGAGCTGCTAACAAAAGCTC
TCATTCAACTGGTCAATGAGGGTCTTGTTGAAGAGGCTGACGTGGATTCA
TTCAATCTGCCTTGCTATTTTCCCTACAAGGAAGAAGTCAAGTCAATTGT
CAGGGAGCAAGGTTCATTCATTCTCGACACGTTCGAAAGTTTTGAGGTGA
ATTGGG
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