CX308511
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308511 vs. ExPASy Swiss-Prot
Match: DHX57_HUMAN (Putative ATP-dependent RNA helicase DHX57 OS=Homo sapiens GN=DHX57 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 4.288e-14 Identity = 51/159 (32.08%), Postives = 78/159 (49.06%), Query Frame = 1 Query: 46 SDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKEDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVA---ATEQGVAGAALSNLRKSANSTAKAHPLWYDGRREVHIHPSSINSQLK 513 SD+L L+ AYK WQ + K G +A+ +C + FLS V+ + ++ QF LL+DIG + + K+ + D + N A + ++ A+LCA LYPNV + E + +R S DG VHIHPSS+N Q++ Sbjct: 1119 SDYLALLQAYKGWQ-LSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSAELKFVTKNDG--YVHIHPSSVNYQVR 1274
BLAST of CX308511 vs. ExPASy Swiss-Prot
Match: DHX57_MOUSE (Putative ATP-dependent RNA helicase DHX57 OS=Mus musculus GN=Dhx57 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 1.248e-13 Identity = 51/159 (32.08%), Postives = 78/159 (49.06%), Query Frame = 1 Query: 46 SDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKEDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNV--AATEQGVAGAALSN-LRKSANSTAKAHPLWYDGRREVHIHPSSINSQLK 513 SD+L L+ AYK WQ + K +A+ +C + FLS + + ++ QF LL+DIG + + + K+ + D + N A + ++ A+LCA LYPNV T +G S +R S DG VHIHPSS+N Q++ Sbjct: 1121 SDYLALLCAYKGWQ-LSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGFVKEGLRAKEIEKRAQGGDGVLDATGEEANTNAENPKLISAVLCAALYPNVVQVKTPEGKFQKTSSGVVRLQPKSAELKFVTKNDG--YVHIHPSSVNYQVR 1276
BLAST of CX308511 vs. ExPASy Swiss-Prot
Match: DHX36_MOUSE (Probable ATP-dependent RNA helicase DHX36 OS=Mus musculus GN=Dhx36 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.437e-11 Identity = 46/154 (29.87%), Postives = 74/154 (48.05%), Query Frame = 1 Query: 40 TQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKEDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSANSTAKAHPLWYDGRREVHIHPSSIN 501 T+SDHL ++ A++ W++ +RG + + +C +YFLSS+ + M+ +M+ QF L G + S S + N+ +++ I+KA++CAGLYP VA L RK K+ L V IHP S+N Sbjct: 745 TRSDHLTVVNAFEGWEEAK-RRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFV-----------------SSRSPKDPKANINSDNEKIIKAVICAGLYPKVAKIRLN-----LGKKRKMVKVHTKSDGL-------VSIHPKSVN 868
BLAST of CX308511 vs. ExPASy Swiss-Prot
Match: DHX36_HUMAN (Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.437e-11 Identity = 45/154 (29.22%), Postives = 76/154 (49.35%), Query Frame = 1 Query: 40 TQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKEDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSANSTAKAHPLWYDGRREVHIHPSSIN 501 T+SDHL ++ A++ W++ +RG + + +C +YFLSS+ + M+ +M+ QF L G ++ + +D +S N+ +++ I+KA++CAGLYP VA L RK K L V +HP S+N Sbjct: 752 TRSDHLTVVNAFEGWEEAR-RRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVS--------SRNPKDPES---------NINSDNEKIIKAVICAGLYPKVAKIRLN-----LGKKRKMVKVYTKTDGL-------VAVHPKSVN 875 The following BLAST results are available for this feature:
BLAST of CX308511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308511 ID=CX308511; Name=CX308511; organism=Citrus clementina; type=EST; length=514bpback to top |