CX308514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: ALIS5_ARATH (ALA-interacting subunit 5 OS=Arabidopsis thaliana GN=ALIS5 PE=1 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 2.226e-60 Identity = 106/157 (67.52%), Postives = 125/157 (79.62%), Query Frame = 2 Query: 95 YSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSTASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPNGKPIVPCGLIAWSLFNDTYT 565 YS+FTQQELPACKPILTP+WVILTFLV G+ F+P+G+ L AS+ VVEIVDRY+TDCIP ++R + VA+IQ K C R ITVTK MK PVYVYYQL+NFYQNHRRYVKSRND QL+ + + C PED G+PIVPCGL+AWSLFNDTY+ Sbjct: 30 YSRFTQQELPACKPILTPRWVILTFLVAGVVFIPLGVICLFASQGVVEIVDRYDTDCIPTSSRNNMVAYIQGEGDKICKRTITVTKAMKHPVYVYYQLENFYQNHRRYVKSRNDAQLRSPKEEHDVKTCAPEDNV-GGEPIVPCGLVAWSLFNDTYS 185
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: ALIS3_ARATH (ALA-interacting subunit 3 OS=Arabidopsis thaliana GN=ALIS3 PE=1 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 2.226e-60 Identity = 106/156 (67.95%), Postives = 126/156 (80.77%), Query Frame = 2 Query: 95 YSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSTASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPNGKPIVPCGLIAWSLFNDTY 562 YSKFTQQELPACKPILTP WVI TFL+V + F+P+G+ SL AS+DVVEIVDRY+T+CIP RT+KVA+IQ K C R + VTK MK+P+YVYYQL+NFYQNHRRYVKSR+D QL+ ++ S C+PED G+PIVPCGLIAWSLFNDTY Sbjct: 30 YSKFTQQELPACKPILTPGWVISTFLIVSVIFIPLGVISLFASQDVVEIVDRYDTECIPAPARTNKVAYIQGDGDKVCNRDLKVTKRMKQPIYVYYQLENFYQNHRRYVKSRSDSQLRSTKYENQISACKPEDDV-GGQPIVPCGLIAWSLFNDTY 184
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: ALIS1_ARATH (ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 2.461e-59 Identity = 103/156 (66.03%), Postives = 129/156 (82.69%), Query Frame = 2 Query: 95 YSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSTASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPNGKPIVPCGLIAWSLFNDTY 562 YSKFTQQELPACKPILTP WVI TFL++ + F+P+G+ SL AS+DVVEIVDRY++ CIP+++R +KVA+IQ T +K+CTR + V K MK+P+YVYYQL+NFYQNHRRYVKSR+D QL+ ++ C+PED G+PIVPCGLIAWSLFNDTY Sbjct: 31 YSKFTQQELPACKPILTPGWVISTFLIISVIFIPLGVISLFASQDVVEIVDRYDSACIPLSDRANKVAYIQGTGNKSCTRTLIVPKRMKQPIYVYYQLENFYQNHRRYVKSRSDSQLRSVKDENQIDACKPEDDF-GGQPIVPCGLIAWSLFNDTY 185
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: ALIS4_ARATH (Putative ALA-interacting subunit 4 OS=Arabidopsis thaliana GN=ALIS4 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 1.950e-56 Identity = 106/172 (61.63%), Postives = 124/172 (72.09%), Query Frame = 2 Query: 98 SKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDV-----------------VEIVDRYETDCIPVANRTDKVAFIQSTASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPNGKPIVPCGLIAWSLFNDTY 562 S+FTQQELPACKPILTPKWVILTFLV G+ F+P+G+ L AS+ V +EIVDRY+TDCIP+++R +KV +IQ K C R ITVTK MK PVYVYYQL+N+YQNHRRYVKSR D QL+ ET C PEDT G+PIVPCGL+AWSLFNDTY Sbjct: 17 SRFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGVCFKSFLTFLSYNYIYFVIEIVDRYDTDCIPLSSRDNKVRYIQGLEDKRCNRTITVTKTMKNPVYVYYQLENYYQNHRRYVKSRQDGQLRSPKDEHETKSCAPEDTL-GGQPIVPCGLVAWSLFNDTY 187
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: ALIS2_ARATH (Putative ALA-interacting subunit 2 OS=Arabidopsis thaliana GN=ALIS2 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 3.221e-51 Identity = 92/156 (58.97%), Postives = 123/156 (78.85%), Query Frame = 2 Query: 101 KFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFI-QSTASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPNGKPIVPCGLIAWSLFNDTYT 565 +F QQ+LPACKP+LTP VI F+++G F+PIG+ +L ASRD +EI+DRY+ +CIP RT+K+ +I S+ K CTR + V K+MK P+++YYQLDN+YQNHRRYVKSR+D+QL + S TS CEPE+++ NG PIVPCGLIAWS+FNDT+T Sbjct: 28 QFKQQKLPACKPVLTPISVITVFMLMGFVFIPIGLITLRASRDAIEIIDRYDVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPIFIYYQLDNYYQNHRRYVKSRSDQQLLHGLEYSHTSSCEPEESS-NGLPIVPCGLIAWSMFNDTFT 182
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: CC50A_CHICK (Cell cycle control protein 50A OS=Gallus gallus GN=TMEM30A PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.363e-25 Identity = 70/159 (44.03%), Postives = 92/159 (57.86%), Query Frame = 2 Query: 104 FTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPV-----ANRTDKVAFIQSTASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLK--KRSKTSETSQCEPEDTTPNGKPIVPCGLIAWSLFNDT 559 F QQ LPA +PILT V+ F ++G+ F+PIGI + S ++ E YE D V N+ V++ ST TCT T+ + V++YY L NFYQNHRRYVKSR+D QL S + + +CEP T + KPI PCG IA S+FNDT Sbjct: 42 FKQQRLPAWQPILTAGTVLPAFFIIGLIFIPIGIGIFVTSNNIRE----YEIDYTGVEPSSPCNKCLNVSW-DSTPPCTCTINFTLEHSFESNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDNSSLLNPSKECEPYRTNED-KPIAPCGAIANSMFNDT 194
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: CC50A_MOUSE (Cell cycle control protein 50A OS=Mus musculus GN=Tmem30a PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.357e-24 Identity = 64/155 (41.29%), Postives = 90/155 (58.06%), Query Frame = 2 Query: 104 FTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEI-VDRYETDCIPVANRTDKVAFIQSTASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLK--KRSKTSETSQCEPEDTTPNGKPIVPCGLIAWSLFNDT 559 F QQ LPA +PILT V+ TF ++G+ F+PIGI + S ++ EI +D T+ N+ + S CT T+ + + V++YY L NFYQNHRRYVKSR+D QL + + + +CEP + +PI PCG IA S+FNDT Sbjct: 33 FKQQRLPAWQPILTAGTVLPTFFIIGLIFIPIGIGIFVTSNNIREIEIDYTGTEPSSPCNK----CLSPNVTSCACTINFTLKQSFEGNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDPSALLNPSKECEPYRRNED-RPIAPCGAIANSMFNDT 182
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: CC50A_PONAB (Cell cycle control protein 50A OS=Pongo abelii GN=TMEM30A PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.726e-24 Identity = 65/155 (41.94%), Postives = 87/155 (56.13%), Query Frame = 2 Query: 104 FTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEI-VDRYETDCIPVANRTDKVAFIQSTASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKT--SETSQCEPEDTTPNGKPIVPCGLIAWSLFNDT 559 F QQ LPA +PILT V+ F ++G+ F+PIGI + S ++ EI +D T+ N+ CT T+ K + V++YY L NFYQNHRRYVKSR+D QL S + + +CEP + KPI PCG IA S+FNDT Sbjct: 33 FKQQRLPAWQPILTAGTVLPIFFIIGLIFIPIGIGIFVTSNNIREIEIDYTGTEPSSPCNK----CLSPDVTPCICTINFTLEKSFEGNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDSSALLNPSKECEPYRRNED-KPIAPCGAIANSMFNDT 182
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: CC50A_HUMAN (Cell cycle control protein 50A OS=Homo sapiens GN=TMEM30A PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.479e-24 Identity = 65/155 (41.94%), Postives = 87/155 (56.13%), Query Frame = 2 Query: 104 FTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEI-VDRYETDCIPVANRTDKVAFIQSTASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKT--SETSQCEPEDTTPNGKPIVPCGLIAWSLFNDT 559 F QQ LPA +PILT V+ F ++G+ F+PIGI + S ++ EI +D T+ N+ CT T+ K + V++YY L NFYQNHRRYVKSR+D QL S + + +CEP + KPI PCG IA S+FNDT Sbjct: 33 FKQQRLPAWQPILTAGTVLPIFFIIGLIFIPIGIGIFVTSNNIREIEIDYTGTEPSSPCNK----CLSPDVTPCFCTINFTLEKSFEGNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDSSALLNPSKECEPYRRNED-KPIAPCGAIANSMFNDT 182
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: YNI7_SCHPO (Uncharacterized protein C11B10.07c OS=Schizosaccharomyces pombe GN=SPBC11B10.07c PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.410e-22 Identity = 62/175 (35.43%), Postives = 90/175 (51.43%), Query Frame = 2 Query: 98 SKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANR---------------TDKVAFIQSTASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKT----SETSQCEPEDTTPNGKPIVPCGLIAWSLFNDTYT 565 S+F QQ LPA + I TP V+ ++GI F P+G +ASR V E+ Y TDC+ + + V + ++ CT + + + M PV+ +Y+L NFYQNHRRY S + QL ++T C+P + GKP PCG+IA SLFND+Y+ Sbjct: 21 SRFVQQTLPAWQFIFTPWTVLPLLFLLGIVFAPLGAGMFVASRRVKELRIDY-TDCMNIGDEFKQVPSTNIEFQYKNVKNVTAMWKSSGDVCTLRFQIPEEMTSPVFAFYRLKNFYQNHRRYTVSADMFQLLGEARTVAQLKSYGFCKPLEANEEGKPYYPCGIIANSLFNDSYS 194 The following BLAST results are available for this feature:
BLAST of CX308514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308514 ID=CX308514; Name=CX308514; organism=Citrus clementina; type=EST; length=566bpback to top |