CX308555
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308555 vs. ExPASy Swiss-Prot
Match: RGLG1_ARATH (E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana GN=RGLG1 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.694e-23 Identity = 62/140 (44.29%), Postives = 80/140 (57.14%), Query Frame = -3 Query: 2 SYGGSSMDHNYQPWSYTESSMDHSHQPTSYAGSSAHHSHQPMSYAGSSAHHNYQRP-------------QQATRFADNYNTLDEVISALREAGLESSNLILGIDFTKSNEWTGKYSFNRKSLHVISNIRNPYEQAISIIG 382 SYG Y S + ++ P SS H + YA +++ NY P ++ ++ +DNY++L +V AL AGLESSNLI+GIDFTKSNEWTG SFNRKSLH +SN NPYEQAI+IIG Sbjct: 61 SYGPQYSQEGYA--SQPNNPPPPTYAPAPSPASSYGHQYSQEGYASAASQPNYPPPPSQSQVADRKKFDRRYSKISDNYSSLLQVSEALGRAGLESSNLIVGIDFTKSNEWTGAKSFNRKSLHHLSNTPNPYEQAITIIG 198
BLAST of CX308555 vs. ExPASy Swiss-Prot
Match: RGLG2_ARATH (E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana GN=RGLG2 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.691e-22 Identity = 63/132 (47.73%), Postives = 81/132 (61.36%), Query Frame = -3 Query: 2 PSYGGSSMDHNYQPW-SYTESSMDHSHQPTSYAG---SSAHHSHQPMSYAGSSAHHNYQRPQQATRFADNYNTLDEVISALREAGLESSNLILGIDFTKSNEWTGKYSFNRKSLHVISNIRNPYEQAISIIG 385 P YG S +NY P SY + P Y+ S+ +S P GS +R + ++ +D+Y++L++V AL AGLESSNLI+GIDFTKSNEWTG SFNRKSLH I + NPYEQAI+IIG Sbjct: 37 PQYGAES--YNYPPPPSYAQPPEYTQPPPPLYSTQPYSAPSYSAPPSQSYGSDNKKRLER--KYSKISDDYSSLEQVTEALARAGLESSNLIVGIDFTKSNEWTGARSFNRKSLHFIGSSPNPYEQAITIIG 164
BLAST of CX308555 vs. ExPASy Swiss-Prot
Match: CPNA2_CAEEL (Copine domain-containing protein 2 OS=Caenorhabditis elegans GN=cpna-2 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 1.718e-11 Identity = 31/64 (48.44%), Postives = 47/64 (73.44%), Query Frame = -3 Query: 2 NYNTLDEVISALREAGLESSNLILGIDFTKSNEWTGKYSFNRKSLHVISNIR-NPYEQAISIIG 190 ++ TLD+++ A++ AGLE SNLI GID+TKSN + G+ +F+++ LH I NPY+Q I I+G Sbjct: 7298 HFKTLDDIVKAIKHAGLEYSNLIFGIDYTKSNFYQGERTFDKRPLHTIDPAEMNPYQQVIQIVG 7361 The following BLAST results are available for this feature:
BLAST of CX308555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308555 ID=CX308555; Name=CX308555; organism=Citrus clementina; type=EST; length=612bpback to top |