CX308558
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308558 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 207.608 bits (527), Expect = 1.575e-53 Identity = 101/114 (88.60%), Postives = 109/114 (95.61%), Query Frame = 1 Query: 1 KDYQSDHKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAV 342 KDYQSDHKF+ITTYSPTGV ITSSG+KKG+LFLADVNTQLKNKN+TTD+KVDT SNLFTTITVDE APGLKTILSF+VPDQRSGK+E+QYLHDYAGI TSVGLTANPIVNFS V Sbjct: 21 KDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLFTTITVDEAAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGV 134
BLAST of CX308558 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2) HSP 1 Score: 199.904 bits (507), Expect = 3.285e-51 Identity = 99/114 (86.84%), Postives = 107/114 (93.86%), Query Frame = 1 Query: 1 KDYQSDHKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAV 342 KDY SD KFTI+TYSPTGVAITSSGTKKGELFL DVNTQLKNKNITTD+KVDT SNLFTTITV+EPAPG+K ILSFKVP+Q SGKVELQYLH+YAGIS+SVGL ANPIVNFS+V Sbjct: 21 KDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNITTDIKVDTNSNLFTTITVNEPAPGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSV 134
BLAST of CX308558 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 6.195e-50 Identity = 94/114 (82.46%), Postives = 107/114 (93.86%), Query Frame = 1 Query: 1 KDYQSDHKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAV 342 +DY SDHKFT+TTYS TGVAIT+SG KKGELFLADV+TQLKNKNITTD+KVDT SN++TTITVDEPAPGLKTI SF VPDQ+SGKVELQYLH+YAGI+TS+GLTA+P+VNFS V Sbjct: 21 RDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGV 134
BLAST of CX308558 vs. ExPASy Swiss-Prot
Match: VDAC2_ARATH (Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=HSR2 PE=1 SV=3) HSP 1 Score: 164.466 bits (415), Expect = 1.530e-40 Identity = 78/114 (68.42%), Postives = 91/114 (79.82%), Query Frame = 1 Query: 1 KDYQSDHKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAV 342 +DYQ D KF++TTYS TGVAIT++GT KG LFL DV TQ+KN N T D+KV T S+L TT+T DEPAPGLK I+ K+PD +SGK E+QY HDYAGISTSVG TA PIVNFS V Sbjct: 21 RDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGV 134
BLAST of CX308558 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=At3g01280 PE=1 SV=3) HSP 1 Score: 163.696 bits (413), Expect = 2.609e-40 Identity = 82/114 (71.93%), Postives = 92/114 (80.70%), Query Frame = 1 Query: 1 KDYQSDHKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAV 342 KD+ SD KF+ITT+SP GVAITS+GTKKG+L L DV Q + KNITTDLKV T S T TVDE APGL++I SFKVPDQ SGKVELQYLH+YAGISTS+GLT NP VNFS V Sbjct: 21 KDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGV 134
BLAST of CX308558 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3) HSP 1 Score: 160.999 bits (406), Expect = 1.691e-39 Identity = 73/114 (64.04%), Postives = 95/114 (83.33%), Query Frame = 1 Query: 1 KDYQSDHKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAV 342 +DYQ+DHKFT+TTY+ GVAIT++ TKK +L ++ +Q+KNKNIT D+K ++ SN+ TT+TVDE PGLK+ILSF VPDQRSGK ELQY HDYAG+S S+GLTA+P+VN S+V Sbjct: 20 RDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNITVDVKANSDSNVVTTVTVDELTPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGLTASPVVNLSSV 133
BLAST of CX308558 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.885e-39 Identity = 75/113 (66.37%), Postives = 96/113 (84.96%), Query Frame = 1 Query: 1 KDYQSDHKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDE-PAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFS 336 +DYQ+DHKFT+TTY+ G AIT++ TKK +L + ++ +Q+KNKNIT D+K ++ASN+ TTIT D+ APGLKTILSF VPDQ+SGKVELQYLHDYAGI+ S+GLTANP+VN S Sbjct: 20 RDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLS 132
BLAST of CX308558 vs. ExPASy Swiss-Prot
Match: VDAC_MAIZE (Outer plastidial membrane protein porin OS=Zea mays GN=POR1 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.533e-32 Identity = 65/113 (57.52%), Postives = 88/113 (77.88%), Query Frame = 1 Query: 1 KDYQSDHKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDE-PAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFS 336 KDY + KF +TT SP GVAIT++GT+K E +++TQ+KNK +T D+K ++ S+L TTITVDE PGLK+I++ VPDQRSGK+E QYLH+YAG++ SVGL +NP+VN S Sbjct: 21 KDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLTVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLNSNPMVNLS 133 The following BLAST results are available for this feature:
BLAST of CX308558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308558 ID=CX308558; Name=CX308558; organism=Citrus clementina; type=EST; length=344bpback to top |