CX308676
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308676 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.749e-20 Identity = 46/76 (60.53%), Postives = 57/76 (75.00%), Query Frame = -3 Query: 2 TPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTDFCFVEEISKTNPY 217 T FF+GIKNQA + CEGK FYTR AF+SA+++YP F T KRE+AAFFAHVTHET FC++ EI+K+N Y Sbjct: 85 TDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHETGHFCYISEINKSNAY 160
BLAST of CX308676 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.481e-19 Identity = 44/76 (57.89%), Postives = 54/76 (71.05%), Query Frame = -3 Query: 2 TPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEF----GRTDTKREVAAFFAHVTHETTDFCFVEEISKTNPY 217 T FF+GIKNQA + CEGK FYTR AF+SA+ YP F + KRE+AAFFAH THET FC++ EI+K+N Y Sbjct: 74 TSSFFNGIKNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHETGHFCYISEINKSNAY 149
BLAST of CX308676 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.647e-18 Identity = 42/70 (60.00%), Postives = 49/70 (70.00%), Query Frame = -3 Query: 20 TPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETTDFCFVEEI 217 TPEFF + QA C KGFYTRDAF++A YP FGRT D+KRE+AAFFAH HET FC++EEI Sbjct: 73 TPEFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIKFCYIEEI 142
BLAST of CX308676 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.061e-17 Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = -3 Query: 20 TPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETTDFCFVEEI 217 T +F +GI +QA + C GK FYTRDAF+SAL+SY +FGR D+KRE+AA FAH THET FC++EEI Sbjct: 73 TADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHETGHFCYIEEI 142
BLAST of CX308676 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.267e-17 Identity = 41/71 (57.75%), Postives = 50/71 (70.42%), Query Frame = -3 Query: 17 TPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGR----TDTKREVAAFFAHVTHETTDFCFVEEIS 217 T FF+GIKNQAP C GK FYTR +F++A SY F R D+KRE+AAFFAHVTHET C++ EI+ Sbjct: 92 TEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHETGHMCYINEIN 162
BLAST of CX308676 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 6.879e-17 Identity = 41/74 (55.41%), Postives = 50/74 (67.57%), Query Frame = -3 Query: 8 TPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFG----RTDTKREVAAFFAHVTHETTDFCFVEEISKTN 217 T FF+GIKNQAP C GK FYTR +F++A SY F D+KRE+AAFFAHVTHET C++ EI+ N Sbjct: 89 TEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGHMCYINEINGAN 162
BLAST of CX308676 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 8.984e-17 Identity = 40/69 (57.97%), Postives = 49/69 (71.01%), Query Frame = -3 Query: 23 TPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGR----TDTKREVAAFFAHVTHETTDFCFVEE 217 T EF+DGI +QA A C GK FYTR F+ A+S+YP FG D KRE+AA+FAHVTHET C++EE Sbjct: 51 TQEFWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGHLCYIEE 119
BLAST of CX308676 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 8.984e-17 Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = -3 Query: 17 TPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDTKREVAAFFAHVTHETTDFCFVEEIS 217 T FF+GI NQA C GK FYTRD+FI+A +++P F + T+RE+A FAH THET FC++EEI+ Sbjct: 77 TQAFFNGIINQAGGGCAGKNFYTRDSFINAANTFPNFANSVTRREIATMFAHFTHETGHFCYIEEIN 143
BLAST of CX308676 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.930e-15 Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = -3 Query: 23 FFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETTDFCFVEE 208 FFDGI QA A+C GK FYTR AF+SA+ P+FG D KRE+AAFFAH++HETT+ C +EE Sbjct: 95 FFDGIIGQAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTNLCHIEE 158 The following BLAST results are available for this feature:
BLAST of CX308676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308676 ID=CX308676; Name=CX308676; organism=Citrus clementina; type=EST; length=222bpback to top |