CX308727

Overview
NameCX308727
Unique NameCX308727
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length490
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX308727 vs. ExPASy Swiss-Prot
Match: P2C51_ARATH (Probable protein phosphatase 2C 51 OS=Arabidopsis thaliana GN=At3g63340 PE=2 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 9.426e-58
Identity = 106/162 (65.43%), Postives = 132/162 (81.48%), Query Frame = 3
Query:    3 IAEGQILVANIGDSKALLCSEKFQSPAEAKATLLRLYRKRRDNNAISTSQGYNYLKSTVSNGLAHFTVKELTRDHHPDREDERYRVEAAGGYVLQWGGVSRVNGQLAVSRAIGDLSYKSYGVISVPEVTDWQSLTANDSYLVAASDGVFEKLSLQDICDVFW 488
            IA+GQ++VA+IGDSKALLCSEKF++  EA+ATL++LYR+RR N   S S+ ++  K    NGL  F  KELT+DHHP+REDE+ RVEAAGGYV +W GV RVNGQL VSRAIGDL+Y+SYGVIS PEV DWQ L ANDS+LV +SDG+FEKL +Q++CD+ W
Sbjct:  241 IADGQLMVASIGDSKALLCSEKFETLEEARATLVKLYRERRRNRGSSPSR-FSDFKLEHGNGLLRFIAKELTKDHHPNREDEKIRVEAAGGYVTEWAGVPRVNGQLTVSRAIGDLTYRSYGVISAPEVMDWQPLVANDSFLVVSSDGIFEKLEVQEVCDLLW 401          
BLAST of CX308727 vs. ExPASy Swiss-Prot
Match: P2C50_ARATH (Putative protein phosphatase 2C 50 OS=Arabidopsis thaliana GN=At3g63320 PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 9.426e-58
Identity = 108/162 (66.67%), Postives = 131/162 (80.86%), Query Frame = 3
Query:    3 IAEGQILVANIGDSKALLCSEKFQSPAEAKATLLRLYRKRRDNNAISTSQGYNYLKSTVSNGLAHFTVKELTRDHHPDREDERYRVEAAGGYVLQWGGVSRVNGQLAVSRAIGDLSYKSYGVISVPEVTDWQSLTANDSYLVAASDGVFEKLSLQDICDVFW 488
            IA+GQ+LVA+IGDSKALLCSE++++P EAKATL++LYR+R+ N   S S+ ++ LK     GL  F  KELT+DHHPDREDE  RV+AAGGYV +W GV RVNGQLAVSR+IGDL+Y+SYGVIS PEV DWQ L ANDSYLV +SDG+FEKL +QD CD  W
Sbjct:  176 IADGQLLVASIGDSKALLCSERYETPEEAKATLIKLYRERKRNQDSSPSR-FSDLKLEHRTGLMRFIAKELTKDHHPDREDEMLRVKAAGGYVTKWAGVPRVNGQLAVSRSIGDLTYRSYGVISAPEVMDWQPLVANDSYLVVSSDGIFEKLEVQDACDRLW 336          
BLAST of CX308727 vs. ExPASy Swiss-Prot
Match: P2C76_ORYSJ (Putative protein phosphatase 2C 76 OS=Oryza sativa subsp. japonica GN=Os11g0586100 PE=3 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 3.360e-47
Identity = 93/166 (56.02%), Postives = 121/166 (72.89%), Query Frame = 3
Query:    3 IAEGQILVANIGDSKALLCSEKFQSPAEAKATLLRLYRKR------RDNNAISTSQGYNYLKSTVSNGLAHFTVKELTRDHHPDREDERYRVEAAGGYVLQWGGVSRVNGQLAVSRAIGDLSYKSYGVISVPEVTDWQSLTANDSYLVAASDGVFEKLSLQDICDV 482
            I +GQI+ AN+GDSKA LCSE   S  + K +++   R+R      RD+ A++   G  Y             VKELT+DHHPDREDER RVEAAGGYVL+W GV RVNG+LA+SRAIGD+ YK YGVI  PE+T+WQSL+AND++L+A+SDGVFEK+++QD+CD+
Sbjct:  258 IVDGQIIAANVGDSKAFLCSESHDSSIDKKTSVVSGKRRRKRNSNNRDDFALANYDGPFY------------NVKELTKDHHPDREDERSRVEAAGGYVLEWAGVHRVNGELALSRAIGDVPYKRYGVIPTPELTEWQSLSANDTFLIASSDGVFEKMTMQDVCDL 411          
BLAST of CX308727 vs. ExPASy Swiss-Prot
Match: PPM1K_MOUSE (Protein phosphatase 1K, mitochondrial OS=Mus musculus GN=Ppm1k PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.429e-15
Identity = 42/92 (45.65%), Postives = 63/92 (68.48%), Query Frame = 3
Query:  210 ELTRDHHPDREDERYRVEAAGGYVLQWG--GVSRVNGQLAVSRAIGDLSYKSYGVISVPEVTDWQSLTANDSYLVAASDGVFEKLSLQDICD 479
            +LT DH P+R+DE+ R++  GG+V  W   G   VNG+LA++R+IGDL  K+ GVI+ PE T  +   A+DS+LV  +DG+   ++ Q+ICD
Sbjct:  221 KLTTDHTPERKDEKERIKKFGGFVA-WNSLGQPHVNGRLAMTRSIGDLDLKASGVIAEPETTRIKLYHADDSFLVLTTDGINFMVNSQEICD 311          
BLAST of CX308727 vs. ExPASy Swiss-Prot
Match: P2C53_ORYSJ (Probable protein phosphatase 2C 53 OS=Oryza sativa subsp. japonica GN=Os05g0592800 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.785e-15
Identity = 55/159 (34.59%), Postives = 77/159 (48.43%), Query Frame = 3
Query:    3 IAEGQILVANIGDSKALLCSEKFQSPAEAKATLLRLYRKRRDNNAISTSQGYNYLKSTVSNGLAHFTVKELTRDHHPDREDERYRVEAAGGYVLQWGGVSRVNGQLAVSRAIGDLSYKSYGVISVPEVTDWQSLTANDSYLVAASDGVFEKLSLQDICD 479
            +    ++VAN GDS+A+LC  K   P                                            L+ DH P+REDE  R+EA GG V+QW G  RV G LA+SR+IGD   K Y +I VPEVT   +   +D  L+ ASDG+++ +S +++CD
Sbjct:  264 VCSSHVIVANCGDSRAVLCRGKQPLP--------------------------------------------LSLDHKPNREDEYARIEALGGKVIQWNGY-RVLGVLAMSRSIGDKYLKPY-IIPVPEVT-VVARAKDDDCLILASDGLWDVMSNEEVCD 375          
BLAST of CX308727 vs. ExPASy Swiss-Prot
Match: P2C06_ORYSJ (Probable protein phosphatase 2C 6 OS=Oryza sativa subsp. japonica GN=Os01g0583100 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 9.868e-15
Identity = 57/160 (35.62%), Postives = 77/160 (48.12%), Query Frame = 3
Query:    3 IAEGQILVANIGDSKALLCSEKFQSPAEAKATLLRLYRKRRDNNAISTSQGYNYLKSTVSNGLAHFTVKELTRDHHPDREDERYRVEAAGGYVLQWGGVSRVNGQLAVSRAIGDLSYKSYGVISVPEVTDWQSLTANDSYLVAASDGVFEKLSLQDICDV 482
            I    I+VAN GDS+A+LC  K   P                                            L+ DH P+REDE  R+EA GG V+QW G  RV G LA+SR+IGD   K + +I VPE+T       +D  LV ASDG+++ +S +++CDV
Sbjct:  288 ICSSHIIVANCGDSRAVLCRGKQPVP--------------------------------------------LSVDHKPNREDEYARIEAEGGKVIQWNGY-RVFGVLAMSRSIGDRYLKPW-IIPVPEIT-IVPRAKDDECLVLASDGLWDVMSNEEVCDV 400          
BLAST of CX308727 vs. ExPASy Swiss-Prot
Match: P2C16_ARATH (Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.683e-14
Identity = 44/90 (48.89%), Postives = 62/90 (68.89%), Query Frame = 3
Query:  213 LTRDHHPDREDERYRVEAAGGYVLQWGGVSRVNGQLAVSRAIGDLSYKSYGVISVPEVTDWQSLTANDSYLVAASDGVFEKLSLQDICDV 482
            L+ DH PDREDE  R+E AGG V+QW G +RV G LA+SR+IGD   K Y VI  PEVT +   +  D  L+ ASDG+++ ++ Q++C++
Sbjct:  360 LSVDHKPDREDEYARIENAGGKVIQWQG-ARVFGVLAMSRSIGDRYLKPY-VIPEPEVT-FMPRSREDECLILASDGLWDVMNNQEVCEI 446          
BLAST of CX308727 vs. ExPASy Swiss-Prot
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.198e-14
Identity = 52/152 (34.21%), Postives = 79/152 (51.97%), Query Frame = 3
Query:   15 QILVANIGDSKALLCSEKFQSPAEAKATLLRLYRKRRDNNAISTSQGYNYLKSTVSNGLAHFTVKELTRDHHPDREDERYRVEAAGGYVLQWGGVSRVNGQLAVSRAIGDLSYKSYGVISVPEVTDWQSLTANDSYLVAASDGVFEKLSLQD 470
            ++LVAN+GDS+A++C                     R  NAI+ S                       RDH PD+ DER R+E AGG+V+ W G  RV G LAVSRA GD   K Y V++ PE+ + + + ++  +L+ ASDG+++ +S ++
Sbjct:  137 RLLVANVGDSRAVIC---------------------RGGNAIAVS-----------------------RDHKPDQSDERQRIEDAGGFVM-WAGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIQE-EKVDSSLEFLILASDGLWDVVSNEE 241          
BLAST of CX308727 vs. ExPASy Swiss-Prot
Match: P2C25_ARATH (Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana GN=At2g30020 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.198e-14
Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 3
Query:  207 KELTRDHHPDREDERYRVEAAGGYVLQWGGVSRVNGQLAVSRAIGDLSYKSYGVISVPEVTDWQSLTANDSYLVAASDGVFEKLSLQDICDV 482
            K L+ DH P R+DER R+E  GGYV  + GV R+ G LAVSR IGD   K + VI+ PE T    +  +  +L+ ASDG+++K+S Q+  D+
Sbjct:  263 KALSSDHRPSRDDERKRIETTGGYVDTFHGVWRIQGSLAVSRGIGDAQLKKW-VIAEPE-TKISRIEHDHEFLILASDGLWDKVSNQEAVDI 352          
BLAST of CX308727 vs. ExPASy Swiss-Prot
Match: P2C02_ARATH (Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.871e-14
Identity = 40/90 (44.44%), Postives = 59/90 (65.56%), Query Frame = 3
Query:  213 LTRDHHPDREDERYRVEAAGGYVLQWGGVSRVNGQLAVSRAIGDLSYKSYGVISVPEVTDWQSLTANDSYLVAASDGVFEKLSLQDICDV 482
            LT DH P R+DER R+E++GGYV  +  V R+ G LAVSR IGD   K + +IS PE+   + +     +L+ ASDG+++K+S Q+  D+
Sbjct:  248 LTSDHRPSRDDERNRIESSGGYVDTFNSVWRIQGSLAVSRGIGDAHLKQW-IISEPEINILR-INPQHEFLILASDGLWDKVSNQEAVDI 335          
The following BLAST results are available for this feature:
BLAST of CX308727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
P2C51_ARATH9.426e-5865.43Probable protein phosphatase 2C 51 OS=Arabidopsis ... [more]
P2C50_ARATH9.426e-5866.67Putative protein phosphatase 2C 50 OS=Arabidopsis ... [more]
P2C76_ORYSJ3.360e-4756.02Putative protein phosphatase 2C 76 OS=Oryza sativa... [more]
PPM1K_MOUSE4.429e-1545.65Protein phosphatase 1K, mitochondrial OS=Mus muscu... [more]
P2C53_ORYSJ5.785e-1534.59Probable protein phosphatase 2C 53 OS=Oryza sativa... [more]
P2C06_ORYSJ9.868e-1535.63Probable protein phosphatase 2C 6 OS=Oryza sativa ... [more]
P2C16_ARATH1.683e-1448.89Protein phosphatase 2C 16 OS=Arabidopsis thaliana ... [more]
P2C59_ARATH2.198e-1434.21Probable protein phosphatase 2C 59 OS=Arabidopsis ... [more]
P2C25_ARATH2.198e-1445.65Probable protein phosphatase 2C 25 OS=Arabidopsis ... [more]
P2C02_ARATH2.871e-1444.44Probable protein phosphatase 2C 2 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionC21003B06Rv AbsLeaSub1 Citrus clementina cDNA clone C21003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308727 ID=CX308727; Name=CX308727; organism=Citrus clementina; type=EST; length=490bp
TGATAGCAGAGGGCCAAATTTTAGTTGCCAACATTGGAGATTCAAAAGCT
CTTCTGTGCTCTGAAAAATTTCAGTCTCCTGCTGAGGCCAAAGCTACTTT
ATTAAGGTTATACAGGAAGCGAAGGGATAATAATGCTATTTCAACTTCAC
AAGGTTATAATTACTTAAAATCCACAGTATCCAATGGACTTGCACATTTT
ACAGTCAAGGAACTGACAAGAGATCATCATCCGGATAGGGAAGATGAAAG
GTATCGAGTGGAGGCTGCCGGTGGTTATGTTCTTCAGTGGGGTGGTGTTT
CACGAGTAAATGGCCAGCTAGCTGTTTCCCGAGCTATTGGAGATTTATCT
TATAAAAGTTATGGTGTTATATCTGTGCCGGAGGTGACAGATTGGCAATC
TCTGACTGCCAATGATAGTTATCTGGTAGCTGCATCTGATGGTGTGTTTG
AAAAGCTGAGTTTGCAAGACATTTGTGATGTATTTTGGGA
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