CX308839
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL30_LUPLU (60S ribosomal protein L30 OS=Lupinus luteus GN=RPL30 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.910e-20 Identity = 46/50 (92.00%), Postives = 50/50 (100.00%), Query Frame = 2 Query: 68 HESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 HESINNRLALVMKSGKYTLGYKTVL+SLR+SKGKLII++NNCPPLRKSEI Sbjct: 11 HESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL30_EUPES (60S ribosomal protein L30 OS=Euphorbia esula GN=RPL30 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.643e-18 Identity = 43/50 (86.00%), Postives = 49/50 (98.00%), Query Frame = 2 Query: 68 HESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 HESIN+RLALVMKSGK+TLGYKTVL SLR++KGKLII++NNCPPLRKSEI Sbjct: 11 HESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEI 60
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL303_ARATH (60S ribosomal protein L30-3 OS=Arabidopsis thaliana GN=RPL30C PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.152e-18 Identity = 41/50 (82.00%), Postives = 49/50 (98.00%), Query Frame = 2 Query: 68 HESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 HE IN+RLALVMKSGKYTLGYK+VL+SLR+SKGKLI++S+NCPPLR+SEI Sbjct: 11 HEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL301_ARATH (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana GN=RPL30A PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.152e-18 Identity = 41/50 (82.00%), Postives = 49/50 (98.00%), Query Frame = 2 Query: 68 HESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 HE IN+RLALVMKSGKYTLGYK+VL+SLR+SKGKLI++S+NCPPLR+SEI Sbjct: 11 HEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL302_ARATH (60S ribosomal protein L30-2 OS=Arabidopsis thaliana GN=RPL30B PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.391e-17 Identity = 41/50 (82.00%), Postives = 47/50 (94.00%), Query Frame = 2 Query: 68 HESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 HE IN+RLALVMKSGKYTLGYK+VL+SLR SKGKLI++S NCPPLR+SEI Sbjct: 11 HEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL30_WHEAT (60S ribosomal protein L30 OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 5.284e-17 Identity = 41/49 (83.67%), Postives = 47/49 (95.92%), Query Frame = 2 Query: 71 ESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 E+INN+L LVMKSGKYTLGYKTVL++LR+S GKLIIL+NNCPPLRKSEI Sbjct: 12 ENINNKLQLVMKSGKYTLGYKTVLKTLRSSLGKLIILANNCPPLRKSEI 60
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL30_ORYSJ (60S ribosomal protein L30 OS=Oryza sativa subsp. japonica GN=RPL30 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.013e-17 Identity = 40/49 (81.63%), Postives = 46/49 (93.88%), Query Frame = 2 Query: 71 ESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 ++INN+L LVMKSGKYTLGYKTVLR+LR SK KL+I+SNNCPPLRKSEI Sbjct: 12 DNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEI 60
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL30_MAIZE (60S ribosomal protein L30 OS=Zea mays GN=RPL30 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.008e-16 Identity = 39/49 (79.59%), Postives = 46/49 (93.88%), Query Frame = 2 Query: 71 ESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 ++INN+L LVMKSGKYTLGYKTVLR+LR SK KL+I++NNCPPLRKSEI Sbjct: 12 DNINNKLQLVMKSGKYTLGYKTVLRTLRNSKSKLVIIANNCPPLRKSEI 60
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL30_RAT (60S ribosomal protein L30 OS=Rattus norvegicus GN=Rpl30 PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 2.714e-13 Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 2 Query: 71 ESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 ESIN+RL LVMKSGKY LGYK L+ +R K KL+IL+NNCP LRKSEI Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL30_OPHHA (60S ribosomal protein L30 OS=Ophiophagus hannah GN=RPL30 PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 2.714e-13 Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 2 Query: 71 ESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 ESIN+RL LVMKSGKY LGYK L+ +R K KL+IL+NNCP LRKSEI Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60 The following BLAST results are available for this feature:
BLAST of CX308839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308839 ID=CX308839; Name=CX308839; organism=Citrus clementina; type=EST; length=218bpback to top |