CX308848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308848 vs. ExPASy Swiss-Prot
Match: NDH_DICDI (Probable NADH dehydrogenase OS=Dictyostelium discoideum GN=DDB_G0270104 PE=3 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 2.228e-24 Identity = 63/143 (44.06%), Postives = 90/143 (62.94%), Query Frame = 1 Query: 1 LEFRSVAEPVSRIQTSLSSDPNSYFYL-ASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHVQEIRKKPLLNLMLSENPGISEEERKRLLHCVVIGGGPTGVEFSGELSDF 426 LEFRS+AEPV + D N + Y+ AS I+ + + V ++ H F++ YDKLVI G+ TFGIKGV+ENA FL+E++H +EIR+K + + P +S EER+RLL V++GGG TG+EF+ EL+DF Sbjct: 88 LEFRSIAEPVRTTR-----DINEFKYIQASVTSINPENNSVLVKST-----FHNEKPFEMKYDKLVIGVGSRNNTFGIKGVEENANFLKELHHAREIRQKIIECFERASLPDVSTEERERLLSFVIVGGGATGIEFTSELNDF 220
BLAST of CX308848 vs. ExPASy Swiss-Prot
Match: NDH2_YEAST (External NADH-ubiquinone oxidoreductase 2, mitochondrial OS=Saccharomyces cerevisiae GN=NDE2 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.386e-18 Identity = 54/144 (37.50%), Postives = 81/144 (56.25%), Query Frame = 1 Query: 1 LEFRSVAEPVSRIQTSLSSDPNSYFYL-ASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHVQEIRKKPLLNLMLSENPGISEEERKRLLHCVVIGGGPTGVEFSGELSDFI 429 +E +S+ EPV I P Y+ A + +D +V ++V+ E ++YD LV++ GA+ TF I GV NA FL+E+ Q IR K + + + + +++ ERKRLL VV+GGGPTGVEF+ EL D+I Sbjct: 146 IEMKSIVEPVRSIARRT---PGEVHYIEAEALDVDPKAKKVMVQSVSED----EYFVSSLSYDYLVVSVGAKTTTFNIPGVYGNANFLKEIEDAQNIRMKLMKTIEQASSFPVNDPERKRLLTFVVVGGGPTGVEFAAELQDYI 282
BLAST of CX308848 vs. ExPASy Swiss-Prot
Match: NDI1_YEAST (Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial OS=Saccharomyces cerevisiae GN=NDI1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 3.117e-18 Identity = 55/149 (36.91%), Postives = 85/149 (57.05%), Query Frame = 1 Query: 10 RSVAEPVSRIQTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEP------HQFKVA---YDKLVIAAGAEPLTFGIKGVKENAYFLREVNHVQEIRKKPLLNLMLSENPGISEEERKRLLHCVVIGGGPTGVEFSGELSDFI 429 +S+ EP+ + +L N +Y A I+ D++ V ++++ ++P HQ + A YD L+ A GAEP TFGI GV + +FL+E+ + EIR+ NL + + ER+RLL VV+GGGPTGVE +GEL D++ Sbjct: 105 KSIIEPI--VNFALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYV 251
BLAST of CX308848 vs. ExPASy Swiss-Prot
Match: NDH1_YEAST (External NADH-ubiquinone oxidoreductase 1, mitochondrial OS=Saccharomyces cerevisiae GN=NDE1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 3.117e-18 Identity = 50/143 (34.97%), Postives = 80/143 (55.94%), Query Frame = 1 Query: 1 LEFRSVAEPVSRIQTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHVQEIRKKPLLNLMLSENPGISEEERKRLLHCVVIGGGPTGVEFSGELSDFI 429 +E +S+ EPV I + S ++Y A +D + + ++ + + + YD LV+ GA+P TFG GV E + FL+E++ QEIR K + ++ + + + ER RLL VV+GGGPTGVEF+ EL D++ Sbjct: 161 IELKSIVEPVRTI--ARRSHGEVHYYEAEAYDVDPENKTIKVKS----SAKNNDYDLDLKYDYLVVGVGAQPNTFGTPGVYEYSSFLKEISDAQEIRLKIMSSIEKAASLSPKDPERARLLSFVVVGGGPTGVEFAAELRDYV 297
BLAST of CX308848 vs. ExPASy Swiss-Prot
Match: NDH1_SCHPO (Probable NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial OS=Schizosaccharomyces pombe GN=SPAC3A11.07 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.943e-18 Identity = 51/140 (36.43%), Postives = 78/140 (55.71%), Query Frame = 1 Query: 10 RSVAEPVSRIQTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHVQEIRKKPLLNLMLSENPGISEEERKRLLHCVVIGGGPTGVEFSGELSDFI 429 RS+ +P+ + S FY A C +D DK ++ + + E ++ YD LV + GAE TF I G+ E FL+E+ Q+IR + L L ++ + E R+R +H VV+GGGPTG+EF+GE++DFI Sbjct: 143 RSIVQPIRYMLRHKSCYVK--FYEAECTDVDADKKVIHIKKTTTDGVDLEQ---EIKYDYLVCSHGAETQTFNIPGIAEYGCFLKEIWDAQKIRARILHCLEQAQFKDLPAETRRRYVHTVVVGGGPTGMEFAGEMADFI 277
BLAST of CX308848 vs. ExPASy Swiss-Prot
Match: NDH2_SCHPO (Probable NADH-ubiquinone oxidoreductase C947.15c, mitochondrial OS=Schizosaccharomyces pombe GN=SPBC947.15c PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.446e-17 Identity = 53/144 (36.81%), Postives = 80/144 (55.56%), Query Frame = 1 Query: 1 LEFRSVAEPVSRIQTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHVQEIRKKPLLNL-MLSENPGISEEERKRLLHCVVIGGGPTGVEFSGELSDFI 429 L S+ EP+ + DP++ + A C IDT +V T+ ++E + + YD LV A GA TFGI+GV+++ FL+E +++ + L + N +S EER RLLH V+GGGPTG+EF+ E+ DFI Sbjct: 139 LRLPSITEPIVALFKG-KIDPSN-IHQAECTAIDTSAKKV---TIRGTTEANEGKEAVIPYDTLVFAIGAGNQTFGIQGVRDHGCFLKEAGDAKKVFNRIFEILEQVRFNKDLSPEERARLLHITVVGGGPTGMEFAAEMQDFI 277 The following BLAST results are available for this feature:
BLAST of CX308848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308848 ID=CX308848; Name=CX308848; organism=Citrus clementina; type=EST; length=437bpback to top |