CX308911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308911 vs. ExPASy Swiss-Prot
Match: RL30_LUPLU (60S ribosomal protein L30 OS=Lupinus luteus GN=RPL30 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.030e-20 Identity = 46/50 (92.00%), Postives = 50/50 (100.00%), Query Frame = -3 Query: 3 HESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 152 HESINNRLALVMKSGKYTLGYKTVL+SLRSSKGKLI+++NNCPPLRKSEI Sbjct: 11 HESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60
BLAST of CX308911 vs. ExPASy Swiss-Prot
Match: RL30_EUPES (60S ribosomal protein L30 OS=Euphorbia esula GN=RPL30 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.273e-18 Identity = 43/50 (86.00%), Postives = 49/50 (98.00%), Query Frame = -3 Query: 3 HESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 152 HESIN+RLALVMKSGK+TLGYKTVL SLRS+KGKLI+++NNCPPLRKSEI Sbjct: 11 HESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEI 60
BLAST of CX308911 vs. ExPASy Swiss-Prot
Match: RL303_ARATH (60S ribosomal protein L30-3 OS=Arabidopsis thaliana GN=RPL30C PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.171e-18 Identity = 43/50 (86.00%), Postives = 49/50 (98.00%), Query Frame = -3 Query: 3 HESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 152 HE IN+RLALVMKSGKYTLGYK+VL+SLRSSKGKLIL+S+NCPPLR+SEI Sbjct: 11 HEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60
BLAST of CX308911 vs. ExPASy Swiss-Prot
Match: RL301_ARATH (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana GN=RPL30A PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.171e-18 Identity = 43/50 (86.00%), Postives = 49/50 (98.00%), Query Frame = -3 Query: 3 HESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 152 HE IN+RLALVMKSGKYTLGYK+VL+SLRSSKGKLIL+S+NCPPLR+SEI Sbjct: 11 HEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60
BLAST of CX308911 vs. ExPASy Swiss-Prot
Match: RL302_ARATH (60S ribosomal protein L30-2 OS=Arabidopsis thaliana GN=RPL30B PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.251e-18 Identity = 42/50 (84.00%), Postives = 47/50 (94.00%), Query Frame = -3 Query: 3 HESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 152 HE IN+RLALVMKSGKYTLGYK+VL+SLR SKGKLIL+S NCPPLR+SEI Sbjct: 11 HEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60
BLAST of CX308911 vs. ExPASy Swiss-Prot
Match: RL30_WHEAT (60S ribosomal protein L30 OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 4.095e-17 Identity = 41/49 (83.67%), Postives = 47/49 (95.92%), Query Frame = -3 Query: 3 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 149 E+INN+L LVMKSGKYTLGYKTVL++LRSS GKLI+L+NNCPPLRKSEI Sbjct: 12 ENINNKLQLVMKSGKYTLGYKTVLKTLRSSLGKLIILANNCPPLRKSEI 60
BLAST of CX308911 vs. ExPASy Swiss-Prot
Match: RL30_ORYSJ (60S ribosomal protein L30 OS=Oryza sativa subsp. japonica GN=RPL30 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.985e-17 Identity = 39/49 (79.59%), Postives = 47/49 (95.92%), Query Frame = -3 Query: 3 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 149 ++INN+L LVMKSGKYTLGYKTVLR+LR+SK KL+++SNNCPPLRKSEI Sbjct: 12 DNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEI 60
BLAST of CX308911 vs. ExPASy Swiss-Prot
Match: RL30_MAIZE (60S ribosomal protein L30 OS=Zea mays GN=RPL30 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.556e-16 Identity = 38/49 (77.55%), Postives = 47/49 (95.92%), Query Frame = -3 Query: 3 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 149 ++INN+L LVMKSGKYTLGYKTVLR+LR+SK KL++++NNCPPLRKSEI Sbjct: 12 DNINNKLQLVMKSGKYTLGYKTVLRTLRNSKSKLVIIANNCPPLRKSEI 60
BLAST of CX308911 vs. ExPASy Swiss-Prot
Match: RL30_RAT (60S ribosomal protein L30 OS=Rattus norvegicus GN=Rpl30 PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 3.587e-13 Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = -3 Query: 3 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 149 ESIN+RL LVMKSGKY LGYK L+ +R K KL++L+NNCP LRKSEI Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
BLAST of CX308911 vs. ExPASy Swiss-Prot
Match: RL30_OPHHA (60S ribosomal protein L30 OS=Ophiophagus hannah GN=RPL30 PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 3.587e-13 Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = -3 Query: 3 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 149 ESIN+RL LVMKSGKY LGYK L+ +R K KL++L+NNCP LRKSEI Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60 The following BLAST results are available for this feature:
BLAST of CX308911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308911 ID=CX308911; Name=CX308911; organism=Citrus clementina; type=EST; length=244bpback to top |