CX308916
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308916 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.258e-30 Identity = 61/104 (58.65%), Postives = 81/104 (77.88%), Query Frame = -1 Query: 3 FRSPTMAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAY--NALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNE 308 F PTMA+ L + VSSA+DMSI+SYD+ H ++ R++ EVM ++EAW VKHGKA N+L EK++RFEIFKDNLRF+DEHN +N +Y++GL RFADLTN+ Sbjct: 3 FLKPTMAILFLAMVAVSSAVDMSIISYDEKHGVSTTGGRSEAEVMSIYEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTND 106
BLAST of CX308916 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.266e-22 Identity = 57/106 (53.77%), Postives = 80/106 (75.47%), Query Frame = -1 Query: 3 MGLFRSPTMAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNE 317 MGL +S ++M LLF T+ L +S+ +K+ + RT+DEV M+E+W +K+GK+YN+LGE E+RFEIFK+ LRFIDEHN++ NR+YKVGLN+FADLT+E Sbjct: 1 MGLPKS-FVSMSLLFFSTL---LILSLA-----FNAKNLTQRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDE 97
BLAST of CX308916 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4) HSP 1 Score: 103.605 bits (257), Expect = 3.266e-22 Identity = 57/106 (53.77%), Postives = 80/106 (75.47%), Query Frame = -1 Query: 3 MGLFRSPTMAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNE 317 MGL +S ++M LLF T+ L +S+ +K+ + RT+DEV M+E+W +K+GK+YN+LGE E+RFEIFK+ LRFIDEHN++ NR+YKVGLN+FADLT+E Sbjct: 1 MGLPKS-FVSMSLLFFSTL---LILSLA-----FNAKNLTQRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDE 97
BLAST of CX308916 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.893e-20 Identity = 53/109 (48.62%), Postives = 71/109 (65.14%), Query Frame = -1 Query: 9 MGLFRSPTMAMFLLFLFTVS--SALDMSIVSYDKTHESKSSSWRT----DDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLT 317 MG +S M +FLL L S +A+DMS+VS + H + R D E MFE+W VKHGK Y+++ EKE+R IF+DNLRFI N+EN +Y++GLNRFADL+ Sbjct: 1 MGYAKS-AMLIFLLALVIASCATAMDMSVVSSNDNHHVTAGPGRRQGIFDAEATLMFESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLS 108
BLAST of CX308916 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.736e-18 Identity = 47/97 (48.45%), Postives = 68/97 (70.10%), Query Frame = -1 Query: 3 AMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNS-ENRTYKVGLNRFADLTNE 290 A+ +L + +SS+L ++ +++ R + EV M+E W V++ K YN LGEKE+RF+IFKDNL+F+DEHNS +RT++VGL RFADLTNE Sbjct: 12 ALVILSVLLLSSSLGVA---------TETEIERNETEVRLMYEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNE 99
BLAST of CX308916 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 6.373e-18 Identity = 46/104 (44.23%), Postives = 67/104 (64.42%), Query Frame = -1 Query: 3 SPTMAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNE 302 S +A L L +A DMSIVSY + R+++E ++ W +HGK+YNA+GE+E+R+ F+DNLR+IDEHN+ ++++GLNRFADLTNE Sbjct: 4 SMALAAAALLLLLSLAAADMSIVSYGE---------RSEEEARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNE 98
BLAST of CX308916 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.324e-18 Identity = 45/104 (43.27%), Postives = 69/104 (66.35%), Query Frame = -1 Query: 9 MGLFRSPTMAMFL-LFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLT 317 MG +S + + + + + + ++A+DMS+VSYD + S D E +FE+W VKHGK Y ++ EKE+R IF+DNLRFI+ N+EN +Y++GL FADL+ Sbjct: 1 MGSAKSAMLILLVAMVIASCATAIDMSVVSYDDNNRLHSVF---DAEASLIFESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLS 101
BLAST of CX308916 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.854e-17 Identity = 42/82 (51.22%), Postives = 61/82 (74.39%), Query Frame = -1 Query: 9 LDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLT 251 L + ++S + + S R + EV+ M+E W V++GK YN LGEKE+RF+IFKDNL+ I+EHNS+ NR+Y+ GLN+F+DLT Sbjct: 13 LSVLLISISLGVVTATESQRNEGEVLTMYEQWLVENGKNYNGLGEKERRFKIFKDNLKRIEEHNSDPNRSYERGLNKFSDLT 94
BLAST of CX308916 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 9.203e-17 Identity = 43/103 (41.75%), Postives = 65/103 (63.11%), Query Frame = -1 Query: 3 MAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYN----ALGEKEKRFEIFKDNLRFIDEHNSENR--TYKVGLNRFADLTNE 293 +++ LL++ ++ D SI++ D WRTD+EV ++ W +HGK N + +++KRF IFKDNLRFID HN +N+ TYK+GL +F DLTN+ Sbjct: 8 LSLLLLYVVVSLASGDESIIN-DHLQLPSDGKWRTDEEVRSIYLQWSAEHGKTNNNNNGIINDQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTND 109
BLAST of CX308916 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.017e-15 Identity = 43/109 (39.45%), Postives = 67/109 (61.47%), Query Frame = -1 Query: 3 FRSPTMAMFLLFLFTVSSAL-------DMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNE 308 F +P+++ F L + +SAL D SIV Y H + + D+++ +FE+W +H KAY ++ EK RFE+F++NL ID+ N+E +Y +GLN FADLT+E Sbjct: 3 FSAPSLSKFSLLVAISASALLCCAFARDFSIVGYTPEHLTNT------DKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHE 105 The following BLAST results are available for this feature:
BLAST of CX308916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308916 ID=CX308916; Name=CX308916; organism=Citrus clementina; type=EST; length=383bpback to top |