CX308919

Overview
NameCX308919
Unique NameCX308919
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length486
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX308919 vs. ExPASy Swiss-Prot
Match: JMT_BRARP (Jasmonate O-methyltransferase OS=Brassica rapa subsp. pekinensis GN=JMT PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.415e-37
Identity = 80/165 (48.48%), Postives = 106/165 (64.24%), Query Frame = -1
Query:    1 SPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNW---NAYQNGFKFNKAVDAFNDGGYNVANCMRAVAEPLLVSQFGESIIDELFK 486
            SP      Y  QFQ DFS+FL+ RSEELV  GRMVL+FLGR S DP+++E CY WELLA AL ++  EG+IEEE ++ FN P Y  SP E+K  + KEGSF+ID LE+S V+W   +   + +   +        G  VA  +RAV EP+L   FG+ ++DELF+
Sbjct:  200 SPKSAHKVYALQFQTDFSVFLRSRSEELVPGGRMVLSFLGRSSPDPTTEESCYQWELLAQALMSLAKEGIIEEENIDAFNAPYYAASPEELKMAIEKEGSFSIDRLEISPVDWEGGSISDDSYDIVRFKPEALASGRRVAKTIRAVVEPMLEPTFGQKVMDELFE 364          
BLAST of CX308919 vs. ExPASy Swiss-Prot
Match: JMT_ARATH (Jasmonate O-methyltransferase OS=Arabidopsis thaliana GN=JMT PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 1.415e-37
Identity = 83/169 (49.11%), Postives = 110/169 (65.09%), Query Frame = -1
Query:    1 SPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGFKFNKAVDAF-------NDGGYNVANCMRAVAEPLLVSQFGESIIDELFK 486
            SP     AY  QFQ DF +FL+ RSEELV  GRMVL+FLGR+S DP+++E CY WELLA AL +M  EG+IEEEK++ FN P Y  S  E+K  + KEGSF+ID LE+S ++W   + G    ++ D            G  V+N +RAV EP+L   FGE+++DELF+
Sbjct:  196 SPKSAHKAYALQFQTDFLVFLRSRSEELVPGGRMVLSFLGRRSLDPTTEESCYQWELLAQALMSMAKEGIIEEEKIDAFNAPYYAASSEELKMVIEKEGSFSIDRLEISPIDW---EGGSISEESYDLVIRSKPEALASGRRVSNTIRAVVEPMLEPTFGENVMDELFE 361          
BLAST of CX308919 vs. ExPASy Swiss-Prot
Match: BAMT_ANTMA (Benzoate carboxyl methyltransferase OS=Antirrhinum majus GN=BAMT PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.912e-34
Identity = 77/164 (46.95%), Postives = 109/164 (66.46%), Query Frame = -1
Query:    4 SPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNA---YQNGFKFNKAVDAFNDGGYNVANCMRAVAEPLLVSQFGESIIDELF 486
            SPP V  AY +Q++RDFS FLK R EE+V  GRMVLTF GR  +DPSSK+   I+ LLA  L +MV+EGL++ + +  FNIP Y+P   E+++ ++ EGSFT+D LEV  V W+A     +  + + ++      G  VA+C+RA+ EP+L S FG +I+D LF
Sbjct:  173 SPPEVYKAYAKQYERDFSTFLKLRGEEIVPGGRMVLTFNGRSVEDPSSKDDLAIFTLLAKTLVDMVAEGLVKMDDLYSFNIPIYSPCTREVEAAILSEGSFTLDRLEVFRVCWDASDYTDDDDQQDPSIFGKQRSGKFVADCVRAITEPMLASHFGSTIMDLLF 336          
BLAST of CX308919 vs. ExPASy Swiss-Prot
Match: MT810_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g38100 OS=Arabidopsis thaliana GN=At5g38100 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.431e-13
Identity = 49/162 (30.25%), Postives = 78/162 (48.15%), Query Frame = -1
Query:    4 VLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECC---YIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSE--VNWNAYQNGFKFNKAVDAFNDGGYNVANCMRAVAEPLLVSQFGESIIDELF 474
            V  AY  QF +D  +FL  R+EELV  G M++  +G    D  S       Y+ + +   L +M   G+  EEK++ F++P Y P  +E+K E+ K GSFTI+ +E +   +      N F               + +  RA    ++   FG+ ++DELF
Sbjct:  185 VTKAYKVQFIKDMEIFLDARAEELVPGGLMIV--IGECLPDGVSLYETWQGYVMDTIGDCLMDMAKSGITSEEKIDLFSLPVYFPQFSELKGEIEKNGSFTIELMETTSHPLEGKPLTNDF---------------ITSTFRAFLTTIIEKHFGDGVVDELF 329          
BLAST of CX308919 vs. ExPASy Swiss-Prot
Match: MT878_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g38780 OS=Arabidopsis thaliana GN=At5g38780 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 9.236e-13
Identity = 48/161 (29.81%), Postives = 79/161 (49.07%), Query Frame = -1
Query:    1 VLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCY---IWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGFKFNKAVDAFNDGGYNVANCMRAVAEPLLVSQFGESIIDELFK 474
            V  AY  QF++D  +FLK R+EELV  G M+   LG+   D  +    +   + + +   L +M + G+  EEK+  FN+P Y P  +E+K  + +   FTI+ +E+      A Q    F             + +  RA+   ++   FG S++DELF+
Sbjct:  187 VTEAYKVQFEKDMGVFLKARAEELVPGGLMIT--LGQCLPDGVAMYETWSGIVKDTIGDCLQDMATLGVTTEEKIEMFNLPVYFPQVSELKGAIEQNIRFTIEMMEIVSHPLEAVQLSNNF-------------ITSMYRAILSTVIERHFGGSVVDELFR 332          
BLAST of CX308919 vs. ExPASy Swiss-Prot
Match: MT799_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g37990 OS=Arabidopsis thaliana GN=At5g37990 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 2.971e-11
Identity = 43/162 (26.54%), Postives = 82/162 (50.62%), Query Frame = -1
Query:    4 VLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCY---IWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE--VSEVNWNAYQNGFKFNKAVDAFNDGGYNVANCMRAVAEPLLVSQFGESIIDELF 474
            V  AY  QF++D   FL  R+EELV+ G M+L+  G+   D   K   +   + +++   L +M  +G+  +EK+  F++P Y P  +E K+E+ +  +F+I+ +E     +++    N F               + +  RA+   ++   FG+ +++ELF
Sbjct:  188 VTEAYRVQFKKDMGDFLGARAEELVSGGLMILS--GQCLPDGVPKALTWQGVVIDMIGDCLMDMAKQGITTKEKIELFSLPIYIPHISEFKAEIERNENFSIETMEKISHPMDYKPLTNDF---------------ITSMFRAILNTIIEEHFGDGVVNELF 332          
BLAST of CX308919 vs. ExPASy Swiss-Prot
Match: MT797_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g37970 OS=Arabidopsis thaliana GN=At5g37970 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.645e-11
Identity = 41/160 (25.62%), Postives = 80/160 (50.00%), Query Frame = -1
Query:    4 VLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCY---IWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGFKFNKAVDAFNDGGYNVANCMRAVAEPLLVSQFGESIIDELF 474
            V  AY  QF++DF  FL+ R+EELV+ G M+L+  G+   D   K   +   + +++   L ++   G+  +EK+  F++P Y P  +E K+ + +  +F ++ +E             + +  +D        + +  RA+   ++   FGE +++ELF
Sbjct:  188 VTKAYKIQFRKDFGGFLEARAEELVSGGLMILS--GQCLPDGIPKALTWQGVVIDMIGDCLMDLAKLGITSKEKIELFSLPTYIPHISEFKANIEQNENFNVETME-------------EISHPMDYMPLTNDFITSMFRAILNTIIEEHFGEGVVNELF 332          
The following BLAST results are available for this feature:
BLAST of CX308919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
JMT_BRARP1.415e-3748.48Jasmonate O-methyltransferase OS=Brassica rapa sub... [more]
JMT_ARATH1.415e-3749.11Jasmonate O-methyltransferase OS=Arabidopsis thali... [more]
BAMT_ANTMA1.912e-3446.95Benzoate carboxyl methyltransferase OS=Antirrhinum... [more]
MT810_ARATH2.431e-1330.25Probable S-adenosylmethionine-dependent methyltran... [more]
MT878_ARATH9.236e-1329.81Probable S-adenosylmethionine-dependent methyltran... [more]
MT799_ARATH2.971e-1126.54Probable S-adenosylmethionine-dependent methyltran... [more]
MT797_ARATH8.645e-1125.63Probable S-adenosylmethionine-dependent methyltran... [more]
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Properties
Property NameValue
Genbank descriptionC21005G09Rv AbsLeaSub1 Citrus clementina cDNA clone C21005G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308919 ID=CX308919; Name=CX308919; organism=Citrus clementina; type=EST; length=486bp
TTTAAACAGCTCATCAATGATTGATTCACCAAACTGACTAACAAGCAAGG
GCTCGGCCACAGCTCTCATGCAATTCGCAACGTTGTATCCTCCATCATTA
AATGCATCAACGGCCTTGTTAAACTTAAAACCATTCTGATAAGCGTTCCA
GTTAACTTCAGAAACCTCAAGGTGATCAATGGTGAAGGATCCCTCCTTTA
TAACCTCCGATTTTATTTCAGCTGGTGATGGTGTATACTGCGGAATGTTG
AAACAATTCACTTTCTCTTCTTCTATGAGTCCCTCGGAGACCATATTGTT
GAGAGCCGTGGCCAAGAGCTCCCAAATGTAGCAGCACTCTTTGCTTGAGG
GATCTTGGCTTTTTCTTCCTAGAAATGTTAAAACCATGCGCCCTTCTGCC
ACCAATTCCTCTGAGCGACACTTGAGAAACAATGAAAAATCTCTTTGAAA
TTGCTCGTAATATGCCGTAAGCACGCATGGCGGACT
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