CX309056

Overview
NameCX309056
Unique NameCX309056
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length458
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX309056 vs. ExPASy Swiss-Prot
Match: YIHQ_ECOLI (Alpha-glucosidase yihQ OS=Escherichia coli (strain K12) GN=yihQ PE=3 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 8.822e-17
Identity = 41/94 (43.62%), Postives = 56/94 (59.57%), Query Frame = 2 
Query:   23 DLVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVXXXXXXXXXYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTHE 304
            +++FFMRAG   S K+  + W GDQ V W  +DG+ S V          +  +HSDIGGY      L + +RS+ELLLRW + +AFT + RTHE
Sbjct:  449 EILFFMRAGSTGSQKYSTMMWAGDQNVDWSLDDGLASVVPAALSLAMTGHGLHHSDIGGYTT----LFEMKRSKELLLRWCDFSAFTPMMRTHE 538
The following BLAST results are available for this feature:
BLAST of CX309056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YIHQ_ECOLI8.822e-1743.62Alpha-glucosidase yihQ OS=Escherichia coli (strain... [more]
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Properties
Property NameValue
Genbank descriptionC21007H07Rv AbsLeaSub1 Citrus clementina cDNA clone C21007H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309056 ID=CX309056; Name=CX309056; organism=Citrus clementina; type=EST; length=458bp
AAAGAGGGAAGACACAGAAGAGGATTTGGTTTTTTTCATGAGGGCAGGTT
TTAGAGATAGTCCCAAATGGGGGATGCTGTTTTGGGAAGGAGACCAAATG
GTAAGTTGGCAAGCTAATGATGGGATAAAGAGTGCTGTTGTTGGCTTACT
GAGCAGTGGACTTTCTGGTTATGCTTTTAACCACAGTGATATTGGAGGTT
ACTGTGCAGTAAACTTACCTCTAATCAAATACAGAAGAAGTGAAGAGTTG
CTGTTGCGATGGATGGAGCTAAATGCTTTCACCACCGTTTTCCGGACCCA
TGAAGTAAGTTAAAAATTTCTTTCCAGAAATTCATATACCTCTTTCTCGC
CTTCTAACAGGAGGCTTCTCAGAAAGGTCTTCCTGTATGCCGTCACCTAT
TTCTCCACTACCCAGATGATGACAAGGTGCAGAGATTGAGTTACCAGCAG
TTTTTGGT
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