CX309064

Overview
NameCX309064
Unique NameCX309064
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length585
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX309064 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 8.880e-92
Identity = 164/194 (84.54%), Postives = 175/194 (90.21%), Query Frame = -2
Query:    3 LSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPLPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYH 584
            LSLACGSLMMLVSWATRIA+APKTDLEFWK+LFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRF  GET PLPVY+SLLPIIGGCALAA+TELNFN+ GFMGAMISNLAFVFRNIF            MNYYACLSMMSL+ILTPF+IAVE PQMWAAGWQ A++Q+GPNFVWWV AQS+FYH
Sbjct:  131 LSLACGSLMMLVSWATRIADAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFFMGETFPLPVYLSLLPIIGGCALAAITELNFNITGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMMSLVILTPFSIAVEVPQMWAAGWQNAVSQVGPNFVWWVVAQSVFYH 324          
BLAST of CX309064 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 9.510e-86
Identity = 154/194 (79.38%), Postives = 166/194 (85.57%), Query Frame = -2
Query:    3 LSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPLPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYH 584
            LSLA GSLMML+SWA  I E PKTD +FWK+LFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRF+ GET P  VY+SL+PIIGGCAL+A+TELNFNMIGFMGAMISNLAFVFRNIF            MNYYACLSM+SLLILTPFAIAVEGPQMW  GWQ A+A +GP FVWWV AQS+FYH
Sbjct:  131 LSLAAGSLMMLISWAVGIVETPKTDFDFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPTSVYLSLIPIIGGCALSALTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLLILTPFAIAVEGPQMWVDGWQTALATVGPQFVWWVVAQSVFYH 324          
BLAST of CX309064 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.291e-36
Identity = 81/198 (40.91%), Postives = 124/198 (62.63%), Query Frame = -2
Query:    3 LSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPLPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGP----NFVWWVAAQSIFYH 584
            + L  G +  LVSW+  + +    + +  K L PVAV H IGHV + VS + VAVSFTH IK+ EP F+   S+FL G+ +P+ +++SL P++ G A+A++TEL+FN +GF+ AMISN++F +R+IF             N YA +S+++L +  P AI VEGPQ+   G+  AIA++G     + ++WV    +FYH
Sbjct:  139 IHLFVGVVYCLVSWSVGLPKRAPVNSDILKVLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNASASQFLLGQPIPITLWLSLAPVVLGVAMASLTELSFNWLGFISAMISNISFTYRSIF--SKKAMTDMDSTNVYAYISIIALFVCLPPAIIVEGPQLLKHGFNDAIAKVGMTKFISDLFWV---GMFYH 331          
BLAST of CX309064 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.479e-35
Identity = 75/198 (37.88%), Postives = 124/198 (62.63%), Query Frame = -2
Query:    3 LSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPLPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIG----PNFVWWVAAQSIFYH 584
            + LA G +  LVSW   + +    D    K L PVAV H +GHV + VS + VAVSFTH +K+ EP F+   S+F+ G+++P+ +++SL P++ G ++A++TEL+FN +GF+ AMISN++F +R+I+             N YA +S+++L++  P A+ +EGP +   G+  AIA++G     + ++WV    +FYH
Sbjct:  134 IHLAVGVVYCLVSWTVGLPKRAPIDGNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIY--SKKAMTDMDSTNIYAYISIIALIVCIPPALIIEGPTLLKTGFNDAIAKVGLVKFVSDLFWV---GMFYH 326          
BLAST of CX309064 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.479e-35
Identity = 79/198 (39.90%), Postives = 122/198 (61.62%), Query Frame = -2
Query:    3 LSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPLPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGP----NFVWWVAAQSIFYH 584
            + LA G +  L  WA  + +    D    K L PVA  H +GHV + VS + VAVSFTH IKS EP F+   S+F+ G+++P+ +++SL P++ G ++A++TEL+FN +GF+ AMISN++F +R+I+             N YA +S++SLL   P AI +EGPQ+   G+  AIA++G     + ++WV    +FYH
Sbjct:  140 IHLAVGVVYCLGGWAVGLPKRAPMDSNLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKSLEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIY--SKKAMTDMDSTNLYAYISIISLLFCIPPAIILEGPQLLKHGFSDAIAKVGMTKFISDLFWV---GMFYH 332          
BLAST of CX309064 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.850e-35
Identity = 78/198 (39.39%), Postives = 124/198 (62.63%), Query Frame = -2
Query:    3 LSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPLPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIG-PNFV---WWVAAQSIFYH 584
            + L  G +  L SW+  + +    D +  K L PVAV H IGHV + VS + VAVSFTH IK+ EP F+   S+F+ G+++P+ +++SL P++ G ++A++TEL+FN +GF+ AMISN++F +R+++             N YA +S+++L +  P AI VEGPQ+   G+  AIA++G   F+   +WV    +FYH
Sbjct:  136 IHLFVGVVYCLASWSVGLPKRAPMDSKLLKLLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNVSFTYRSLY--SKKAMTDMDSTNIYAYISIIALFVCLPPAIIVEGPQLMKHGFNDAIAKVGLTKFISDLFWV---GMFYH 328          
BLAST of CX309064 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.441e-33
Identity = 76/195 (38.97%), Postives = 118/195 (60.51%), Query Frame = -2
Query:    3 LSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPLPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIG-PNFVWWVAAQSIFYH 584
            + LA G +  LVSW   + +    D    K L PVA  H +GHV + VS + V VSFTH +K+ EP F+   S+F+ G+ +PL +++SL P++ G ++A++TEL+FN +GF  AMISN++F +R+I+             N YA +S+++L+   P AI +EGPQ+   G+  AIA++G   FV  +    +FYH
Sbjct:  146 IHLAVGVVYCLVSWGVGLPKRAPIDSTQLKLLTPVAFCHALGHVTSNVSFAAVRVSFTHTVKALEPFFNAAASQFILGQQIPLALWLSLAPVVLGVSMASLTELSFNWLGFTSAMISNISFTYRSIY--SKKAMTDMDSTNVYAYISIIALIFCLPPAIFIEGPQLLQHGFNDAIAKVGLTKFVTDLFWVGMFYH 338          
BLAST of CX309064 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.441e-33
Identity = 75/198 (37.88%), Postives = 120/198 (60.61%), Query Frame = -2
Query:    3 LSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPLPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGP----NFVWWVAAQSIFYH 584
            + LA G +  L SW   + +    D    K L PV   H +GHV + VS + VAVSFTH IK+ EP F+   S+F+ G+++P+ +++SL P++ G ++A++TEL+FN +GF+ AMISN++F +R+I+             N YA +S+++LL   P A+  EGPQ+   G+  AIA++G     + ++WV    +FYH
Sbjct:  139 IHLAVGVVYCLGSWTVGLPKRAPVDSNILKLLIPVGFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPISLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIY--SKKAMTDMDSTNLYAYISIIALLFCIPPAVLFEGPQLLKHGFNDAIAKVGMIKFISDLFWV---GMFYH 331          
BLAST of CX309064 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 9.340e-33
Identity = 72/195 (36.92%), Postives = 119/195 (61.03%), Query Frame = -2
Query:    3 LSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPLPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIG-PNFVWWVAAQSIFYH 584
            + L  G +  L+SW+  + +    +    K LFPVA+ H IGH+ + VS + VAVSF H IK+ EP FS   ++F+ G+ +P  +++SL P++ G ++A++TEL+FN  GF+ AMISN++F +R+I+             N YA +S+++L++  P A+  EGP++   G+  AIA++G   FV  +    +FYH
Sbjct:  142 IHLVVGVVYCLISWSVGLPKRAPINGTLLKLLFPVALCHGIGHITSNVSFAAVAVSFAHTIKALEPFFSAAATQFILGQQVPFSLWLSLAPVVIGVSMASLTELSFNWTGFINAMISNISFTYRSIY--SKKAMTDMDSTNVYAYISIIALIVCIPPALIFEGPKLMQHGFSDAIAKVGLTKFVSDLFLVGLFYH 334          
BLAST of CX309064 vs. ExPASy Swiss-Prot
Match: TPT2_BRAOB (Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.488e-25
Identity = 63/166 (37.95%), Postives = 97/166 (58.43%), Query Frame = -2
Query:   96 LSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPLP-VYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXMN--YYACLSMMSLLILTPFAIAVEG 584
            +  A GS+++   WA  + + PK       ++ P+AV HT+G++   +S+ KV+VSFTH IK+ EP FSV++S    GE +P P V  S++PI+GG ALA+VTE++FN  GF+ AM SNL    RN+              N   ++ +++MSL ++ P     EG
Sbjct:  136 VQFAVGSVLITFMWALNLYKRPKISAAQLAAILPLAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVVLSAMFLGE-VPTPWVIGSIIPIVGGVALASVTEVSFNWAGFLSAMASNLTNQSRNVLSKKVMVKKDDSLDNITLFSIITLMSLFLMAPVTFFSEG 300          
The following BLAST results are available for this feature:
BLAST of CX309064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
GPT2_ARATH8.880e-9284.54Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
GPT1_ARATH9.510e-8679.38Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
TPT1_BRAOB5.291e-3640.91Triose phosphate/phosphate translocator, chloropla... [more]
TPT_PEA4.479e-3537.88Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLAPR4.479e-3539.90Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SPIOL5.850e-3539.39Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SOLTU1.441e-3338.97Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLATR1.441e-3337.88Triose phosphate/phosphate translocator, chloropla... [more]
TPT_MAIZE9.340e-3336.92Triose phosphate/phosphate translocator, chloropla... [more]
TPT2_BRAOB5.488e-2537.95Triose phosphate/phosphate translocator, non-green... [more]

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Properties
Property NameValue
Genbank descriptionC21008A09Rv AbsLeaSub1 Citrus clementina cDNA clone C21008A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309064 ID=CX309064; Name=CX309064; organism=Citrus clementina; type=EST; length=585bp
AAGTGATAGAAGATACTCTGTGCCGCTACCCACCACACAAAGTTGGGACC
AATTTGAGCAATAGCCTTTTGCCAGCCAGCAGCCCACATCTGAGGGCCCT
CCACAGCAATTGCAAATGGTGTGAGAATCAAAAGAGACATCATAGACAAA
CAAGCATAATAGTTCATCCCACCAACAGACTTTCCCTTCATCCCTTTCTT
GGAGAAAATGTTCCGAAACACGAATGCCAAATTCGATATCATAGCTCCCA
TAAATCCAATCATGTTGAAGTTGAGCTCTGTAACAGCAGCAAGGGCACAG
CCTCCAATAATCGGCAGGAGTGACATATAAACCGGCAAGGGAAGTGTCTC
ACCGAACAAGAACCTTGAAACCAATACACTGAATGCAGGCTCACCACTCT
TGATGATGTGGGTGAATGAAACTGCAACTTTTGACATACTTACGGTTGCT
GCTACATGCCCAATTGTATGTGCCACTGCAACAGGAAACAAACTCTTCCA
GAACTCAAGATCGGTTTTAGGGGCTTCAGCGATTCTGGTGGCCCAAGAAA
CCAACATCATGAGAGAGCCACAAGCCAGTGAAAGA
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