CX309117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309117 vs. ExPASy Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 6.276e-35 Identity = 70/76 (92.11%), Postives = 76/76 (100.00%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFGIF 230 +ID+KKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAA+MSAIYEE++DEDGFLYM+YSGENTFGIF Sbjct: 44 DIDRKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFGIF 119
BLAST of CX309117 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 6.276e-35 Identity = 70/75 (93.33%), Postives = 74/75 (98.67%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFGI 227 +IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKN LPPTAA+MSAIYEEN+DEDGFLYMTYSGENTFG+ Sbjct: 44 DIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGL 118
BLAST of CX309117 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 6.276e-35 Identity = 70/75 (93.33%), Postives = 74/75 (98.67%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFGI 227 +IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKN LPPTAA+MSAIYEEN+DEDGFLYMTYSGENTFG+ Sbjct: 44 DIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGL 118
BLAST of CX309117 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.071e-34 Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFGIF 230 +IDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIFIFVKN LPPTAA+MSAIYEEN+DEDGFLYMTYSGENTFG+F Sbjct: 44 DIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGLF 119
BLAST of CX309117 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 1.071e-34 Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFGIF 230 +IDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIFIFVKN LPPTAA+MSAIYEEN+DEDGFLYMTYSGENTFG+F Sbjct: 44 DIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGLF 119
BLAST of CX309117 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSJ (Autophagy-related protein 8A OS=Oryza sativa subsp. japonica GN=ATG8A PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.398e-34 Identity = 69/74 (93.24%), Postives = 73/74 (98.65%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIF+FVKN LPPTA++MSAIYEEN+DEDGFLYMTYSGENTFG Sbjct: 44 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CX309117 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSI (Autophagy-related protein 8A OS=Oryza sativa subsp. indica GN=ATG8A PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.398e-34 Identity = 69/74 (93.24%), Postives = 73/74 (98.65%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIF+FVKN LPPTA++MSAIYEEN+DEDGFLYMTYSGENTFG Sbjct: 44 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CX309117 vs. ExPASy Swiss-Prot
Match: ATG8C_ARATH (Autophagy-related protein 8c OS=Arabidopsis thaliana GN=ATG8C PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.184e-33 Identity = 68/74 (91.89%), Postives = 72/74 (97.30%), Query Frame = 3 Query: 6 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFGI 227 IDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIF+FVKN LPPTAAMMSAIY+EN+DEDGFLYMTYSGENTFG+ Sbjct: 45 IDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFGL 118
BLAST of CX309117 vs. ExPASy Swiss-Prot
Match: ATG8A_ARATH (Autophagy-related protein 8a OS=Arabidopsis thaliana GN=ATG8A PE=1 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 1.309e-32 Identity = 66/74 (89.19%), Postives = 71/74 (95.95%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224 +IDKKKYLVPADLTVGQFVYVVRKRIKL EKAIF+FVKN LPPTAA+MSAIYEE++DEDGFLYMTYSGENTFG Sbjct: 44 DIDKKKYLVPADLTVGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117
BLAST of CX309117 vs. ExPASy Swiss-Prot
Match: ATG8B_ARATH (Autophagy-related protein 8b OS=Arabidopsis thaliana GN=ATG8B PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.709e-32 Identity = 65/74 (87.84%), Postives = 71/74 (95.95%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224 +IDKKKYLVPADLT+GQFVYVVRKRIKL EKAIF+FVKN LPPTAA+MSAIYEE++DEDGFLYMTYSGENTFG Sbjct: 44 DIDKKKYLVPADLTIGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117 The following BLAST results are available for this feature:
BLAST of CX309117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309117 ID=CX309117; Name=CX309117; organism=Citrus clementina; type=EST; length=435bpback to top |