CX309298

Overview
NameCX309298
Unique NameCX309298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL46_ARATH (Beta-glucosidase 46 OS=Arabidopsis thaliana GN=BGLU46 PE=1 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 6.029e-56
Identity = 95/146 (65.07%), Postives = 118/146 (80.82%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNT 467
            +N +GI +YN LIDAL+ KGI PFVTL  FD PQE+E+++ +WLS E Q+DFGY ADICFK FGDRVK+W TINEPN  ++L+YR G  PPA CS P+GNC+ GNSE EPFIAAHN+IL+HA A+ IYRTKYQ++Q G IGI++ T
Sbjct:  124 INYKGIKYYNNLIDALIKKGITPFVTLNHFDYPQELENRFKSWLSSEMQKDFGYLADICFKHFGDRVKHWITINEPNQHISLAYRSGLFPPARCSMPYGNCTHGNSETEPFIAAHNMILAHAKAIQIYRTKYQREQKGIIGIVVQT 269          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL45_ARATH (Beta-glucosidase 45 OS=Arabidopsis thaliana GN=BGLU45 PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 8.706e-55
Identity = 94/147 (63.95%), Postives = 119/147 (80.95%), Query Frame = 3
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNT 467
            ++N  GI +YN  IDAL+ +GI+PFVTL   D PQE+ED++ +WL+PE Q++FGY ADICFK FG+RVKYW T+NEPN Q+ L Y  G  PP+ CS P+GNCSQGNSE EPFIAAHN+IL+HA AV+IY+TKYQK+Q GSIGI++ T
Sbjct:  126 EINYLGIKYYNIFIDALISRGIKPFVTLNHVDYPQELEDRFQSWLNPEMQKEFGYLADICFKHFGNRVKYWTTLNEPNQQLILGYLTGKFPPSRCSSPYGNCSQGNSETEPFIAAHNMILAHAKAVNIYKTKYQKEQKGSIGIVVQT 272          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL18_ORYSJ (Beta-glucosidase 18 OS=Oryza sativa subsp. japonica GN=BGLU18 PE=2 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 2.144e-53
Identity = 93/145 (64.14%), Postives = 118/145 (81.38%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQ-GNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            VN  GI+ YNKLID++LLKGIQPFVTLT +D PQE+ED+YGAWL+ E Q DFG+FAD+CF +FGDRVKYW T NEPN+ V   Y LG +PP+ CS PFG+C++ G+S  EP++AAHN+ILSHATA++IY+ KYQ  Q G IG++L
Sbjct:  120 VNPAGIDFYNKLIDSILLKGIQPFVTLTHYDIPQELEDRYGAWLNAEIQSDFGHFADVCFGAFGDRVKYWTTFNEPNVAVRHGYMLGTYPPSRCSPPFGHCARGGDSHAEPYVAAHNVILSHATAIEIYKRKYQSKQRGMIGMVL 264          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL47_ARATH (Beta-glucosidase 47 OS=Arabidopsis thaliana GN=BGLU47 PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 4.777e-53
Identity = 89/147 (60.54%), Postives = 120/147 (81.63%), Query Frame = 3
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNT 467
            DVN  GI+HYN++I+ +L  GI+PFVTLT +D PQE+E +YG+WL+P+ +EDF ++A+ICF+ FGDRVK+W T NEPN+QV L YR G +PP+ CS+PFGNCS G+S  EP +AAHN+ILSH  AV++YRTK+Q+ Q G IGI++NT
Sbjct:  146 DVNMGGIDHYNRMINDILKTGIEPFVTLTHYDIPQELEYRYGSWLNPQIREDFEHYANICFRHFGDRVKFWSTFNEPNVQVILGYRTGTYPPSRCSKPFGNCSCGDSYIEPLVAAHNIILSHLAAVNLYRTKFQEQQRGQIGIVMNT 292          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL14_ORYSJ (Probable inactive beta-glucosidase 14 OS=Oryza sativa subsp. japonica GN=BGLU14 PE=2 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 1.699e-50
Identity = 84/146 (57.53%), Postives = 109/146 (74.66%), Query Frame = 3
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            DVN +G+  YN LID L+ KGIQPFVT+  +D P E++++YG WLSPE Q+DF YFA++CFK FGDR+K+W T N+PN+ +  SY  G + P  CS+PFG C+ GNS  EP++A HN+ILSHA AV +YR KYQ  QGG IGI L+
Sbjct:  116 DVNPDGVAFYNALIDGLVQKGIQPFVTICHYDIPHELDERYGGWLSPEIQKDFSYFAEVCFKLFGDRIKFWTTFNQPNLSIKFSYMDGFYSPGRCSEPFGKCALGNSSIEPYVAGHNIILSHANAVSVYRNKYQGKQGGQIGIALS 261          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL17_ORYSJ (Putative beta-glucosidase 17 OS=Oryza sativa subsp. japonica GN=BGLU17 PE=2 SV=3)

HSP 1 Score: 195.667 bits (496), Expect = 8.432e-50
Identity = 86/144 (59.72%), Postives = 109/144 (75.69%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            VNS GI  YN+LIDALL KGIQPFVTL  FD PQE+E +YG WL    +E+FGY++D+CFK+FGDRV++W T NEPN+     + LG +PP  CS PFG+C+ G+S  EP+ AAHN++LSHA AV  Y+T YQ  QGGSIGI++
Sbjct:  121 VNSAGIAFYNRLIDALLQKGIQPFVTLNHFDIPQELEIRYGGWLGAGIREEFGYYSDVCFKAFGDRVRFWTTFNEPNLITKFQFMLGAYPPNRCSPPFGSCNSGDSRREPYTAAHNILLSHAAAVHNYKTNYQAKQGGSIGIVV 264          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL16_ORYSJ (Beta-glucosidase 16 OS=Oryza sativa subsp. japonica GN=BGLU16 PE=2 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 7.138e-49
Identity = 86/144 (59.72%), Postives = 106/144 (73.61%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            VNS GI  YN+LI+ALL KGIQPFVTL  FD P E+E +YG WL    +E+F Y++D+CF +FGDRV++W T NEPN+     Y LG  PP HCS PFGNCS G+S  EP+ AAHN++LSHA AV  Y+T YQ  QGGSIGI++
Sbjct:  122 VNSAGIAFYNRLINALLQKGIQPFVTLNHFDIPHELETRYGGWLGAAIREEFEYYSDVCFNAFGDRVRFWTTFNEPNLSTRHQYILGEFPPNHCSPPFGNCSSGDSRREPYAAAHNILLSHAAAVHNYKTNYQAKQGGSIGIVI 265          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL32_ORYSJ (Beta-glucosidase 32 OS=Oryza sativa subsp. japonica GN=BGLU32 PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 1.540e-43
Identity = 79/146 (54.11%), Postives = 106/146 (72.60%), Query Frame = 3
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            ++N +G+ +YN LID L++ GIQP VT+  FD PQ ++D+YG  LSP   ED+  +A++CFK+FGDRVK+W T+NEPN++    Y  G  PP  CS PFG NC+ G+S  EP+I AH+L+L+HA+AV IYR KYQ  QGG IGI L
Sbjct:  121 EINPKGLEYYNNLIDELIMHGIQPHVTIYHFDLPQALQDEYGGILSPRFIEDYTAYAEVCFKNFGDRVKHWVTVNEPNIEPIGGYDAGVQPPRRCSYPFGTNCTGGDSSTEPYIVAHHLLLAHASAVSIYRQKYQAIQGGQIGITL 266          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL33_ORYSJ (Probable inactive beta-glucosidase 33 OS=Oryza sativa subsp. japonica GN=BGLU33 PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 2.905e-42
Identity = 77/146 (52.74%), Postives = 105/146 (71.92%), Query Frame = 3
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            ++N +G+ +YN LID L++ GIQP VT+  FD PQ ++D+YG  LSP   ED+  +A++CFK+FGDRVK+W T N+PN++    +  G  PP  CS PFG NC+ G+S  EP+I AH+L+L+HA+AV IYR KYQ  QGG IGI L
Sbjct:  121 EINPKGLEYYNNLIDELIMHGIQPHVTIYHFDLPQALQDEYGGILSPRFIEDYSAYAEVCFKNFGDRVKHWATFNQPNIEPIGGFDAGDRPPRRCSYPFGTNCTGGDSSTEPYIVAHHLLLAHASAVSIYRQKYQAIQGGQIGITL 266          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL31_ORYSJ (Beta-glucosidase 31 OS=Oryza sativa subsp. japonica GN=BGLU31 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 6.471e-42
Identity = 79/146 (54.11%), Postives = 102/146 (69.86%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG--NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            VN +G+ +YN LID LL  GIQP VT+  FD PQ ++D+Y   LSP   EDF  +AD+CFK+FGDRVK+W T+NEPN++    Y  G  PP  CS PFG  +C  GNS  EP+I AH+L+L+H++AV +YR KYQ  QGG IG+ L
Sbjct:  121 VNPKGLEYYNNLIDELLSHGIQPHVTIYHFDFPQALQDEYNGILSPRFVEDFTAYADVCFKNFGDRVKHWSTVNEPNIEPIGGYDQGILPPRRCSFPFGVLSCDNGNSTTEPYIVAHHLLLAHSSAVSLYREKYQATQGGQIGLTL 266          
The following BLAST results are available for this feature:
BLAST of CX309298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
BGL46_ARATH6.029e-5665.07Beta-glucosidase 46 OS=Arabidopsis thaliana GN=BGL... [more]
BGL45_ARATH8.706e-5563.95Beta-glucosidase 45 OS=Arabidopsis thaliana GN=BGL... [more]
BGL18_ORYSJ2.144e-5364.14Beta-glucosidase 18 OS=Oryza sativa subsp. japonic... [more]
BGL47_ARATH4.777e-5360.54Beta-glucosidase 47 OS=Arabidopsis thaliana GN=BGL... [more]
BGL14_ORYSJ1.699e-5057.53Probable inactive beta-glucosidase 14 OS=Oryza sat... [more]
BGL17_ORYSJ8.432e-5059.72Putative beta-glucosidase 17 OS=Oryza sativa subsp... [more]
BGL16_ORYSJ7.138e-4959.72Beta-glucosidase 16 OS=Oryza sativa subsp. japonic... [more]
BGL32_ORYSJ1.540e-4354.11Beta-glucosidase 32 OS=Oryza sativa subsp. japonic... [more]
BGL33_ORYSJ2.905e-4252.74Probable inactive beta-glucosidase 33 OS=Oryza sat... [more]
BGL31_ORYSJ6.471e-4254.11Beta-glucosidase 31 OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionC20002C09SK OF2 Citrus clementina cDNA clone C20002C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309298 ID=CX309298; Name=CX309298; organism=Citrus clementina; type=EST; length=467bp
CNNNNNNNNNNNNNNNNNNNNNNNGGGACGTCAATTCAGAGGGTATTAAC
CACTACAACAAGCTCATTGATGCCCTCTTACTGAAAGGGATCCAGCCATT
TGTGACACTGACTCAATTTGATAGTCCTCAAGAAATTGAAGACAAATACG
GAGCCTGGCTAAGCCCTGAATCACAGGAGGATTTTGGATATTTTGCAGAC
ATTTGTTTTAAATCTTTCGGAGACCGAGTGAAATACTGGTTCACCATCAA
TGAGCCAAATATGCAGGTTACCCTTAGTTATCGTTTAGGCTGCCATCCCC
CAGCTCATTGCTCGCAGCCATTTGGAAATTGCAGTCAGGGCAATTCAGAG
GAGGAGCCTTTTATAGCAGCTCACAATCTCATCTTATCGCATGCAACTGC
AGTTGATATATACCGAACCAAATACCAGAAAGATCAAGGAGGCAGCATTG
GCATTATCTTAAACACA
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