CX309309
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309309 vs. ExPASy Swiss-Prot
Match: YQL5_SCHPO (Uncharacterized RNA-binding protein C1827.05c OS=Schizosaccharomyces pombe GN=SPCC1827.05c PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.280e-32 Identity = 70/178 (39.33%), Postives = 111/178 (62.36%), Query Frame = 3 Query: 180 RKLTEEKPLVNKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFNPRYKPVDRVQVERKLQNKERTLEEHKKLVEKILKRDQKRRKRIEAAGIEYEC----PEIVGNVMPAPKRSSSMK 701 +K++E K L K VLY+GR+PHGFYEK+M+ +FSQFG + RLR++RN+ TG SKH+ FIEF +VA VVA+ MH YLL+ +LQ +IP + VH +++G + +K + + R K + E+ KL+ + ++ + ++++++ GI E P+ V A K+SS K Sbjct: 92 KKVSENKNLQKKKGVLYVGRLPHGFYEKQMRMYFSQFGPVLRLRMSRNRKTGSSKHYAFIEFESLDVANVVAETMHNYLLYGKLLQCKVIPEDQVHENMFKGADVPFKRIPHATIARLQHEKPLSKEKADKLITRHNRKLKLKKRKLKELGITLESDVSHPKAASPV--ASKKSSKKK 267
BLAST of CX309309 vs. ExPASy Swiss-Prot
Match: MK67I_DANRE (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Danio rerio GN=mki67ip PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.793e-30 Identity = 69/166 (41.57%), Postives = 103/166 (62.05%), Query Frame = 3 Query: 222 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGF-----NPRYKPVDRVQVERKLQNKERTLEEHKKLVEKILKRDQKRRKRIEAAGIEYECPEIVGNVMPAPKRSSSMKV 704 VLY+G +P G +E +++++F QFG + RLR++R+K TG SK +GF+EF EVA++VA+ M+ YL+ E I++ H+IPPE VH KL+ G P+Y V R NK T ++ KK+ K+L ++ K RKR+ A GI+Y+ P + PA K S V Sbjct: 46 VLYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIVAETMNNYLMGERIIKCHVIPPEKVHEKLFVGSIAGFKKPKYPAVTR-------YNKTHTEDDVKKVGTKLLSKESKLRKRLAAKGIDYDFPGFAAQI-PAKKAPSEANV 203
BLAST of CX309309 vs. ExPASy Swiss-Prot
Match: MK67I_XENTR (MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus tropicalis GN=mki67ipl PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.814e-30 Identity = 60/143 (41.96%), Postives = 94/143 (65.73%), Query Frame = 3 Query: 222 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFNPRYKPVDRVQVERKLQNKERTLEEHKKLVEKILKRDQKRRKRIEAAGIEYECP 650 V+YIG IP YE +++ +FSQFG + RLR++R+K TG SK + ++EF EVA++VAD M+ YL E +L+ +PPE VHP+L+ G +++ + V R NK R+ E KK+ +++L ++ K RKR+ GI+Y+ P Sbjct: 42 VIYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDEVAKIVADTMNNYLFCERLLKCEFVPPEKVHPRLFIGCTAKFRKPTKPAVSR--YNKRRSEAEQKKMTQRMLSKENKVRKRLAEKGIDYDFP 182
BLAST of CX309309 vs. ExPASy Swiss-Prot
Match: MK67I_XENLA (MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus laevis GN=mki67ipl PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.863e-28 Identity = 58/143 (40.56%), Postives = 93/143 (65.03%), Query Frame = 3 Query: 222 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFNPRYKPVDRVQVERKLQNKERTLEEHKKLVEKILKRDQKRRKRIEAAGIEYECP 650 V+YIG IP E ++Q +F+QFG + RLR++R+K TG SK + ++E+ EVA++VAD M+ YL E +L+ + PE VHP+L+ G N R++ + V R N +R EE KK+ ++++ ++ K RKR+ GI+Y+ P Sbjct: 42 VIYIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEYECDEVAKIVADTMNNYLFCERLLKCEFVTPEKVHPRLFIGCNTRFRKPTKPAVTR--YNSKRNKEEVKKMTQRMISKEYKLRKRLAEKGIDYDFP 182
BLAST of CX309309 vs. ExPASy Swiss-Prot
Match: MK67I_BOVIN (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Bos taurus GN=MKI67IP PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.424e-27 Identity = 57/146 (39.04%), Postives = 95/146 (65.07%), Query Frame = 3 Query: 222 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFNPRYKPVDRVQVERKLQNKERTLEEHKKLVEKILKRDQKRRKRIEAAGIEYECPEIV 659 V+Y+G +P YE +++A+FSQFG + R R++R+K TG SK +GF+EF +VA++ A+ M+ YL E +L+ H IPPE VH +L+R ++ +K V+R N+ R+L + ++ E+ K+++ RKR+ GI+Y P +V Sbjct: 46 VIYVGHLPPTLYETQIRAYFSQFGTVTRFRLSRSKKTGNSKGYGFVEFESEDVAKIAAETMNNYLFGERLLKCHFIPPEKVHEELFREWHMPFKRPSYPAVKR--YNQNRSLVQKLRMEERFKKKEKLLRKRLAKKGIDYNFPSLV 189
BLAST of CX309309 vs. ExPASy Swiss-Prot
Match: MK67I_HUMAN (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Homo sapiens GN=MKI67IP PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.600e-25 Identity = 52/146 (35.62%), Postives = 94/146 (64.38%), Query Frame = 3 Query: 222 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFNPRYKPVDRVQVERKLQNKERTLEEHKKLVEKILKRDQKRRKRIEAAGIEYECPEIV 659 V+Y+ +P+ E ++ ++FSQFG + R R++R+K TG SK + F+EF +VA++VA+ M+ YL E +L+ H +PPE VH +L++ +N +K V+R N+ RTL + ++ E+ K+++ RK++ GI+Y+ P ++ Sbjct: 46 VVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETMNNYLFGERLLECHFMPPEKVHKELFKDWNIPFKQPSYPSVKR--YNRNRTLTQKLRMEERFKKKERLLRKKLAKKGIDYDFPSLI 189
BLAST of CX309309 vs. ExPASy Swiss-Prot
Match: NOP15_YEAST (Ribosome biogenesis protein 15 OS=Saccharomyces cerevisiae GN=NOP15 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.587e-24 Identity = 56/155 (36.13%), Postives = 97/155 (62.58%), Query Frame = 3 Query: 180 RKLTEEKPLVNKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFNPRYKPVDRVQVERKLQNKERTLEEHKKLVEKILKRDQKRRKRIEAAGIEYE 644 +K ++K L + ++Y+ R+PHGF+EKE+ +F+QFG +K +R+ARNK TG S+H+GF+EF + E A + ++M+ YLL H+LQV ++P KL YK RV VE+ + + L+++ K ++ ++R K++ +GIE++ Sbjct: 78 KKSKDKKTLEEYSGIIYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESMNNYLLMGHLLQVRVLPKGAKIEKL-------YKYKKRVLVEKGITKPVKQLKDNMK------QKHEERIKKLAKSGIEFK 219
BLAST of CX309309 vs. ExPASy Swiss-Prot
Match: MK67I_RAT (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Rattus norvegicus GN=Mki67ip PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.895e-20 Identity = 55/172 (31.98%), Postives = 94/172 (54.65%), Query Frame = 3 Query: 180 RKLTEEKPLVNKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFNPRYKPVDRVQVERKLQNKERTLEEHKKLVEKILKRDQKRRKRIEAAGIEYECPEIVGNVMPAPKRSSS 695 R+ ++K + V+Y+G +P E + + +QFG I+R R++R+K TG S+ F F+EF +VA++VA+ M YL E +L +P E VH L+ N + P V+R N++R + K+ + K+++ RK++ GI+Y P + V+P PK+ S Sbjct: 31 RRAKKKKEEKLNSGVVYLGHLPSTLSESHIYDYCAQFGDIRRFRLSRSKRTGNSRGFAFVEFESEDVAKIVAETMDNYLFGERLLSCKFMPREKVHKDLFNQCNVPFHPPSFPAVKR--YNQKRGHLQMLKMEYRFKKKEKLLRKKLAKKGIDYSFPSL---VLPKPKKEIS 197
BLAST of CX309309 vs. ExPASy Swiss-Prot
Match: MK67I_MOUSE (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Mus musculus GN=Mki67ip PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.206e-18 Identity = 54/174 (31.03%), Postives = 95/174 (54.60%), Query Frame = 3 Query: 162 LEGGPGRKLTEEKPLVNKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFNPRYKPVDRVQVERKLQNKERTLEEHKKLVEKILKRDQKRRKRIEAAGIEYECPEIVGNVMPAPK 683 ++G + ++K +N+ V+Y+G +P E + + +QFG I R R++R+K TG SK + F+EF +VA++VA+ M YL E +L +P + VH L+ N + V+R N++R + K+ + K+++ RK++ A GI+Y P + V+P PK Sbjct: 29 IQGRTKKPQQKKKEKLNRG-VVYLGHLPSTLSESHIYNYCAQFGDISRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETMDNYLFGERLLSCKFMPRKKVHKDLFSQRNALFHRPSFPAVKR--YNRKRGHLQMLKMEYRFKKKEKLLRKKLAAKGIDYSFPSL---VLPKPK 196 The following BLAST results are available for this feature:
BLAST of CX309309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX309309 ID=CX309309; Name=CX309309; organism=Citrus clementina; type=EST; length=741bpback to top |