DY256910

Overview
NameDY256910
Unique NameDY256910
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1065
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256910 vs. ExPASy Swiss-Prot
Match: VP322_ARATH (Vacuolar protein sorting-associated protein 32 homolog 2 OS=Arabidopsis thaliana GN=VPS32.2 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.907e-51
Identity = 106/148 (71.62%), Postives = 115/148 (77.70%), Query Frame = 1
Query:  178 MFTRLFGKPKQETNALTTLDXXXXXXXXXXXXXXXXXXXXXXXXXXAKDYSKAKNKRAAIQCLKRKRLYKQQIKHLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEIDEQTENMKQIQEALSTPIG 621
            M  RLFGKPKQE NAL TLD                          AK+YS+AKNKRAAIQCLKRKRLY+ Q++ LGNFQLRIHDQMIMLEGAKATTETVDALR+GAS MKAMQKATNIDDVDKTMDEI+EQTENMKQIQEAL+TP+G
Sbjct:    1 MMNRLFGKPKQEANALQTLDKLNETLEMLEKKEKVLLKKAGAEVEKAKEYSRAKNKRAAIQCLKRKRLYEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALATPMG 148          
BLAST of DY256910 vs. ExPASy Swiss-Prot
Match: VP321_ARATH (Vacuolar protein sorting-associated protein 32 homolog 1 OS=Arabidopsis thaliana GN=VPS32.1 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 7.247e-51
Identity = 105/145 (72.41%), Postives = 113/145 (77.93%), Query Frame = 1
Query:  187 RLFGKPKQETNALTTLDXXXXXXXXXXXXXXXXXXXXXXXXXXAKDYSKAKNKRAAIQCLKRKRLYKQQIKHLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEIDEQTENMKQIQEALSTPIG 621
            RLFGKPKQET+ L TLD                          AK++S+AKNKRAAIQCLKRKRLY+QQ++ LGNFQLRIHDQMIMLEGAKATTETVDALRTGAS MKAMQKATNIDDVDKTMDEI+EQTENMKQIQEALS P G
Sbjct:    5 RLFGKPKQETSTLQTLDKLNETLEMLEKKENVLLKKATGEVEKAKEFSRAKNKRAAIQCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSAPFG 149          
BLAST of DY256910 vs. ExPASy Swiss-Prot
Match: SNF7_KLULA (Vacuolar-sorting protein SNF7 OS=Kluyveromyces lactis GN=SNF7 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.887e-12
Identity = 40/101 (39.60%), Postives = 60/101 (59.41%), Query Frame = 1
Query:  316 AKDYSKAKNKRAAIQCLKRKRLYKQQIKHLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEIDEQTENMKQIQEALSTPI 618
            AK   ++ NK  A   LK+K+LY+ Q+  L +    +  Q+  +E A    ET+ A++ GAS MK + K  ++D VD TMDEI EQ E  ++I EA+S P+
Sbjct:   48 AKKSLQSGNKNNAKTYLKKKKLYESQLDKLQSQIDSLDQQLYSIENANLNLETLKAMKQGASAMKNIHKGLDLDKVDDTMDEIREQVELNQEISEAISKPL 148          
BLAST of DY256910 vs. ExPASy Swiss-Prot
Match: SNF7_CANAL (Vacuolar-sorting protein SNF7 OS=Candida albicans GN=SNF7 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.660e-12
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = 1
Query:  316 AKDYSKAKNKRAAIQCLKRKRLYKQQIKHLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEIDEQTENMKQIQEALSTPIG 621
            A+ Y  +K    A   LKRK+ Y+  +  + N    +  Q+I +EGA    ET+ A++ GA  MK +    ++D V+ TMDEI EQ E   +I EA+S P+G
Sbjct:   49 ARKYVSSKQTTLAKSALKRKKGYESNLLKVENQIETLETQLISIEGANLNLETMKAMKQGAKAMKQIHGEYDVDKVEDTMDEIREQVELADEISEAISRPVG 150          
BLAST of DY256910 vs. ExPASy Swiss-Prot
Match: CHM4B_DANRE (Charged multivesicular body protein 4b OS=Danio rerio GN=chmp4b PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.520e-11
Identity = 38/95 (40.00%), Postives = 54/95 (56.84%), Query Frame = 1
Query:  337 KNKRAAIQCLKRKRLYKQQIKHLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEIDEQTENMKQIQEALSTPIG 621
            KNKRAA+Q LKRK+ Y++Q+  +      I  Q   LE A   TE +  +   A  MKA     +ID VD+ M +I EQ E  ++I +A+S P+G
Sbjct:   58 KNKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENAHTNTEVIKNMGYAAKAMKAAHDNMDIDKVDELMQDIIEQQELAQEISDAISKPVG 152          
BLAST of DY256910 vs. ExPASy Swiss-Prot
Match: SNF7_SCHPO (Vacuolar-sorting protein snf7 OS=Schizosaccharomyces pombe GN=snf7 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.291e-11
Identity = 32/94 (34.04%), Postives = 57/94 (60.64%), Query Frame = 1
Query:  340 NKRAAIQCLKRKRLYKQQIKHLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEIDEQTENMKQIQEALSTPIG 621
            NKR A+  LKRK++++ ++  +   +  I  Q+  ++ A    ET+ A+R GA  MK++Q+  + D VD+ MD+I +Q    ++I   +STP+G
Sbjct:   56 NKRLALTALKRKKMHENELVKIEGSRNNIEQQLFSIQNANLNFETLQAMRQGAEAMKSIQRGMDADKVDQIMDKIRDQQTISEEISTMISTPVG 149          
BLAST of DY256910 vs. ExPASy Swiss-Prot
Match: SNF7_CANGA (Vacuolar-sorting protein SNF7 OS=Candida glabrata GN=SNF7 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.291e-11
Identity = 36/101 (35.64%), Postives = 59/101 (58.42%), Query Frame = 1
Query:  316 AKDYSKAKNKRAAIQCLKRKRLYKQQIKHLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEIDEQTENMKQIQEALSTPI 618
            A+ +    NK  A   LK+K++Y+ Q+  L +    +  Q+  +E A    ET+ A++ GA  MK++    +ID VD+TMDEI EQ E  ++I +A+S P+
Sbjct:   49 ARKFLTRGNKTMAKNALKKKKVYEGQLVKLESQMDSLEQQLFSIESANLNLETMRAMKQGAKAMKSIHSGLDIDRVDETMDEIREQVELGEEISDAISRPL 149          
BLAST of DY256910 vs. ExPASy Swiss-Prot
Match: SNF7_ASHGO (Vacuolar-sorting protein SNF7 OS=Ashbya gossypii GN=SNF7 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.613e-11
Identity = 35/101 (34.65%), Postives = 59/101 (58.42%), Query Frame = 1
Query:  316 AKDYSKAKNKRAAIQCLKRKRLYKQQIKHLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEIDEQTENMKQIQEALSTPI 618
            A+ +    NK  A   LKRK++++ Q+  +      +  Q+  +E A    ET+ A++ GAS MK + +  +++ VD+TMDEI EQ E  ++I EA+S P+
Sbjct:   50 ARHFLSKGNKNMAKAALKRKKVFESQLLKIDKQVDSLEQQLYSIENANLNLETMKAMKQGASAMKHIHEGLDVERVDETMDEIREQVELGEEISEAISRPL 150          
BLAST of DY256910 vs. ExPASy Swiss-Prot
Match: CHMP5_XENTR (Charged multivesicular body protein 5 OS=Xenopus tropicalis GN=chmp5 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.613e-11
Identity = 35/98 (35.71%), Postives = 54/98 (55.10%), Query Frame = 1
Query:  328 SKAKNKRAAIQCLKRKRLYKQQIKHLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEIDEQTENMKQIQEALSTPIG 621
            SK   K+ A++ LK+KR+Y+QQ  +L      +      ++  K T  TVDA++ GA  MK   K   ID ++   D++++  EN  +IQEALS   G
Sbjct:   57 SKNMVKQKALRVLKQKRMYEQQRDNLNQQSFNMEQTNYAIQSLKDTKTTVDAMKVGAKEMKKAYKQVKIDQIEDLQDQLEDMMENANEIQEALSRSYG 154          
BLAST of DY256910 vs. ExPASy Swiss-Prot
Match: CHM4C_DANRE (Charged multivesicular body protein 4c OS=Danio rerio GN=chmp4c PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.613e-11
Identity = 37/95 (38.95%), Postives = 53/95 (55.79%), Query Frame = 1
Query:  337 KNKRAAIQCLKRKRLYKQQIKHLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEIDEQTENMKQIQEALSTPIG 621
            KNKRAA+Q LKRK+ Y++Q+  +      I  Q   LE A   TE +  +   A  MK   +  +ID VD  M +I EQ E  ++I +A+S P+G
Sbjct:   58 KNKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKTAHENMDIDKVDDLMQDITEQQELAQEISDAISRPVG 152          
The following BLAST results are available for this feature:
BLAST of DY256910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
VP322_ARATH1.907e-5171.62Vacuolar protein sorting-associated protein 32 hom... [more]
VP321_ARATH7.247e-5172.41Vacuolar protein sorting-associated protein 32 hom... [more]
SNF7_KLULA3.887e-1239.60Vacuolar-sorting protein SNF7 OS=Kluyveromyces lac... [more]
SNF7_CANAL8.660e-1237.25Vacuolar-sorting protein SNF7 OS=Candida albicans ... [more]
CHM4B_DANRE2.520e-1140.00Charged multivesicular body protein 4b OS=Danio re... [more]
SNF7_SCHPO3.291e-1134.04Vacuolar-sorting protein snf7 OS=Schizosaccharomyc... [more]
SNF7_CANGA3.291e-1135.64Vacuolar-sorting protein SNF7 OS=Candida glabrata ... [more]
SNF7_ASHGO5.613e-1134.65Vacuolar-sorting protein SNF7 OS=Ashbya gossypii G... [more]
CHMP5_XENTR5.613e-1135.71Charged multivesicular body protein 5 OS=Xenopus t... [more]
CHM4C_DANRE5.613e-1138.95Charged multivesicular body protein 4c OS=Danio re... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2DF02ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256910 ID=DY256910; Name=DY256910; organism=Citrus clementina; type=EST; length=1065bp
GGGCTTAAGATAATCGCAGATCGAACCACGCTCTCTCCCTCTCATATAAT
TCACAGATCTCTACCGATTGTATCTTTTAATAAAGTCAGAATCCCAATTC
TCGTTTTTTTTTTTCCCTCATTTTTATAATTACGGAGGTAAAATCGAGGG
TTTTTGATTAATCGCGGAAAATCAAACATGTTTACTCGGCTTTTTGGAAA
ACCTAAACAGGAAACCAATGCCTTAACCACGCTCGATAAGCTAAATGAAA
CTCTTGAAATGCTAAAGAAAAAGGAGGAAGTACTCCTGAAAAAGGCTTCT
GTAGAGGTTGAAAAGGCCAAGGACTACTCCAAAGCAAAGAACAAAAGAGC
GGCCATACAATGTTTGAAGAGGAAGAGGCTATACAAACAGCAAATAAAGC
ACCTTGGGAATTTCCAATTGCGCATTCATGATCAAATGATAATGCTAGAG
GGTGCTAAAGCCACAACTGAAACTGTAGATGCATTGAGGACGGGAGCATC
AACAATGAAGGCTATGCAGAAAGCAACGAACATAGATGATGTGGATAAGA
CCATGGATGAGATCGATGAGCAGACCGAGAACATGAAGCAGATTCAAGAA
GCATTATCAACTCCTATTGGTGCTGCTGCTGATTTCGATGAGGATGAATT
GGAAGCAGAACTTGAAGAACTGGAAGGTGCTGAGTTGGAAGAGCAGCTTC
TACAGCCAGCTACAACAGCTCCTGCTGCTCCGGTTCAAGTCCCTGCTGGC
AAGAAACAAGCCCGTCCTGTTCCCAAAAGCAGCGAACAGCTGAGGAAGAT
GAGCTTGCTGCTTTACAAGCTGAAATGGCTCTTAAAGCAGGGTTTTACGG
CCATAATGAAGAATATTATTAAAATAACCTGGCCGAATAATGTGAAAATT
TATGCCCTATTTGGATTACCTTCAAAAATTCTGGTGTGCATTCAAGGAAC
AAACTGGTATTAAAAGTTTGGCGTAAACTAATCCTGGTTTGAAAAAAGGA
ACCCTGGATTCCGGCTCTAAAAAAACCTTTTAAATGGAATTCATCCATTT
TTAAAGGGTTTTTTC
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