DY257801

Overview
NameDY257801
Unique NameDY257801
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1294
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1036 contig Ccv1_Contig1036:1..1294. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY257801 vs. ExPASy Swiss-Prot
Match: QKIL5_ARATH (KH domain-containing protein At1g09660 OS=Arabidopsis thaliana GN=At1g09660 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.489e-51
Identity = 100/168 (59.52%), Postives = 121/168 (72.02%), Query Frame = 3 
Query:  330 KLLNQKIKQKTGYNPSFVDHERFEHDSPFRSLGQPNGTPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPAIPTTPVVKRKITLDVPVDKYPNQFNFVGRILGPRGNSLKRV*AMTECMVFIRGRGSITDSIXXXXXXXXPGYDHLNEPLHV*EEAEFPEDIKN 833
            +LLN +I++ +    SF D +R+EH SPFRSLGQP    +DLEG S MQ EEN HLQR +PF+ P  +GW G+P +P  P+VK+ I LDVPVDKYP+ +NFVGRILGPRGNSLKRV   T C VFIRGRGS+ D++        PGY+HL EPLHV  EAE PEDI N
Sbjct:   68 RLLNHEIRRVS----SFPDLDRYEHGSPFRSLGQPTNGKLDLEGWSMMQAEENCHLQRASPFRGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPS-YNFVGRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIIN 230

HSP 2 Score: 26.1794 bits (56), Expect = 4.489e-51
Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = 1 
Query:  862 KNLLKPVDEPLDLYKKQHQPKL 927
            ++LLKP+DE +D YK++   +L
Sbjct:  241 ESLLKPMDESMDHYKREQLKEL 262
[Close]
BLAST of DY257801 vs. ExPASy Swiss-Prot
Match: QKIL1_ARATH (KH domain-containing protein At4g26475 OS=Arabidopsis thaliana GN=At4g26475 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 9.131e-32
Identity = 74/166 (44.58%), Postives = 97/166 (58.43%), Query Frame = 3 
Query:  330 KLLNQKIKQKTGYNPSFVDHERFEHDSPFRSLGQPNGTPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPAIPTTPVVKRKITLDVPVDKYPNQFNFVGRILGPRGNSLKRV*AMTECMVFIRGRGSITDSIXXXXXXXXPGYDHLNEPLHV*EEAEFPEDI 827
            +L+NQ+I + T    + +   RF+H SP  S G    +  D+ G ++    E           + P+  W   P   +  +VKR I +D+PVDKYPN +NFVGR+LGPRGNSLKRV A T+C V IRGRGSI D I        PGY+HLNEPLH+  EAE P +I
Sbjct:   84 RLMNQEILRVTTLLENALSQSRFDHPSPLASGGIFQNSRADMNGWASQFPSERS-------VSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPN-YNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEI 241

HSP 2 Score: 24.2534 bits (51), Expect = 9.131e-32
Identity = 11/21 (52.38%), Postives = 14/21 (66.67%), Query Frame = 1 
Query:  865 NLLKPVDEPLDLYKKQHQPKL 927
            +LL PV+E  D YKKQ   +L
Sbjct:  255 DLLTPVEETHDFYKKQQLREL 275
[Close]
BLAST of DY257801 vs. ExPASy Swiss-Prot
Match: QKIL4_ARATH (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.831e-30
Identity = 82/173 (47.40%), Postives = 102/173 (58.96%), Query Frame = 3 
Query:  327 TKLLNQKIKQKTGYNPS--FVDHERFEHDSPFRSLGQPN----GTPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPAIPTTPVVKRKITLDVPVDKYPNQFNFVGRILGPRGNSLKRV*AMTECMVFIRGRGSITDSIXXXXXXXXPGYDHLNEPLHV*EEAEFPEDI 827
            ++LLNQ+I + TG  P+  F D +R  H SP   +  PN     +   L G + +  E  G    MA       M WQG PA P++  VKR + LD+PVD YPN FNFVGR+LGPRGNSLKRV A T C V+IRG+GSI D          PGY+HLNE LH+  EA+ P DI
Sbjct:   53 SRLLNQEIFRITGMMPNQGFTDFDRLRHRSP-SPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMA-------MEWQGAPASPSSYPVKRILRLDLPVDTYPN-FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDI 216

HSP 2 Score: 22.7126 bits (47), Expect = 2.831e-30
Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 1 
Query:  862 KNLLKPVDEPLDLYKKQHQPKL 927
            + L+KPVDE  D  K+Q   +L
Sbjct:  229 EELVKPVDESQDYIKRQQLREL 250
[Close]
BLAST of DY257801 vs. ExPASy Swiss-Prot
Match: QKIL2_ARATH (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 3.039e-29
Identity = 75/168 (44.64%), Postives = 94/168 (55.95%), Query Frame = 3 
Query:  330 KLLNQKIKQKTGY--NPSFVDHERFEHDSPFRSLGQPNGTPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPAIPTTPVVKRKITLDVPVDKYPNQFNFVGRILGPRGNSLKRV*AMTECMVFIRGRGSITDSIXXXXXXXXPGYDHLNEPLHV*EEAEFPEDI 827
            +LLNQ+I + T    N + +     +H SP  S G       D+ G ++    E     R  P  + P   W   P   +  + KR I +D+PVD YPN FNFVGR+LGPRGNSLKRV A T+C V IRGRGSI D I        PGY+HLNEPLH+  EAE P +I
Sbjct:   88 RLLNQEILRVTTLLENATVLSQSGLDHPSPLASGGIFQNARADMNGWASQFPSE-----RSVP--SSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPN-FNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEI 247

HSP 2 Score: 23.8682 bits (50), Expect = 3.039e-29
Identity = 10/21 (47.62%), Postives = 15/21 (71.43%), Query Frame = 1 
Query:  865 NLLKPVDEPLDLYKKQHQPKL 927
            +LL P++E  D+YKKQ   +L
Sbjct:  261 DLLTPMEETHDMYKKQQLREL 281
[Close]
BLAST of DY257801 vs. ExPASy Swiss-Prot
Match: QKIL3_ARATH (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.045e-29
Identity = 75/169 (44.38%), Postives = 95/169 (56.21%), Query Frame = 3 
Query:  327 TKLLNQKIKQKTGY--NPSFVDHERFEHDSPFRSLGQPNGTPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPAIPTTPVVKRKITLDVPVDKYPNQFNFVGRILGPRGNSLKRV*AMTECMVFIRGRGSITDSIXXXXXXXXPGYDHLNEPLHV*EEAEFPEDI 827
            ++LLNQ++ + +G   N  F D +R  H SP         + +   GL       NG  Q         +M WQG P  P++  VKR + L++PVD YPN FNFVGR+LGPRGNSLKRV A T C VFIRG+GSI D          PGY+HLNE LH+  EA+ P  I
Sbjct:   54 SRLLNQEMFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGW----NGLSQERLSGTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPN-FNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASI 217

HSP 2 Score: 24.2534 bits (51), Expect = 3.045e-29
Identity = 11/22 (50.00%), Postives = 14/22 (63.64%), Query Frame = 1 
Query:  862 KNLLKPVDEPLDLYKKQHQPKL 927
            + LLKPVDE  D  K+Q   +L
Sbjct:  230 EELLKPVDESQDFIKRQQLREL 251
[Close]
BLAST of DY257801 vs. ExPASy Swiss-Prot
Match: QKI_RAT (Protein quaking OS=Rattus norvegicus GN=Qki PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.016e-12
Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 3 
Query:  567 PVVKRKITLDVPVDKYPNQFNFVGRILGPRGNSLKRV*AMTECMVFIRGRGSITDSIXXXXXXXXPGYDHLNEPLHV*EEAEFPEDIKNPAWIMLQQ 857
            P+V+ +  L VPV +YP+ FNFVGRILGPRG + K++ A T C + +RG+GS+ D          P ++HLNE LHV       ED +N A I L++
Sbjct:   78 PIVQLQEKLYVPVKEYPD-FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHV---LITVEDAQNRAEIKLKR 170
[Close]
BLAST of DY257801 vs. ExPASy Swiss-Prot
Match: QKI_PIG (Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.016e-12
Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 3 
Query:  567 PVVKRKITLDVPVDKYPNQFNFVGRILGPRGNSLKRV*AMTECMVFIRGRGSITDSIXXXXXXXXPGYDHLNEPLHV*EEAEFPEDIKNPAWIMLQQ 857
            P+V+ +  L VPV +YP+ FNFVGRILGPRG + K++ A T C + +RG+GS+ D          P ++HLNE LHV       ED +N A I L++
Sbjct:   78 PIVQLQEKLYVPVKEYPD-FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHV---LITVEDAQNRAEIKLKR 170
[Close]
BLAST of DY257801 vs. ExPASy Swiss-Prot
Match: QKI_MOUSE (Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.016e-12
Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 3 
Query:  567 PVVKRKITLDVPVDKYPNQFNFVGRILGPRGNSLKRV*AMTECMVFIRGRGSITDSIXXXXXXXXPGYDHLNEPLHV*EEAEFPEDIKNPAWIMLQQ 857
            P+V+ +  L VPV +YP+ FNFVGRILGPRG + K++ A T C + +RG+GS+ D          P ++HLNE LHV       ED +N A I L++
Sbjct:   78 PIVQLQEKLYVPVKEYPD-FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHV---LITVEDAQNRAEIKLKR 170
[Close]
BLAST of DY257801 vs. ExPASy Swiss-Prot
Match: QKI_HUMAN (Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.016e-12
Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 3 
Query:  567 PVVKRKITLDVPVDKYPNQFNFVGRILGPRGNSLKRV*AMTECMVFIRGRGSITDSIXXXXXXXXPGYDHLNEPLHV*EEAEFPEDIKNPAWIMLQQ 857
            P+V+ +  L VPV +YP+ FNFVGRILGPRG + K++ A T C + +RG+GS+ D          P ++HLNE LHV       ED +N A I L++
Sbjct:   78 PIVQLQEKLYVPVKEYPD-FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHV---LITVEDAQNRAEIKLKR 170
[Close]
BLAST of DY257801 vs. ExPASy Swiss-Prot
Match: QKI_HORSE (Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.016e-12
Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 3 
Query:  567 PVVKRKITLDVPVDKYPNQFNFVGRILGPRGNSLKRV*AMTECMVFIRGRGSITDSIXXXXXXXXPGYDHLNEPLHV*EEAEFPEDIKNPAWIMLQQ 857
            P+V+ +  L VPV +YP+ FNFVGRILGPRG + K++ A T C + +RG+GS+ D          P ++HLNE LHV       ED +N A I L++
Sbjct:   78 PIVQLQEKLYVPVKEYPD-FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHV---LITVEDAQNRAEIKLKR 170
The following BLAST results are available for this feature:
BLAST of DY257801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
QKIL5_ARATH4.489e-5159.52KH domain-containing protein At1g09660 OS=Arabidop... [more]
QKIL1_ARATH9.131e-3244.58KH domain-containing protein At4g26475 OS=Arabidop... [more]
QKIL4_ARATH2.831e-3047.40KH domain-containing protein At3g08620 OS=Arabidop... [more]
QKIL2_ARATH3.039e-2944.64KH domain-containing protein At5g56140 OS=Arabidop... [more]
QKIL3_ARATH3.045e-2944.38KH domain-containing protein At2g38610 OS=Arabidop... [more]
QKI_RAT1.016e-1244.33Protein quaking OS=Rattus norvegicus GN=Qki PE=1 S... [more]
QKI_PIG1.016e-1244.33Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1[more]
QKI_MOUSE1.016e-1244.33Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1[more]
QKI_HUMAN1.016e-1244.33Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1[more]
QKI_HORSE1.016e-1244.33Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1CB11ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257801 ID=DY257801; Name=DY257801; organism=Citrus clementina; type=EST; length=1294bp
GCACACAGGCTGACCTACGATTTTGCTCAGACTTAAGATAGTCCCAATGT
TTTGTTATTTCTTGTGCTTTCACCATCTTTTTATTTTAATGAACATGTTT
CCATGTACTCCCTTATCATTTTACCTTATAAAAATTTTTAATTGAACTTC
TAAAGTGATATATATTTGCCCCAGTAATATAGTGCCTTTATCATATGACG
AAATTATTGCCATCCCCCATTCCGACATCATAAATGAAAAAAAATAAAAA
AAAAGAATAAGGCAAAATTAATGAAAAAAAAAGCAAAAATAAAAACCATT
ATGATCCAAATTTTGCCACAAAGCAAACAAAGCTTCTCAATCAAAAAATC
AAACAAAAAACGGGTTACAATCCAAGTTTTGTTGATCATGAAAGGTTTGA
GCATGATAGCCCATTTAGGTCATTAGGTCAGCCAAATGGAACACCAATGG
ATTTGGAGGGTTTGTCTGCAATGCAAACTGAGGAAAATGGGCACCTTCAA
AGAATGGCCCCTTTTCAAACTCCTCCTTCAATGGGCTGGCAAGGTATTCC
TGCAATTCCAACCACACCTGTTGTAAAGAGAAAAATTACACTTGATGTTC
CTGTGGATAAATATCCAAATCAGTTTAATTTTGTCGGACGGATTTTGGGA
CCGCGTGGGAACTCGCTCAAAAGAGTCTAAGCCATGACAGAATGTATGGT
GTTCATTAGAGGCCGGGGTTCAATCACGGATTCAATAAAAAAAAAAAAAC
TTAAAGATAAACCTGGATATGACCATCTTAATGAGCCACTGCACGTGTAA
GAGGAGGCCGAATTTCCGGAGGATATAAAAAATCCCGCTTGGATCATGCT
GCAACAATACAAAAAACCTTTTAAAACCTGTTGATGAGCCCTTGGATCTT
TACAAAAAACAACACCAGCCGAAATTACTCCCCCAAATAAAAACTCCTAA
AAAAAAACACCCAAACATGAATCCAAAAAAAGAATCCAAAAAAGATAACC
CTTTACCAATGGTGGAATGAAACAGCGCCAAAACCCGAAAAAAAAAAATG
TAAAACAAAACCCTGGATAAAATTGGACCTTCCAAAGAAACCCCCGGGAT
TAACGGCATTTTAATGTTATTTCCTTTCCCTGAAAAATCTTTATTTTGGT
TTTTTTTTTTTTACAAAACCTTTTGGGGAGAAAAAAAATTTAAAATTAAA
AAAAAAAATTTATTTTGAATAAAAAAAATCTCCGGGAAAATTTTCTTTTT
TTTTGCCACCCCCCTCCCCCTCGGGGTTGAGGGGCGCCCCCCCC
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