DY257807

Overview
NameDY257807
Unique NameDY257807
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length753
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig164 contig Ccv1_Contig164:836..1588. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC2_PEA (Pyruvate decarboxylase isozyme 2 (Fragment) OS=Pisum sativum GN=PDC2 PE=2 SV=1)

HSP 1 Score: 390.578 bits (1002), Expect = 4.916e-108
Identity = 184/191 (96.34%), Postives = 188/191 (98.43%), Query Frame = 2
Query:    2 HIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPPNPQ 574
            HIQKMLSSETAVIAETGDSWFNCQKLKLP+GCGYEFQMQYGSIGWSVGATLGYAQ+VPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEEL+EAI  ATGPKKD LCFIEV+VHKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:  215 HIQKMLSSETAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGATLGYAQAVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELVEAIAKATGPKKDSLCFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ 405          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC2_ORYSI (Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. indica GN=PDC2 PE=2 SV=2)

HSP 1 Score: 360.533 bits (924), Expect = 5.448e-99
Identity = 168/191 (87.96%), Postives = 178/191 (93.19%), Query Frame = 2
Query:    2 HIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPPNPQ 574
            H+QKML+S++AVIAETGDSWFNCQKLKLP+GCGYEFQMQYGSIGWSVGA LGYAQ   +KRVIACIGDGSFQVTAQDVSTM+RC Q +IIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWT+KV CEEEL EAI  A G KKDCLCFIEV+ HKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:  416 HVQKMLNSDSAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGALLGYAQGAKDKRVIACIGDGSFQVTAQDVSTMIRCAQNSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTSKVKCEEELTEAIGMALGEKKDCLCFIEVIAHKDDTSKELLEWGSRVSAANSRPPNPQ 606          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC1_ORYSJ (Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. japonica GN=PDC1 PE=2 SV=1)

HSP 1 Score: 357.451 bits (916), Expect = 4.612e-98
Identity = 165/191 (86.39%), Postives = 180/191 (94.24%), Query Frame = 2
Query:    2 HIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPPNPQ 574
            HI++MLS +TAVIAETGDSWFNCQKL+LP+GCGYEFQMQYGSIGWSVGATLGYAQ+  +KRVI+CIGDGSFQ+TAQDVSTMLRCGQK+IIFLINNGGYTIEVEIHDGPYNVIKNW+YTGL+DAIHN +G CWT KV  EEELIEAI  ATG KKDCLCFIE++VHKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:  415 HIKEMLSGDTAVIAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVISCIGDGSFQMTAQDVSTMLRCGQKSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLIDAIHNSDGNCWTKKVRTEEELIEAIATATGAKKDCLCFIEIIVHKDDTSKELLEWGSRVSAANSRPPNPQ 605          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC1_ORYSI (Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. indica GN=PDC1 PE=2 SV=1)

HSP 1 Score: 357.451 bits (916), Expect = 4.612e-98
Identity = 165/191 (86.39%), Postives = 180/191 (94.24%), Query Frame = 2
Query:    2 HIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPPNPQ 574
            HI++MLS +TAVIAETGDSWFNCQKL+LP+GCGYEFQMQYGSIGWSVGATLGYAQ+  +KRVI+CIGDGSFQ+TAQDVSTMLRCGQK+IIFLINNGGYTIEVEIHDGPYNVIKNW+YTGL+DAIHN +G CWT KV  EEELIEAI  ATG KKDCLCFIE++VHKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:  415 HIKEMLSGDTAVIAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVISCIGDGSFQMTAQDVSTMLRCGQKSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLIDAIHNSDGNCWTKKVRTEEELIEAIATATGAKKDCLCFIEIIVHKDDTSKELLEWGSRVSAANSRPPNPQ 605          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC2_ORYSJ (Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. japonica GN=PDC2 PE=2 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 2.989e-97
Identity = 167/191 (87.43%), Postives = 178/191 (93.19%), Query Frame = 2
Query:    2 HIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPPNPQ 574
            H+QKML+S++AVIAETGDSWFNCQKLKLP+GCGYEFQMQYGSIGWSVGA LGYAQ   +KRVIACIGDGSFQVTAQDVSTM+RC Q +IIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWT+KV CEEEL EAI  A G +KDCLCFIEV+ HKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:  416 HVQKMLNSDSAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGALLGYAQGAKDKRVIACIGDGSFQVTAQDVSTMIRCAQNSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTSKVKCEEELTEAIGMALG-EKDCLCFIEVIAHKDDTSKELLEWGSRVSAANSRPPNPQ 605          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC1_MAIZE (Pyruvate decarboxylase isozyme 1 OS=Zea mays GN=PDC1 PE=2 SV=1)

HSP 1 Score: 351.288 bits (900), Expect = 3.305e-96
Identity = 164/191 (85.86%), Postives = 177/191 (92.67%), Query Frame = 2
Query:    2 HIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPPNPQ 574
            HI+ MLS ++AV+AETGDSWFNCQKL+LP+GCGYEFQMQYGSIGWSVGATLGYAQ+  +KRVIACIGDGSFQVTAQDVSTMLRCGQK+IIFLINNGGYTIEVEIHDGPYNVIKNW+YTGLV+AIHN EG CWT KV  EE+L EAI   TG KKDCLCFIEV+VHKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:  420 HIKGMLSGDSAVVAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQDVSTMLRCGQKSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNSEGNCWTMKVRTEEQLKEAIATVTGAKKDCLCFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ 610          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC2_TOBAC (Pyruvate decarboxylase isozyme 2 OS=Nicotiana tabacum GN=PDC2 PE=2 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 5.638e-96
Identity = 172/217 (79.26%), Postives = 178/217 (82.03%), Query Frame = 2
Query:    2 HIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGY--------------------------EFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPPNPQ 574
            HIQKMLS ETAVIAETGDSWFNCQKLKLP+GCGY                          EFQMQYGSIGWSVGATLGYAQSVP+KRVI+CIGDGSFQVTAQDVSTM+RC QK IIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEG CWT KV  EEEL EAI  ATG KKDCLCFIEV+VHKDDTSKELLEWGSRV +AN RPPNPQ
Sbjct:  398 HIQKMLSDETAVIAETGDSWFNCQKLKLPEGCGYVTNNSLSAWYPFYLQTLEEKSSCCRYEFQMQYGSIGWSVGATLGYAQSVPKKRVISCIGDGSFQVTAQDVSTMIRCEQKNIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGNCWTMKVRTEEELTEAIATATGEKKDCLCFIEVIVHKDDTSKELLEWGSRVCSANGRPPNPQ 614          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC1_PEA (Pyruvate decarboxylase isozyme 1 OS=Pisum sativum GN=PDC1 PE=2 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 6.891e-94
Identity = 158/191 (82.72%), Postives = 174/191 (91.10%), Query Frame = 2
Query:    2 HIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPPNPQ 574
            HIQ ++S +TAVIAETGDSWFNCQKL+LP+ CGYEFQMQYGSIGWSVGATLGYAQ+  +KRVIACIGDGSFQVTAQD+STM+RCGQ++IIFLINNGGYTIEVEIHDGPYNVIKNW+YTG V AIHNG+GKCWT KV  EE+L EAI  ATG +KD LCFIEV  HKDDTSKELLEWGSRV+AANSRPPNPQ
Sbjct:  403 HIQALISGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAATDKRVIACIGDGSFQVTAQDISTMIRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGFVSAIHNGQGKCWTAKVRTEEDLTEAIATATGAEKDSLCFIEVFAHKDDTSKELLEWGSRVAAANSRPPNPQ 593          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC3_MAIZE (Pyruvate decarboxylase isozyme 3 (Fragment) OS=Zea mays GN=PDC3 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.437e-91
Identity = 160/191 (83.77%), Postives = 171/191 (89.53%), Query Frame = 2
Query:    2 HIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPPNPQ 574
            H+QKML+ ++AVIAETGDSWFNCQKLKLP+GCGYEFQMQYGSIGWSVGA LGY Q    KRVIA IGDGSFQVTAQDVST+LRC Q +IIFLINNGGYTIEVEIHDGPYNVIKNWNYTG VDAIHNG GKCWT+KV  EE+L  AIE A G +KDCLCFIEV+ HKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:   13 HVQKMLTGDSAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGALLGYPQGANHKRVIAFIGDGSFQVTAQDVSTILRCEQNSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGFVDAIHNGLGKCWTSKVKSEEDLTAAIETALG-EKDCLCFIEVIAHKDDTSKELLEWGSRVSAANSRPPNPQ 202          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC3_ORYSJ (Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. japonica GN=PDC3 PE=2 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 4.181e-91
Identity = 159/193 (82.38%), Postives = 174/193 (90.16%), Query Frame = 2
Query:    2 HIQKMLSSET--AVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPPNPQ 574
            HIQ+M+      AV+AETGDSWFNCQKL+LP+GCGYEFQMQYGSIGWSVGA LGYAQ+V +KRV+ACIGDGSFQVTAQDVSTMLRCGQ++IIFLINNGGYTIEVEIHDGPYNVIKNW+Y GLV+AIHNGEG+CW T+V CEEEL  AI  ATG K D LCFIEV+ HKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:  396 HIQRMIGGTEIGAVMAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGALLGYAQAV-QKRVVACIGDGSFQVTAQDVSTMLRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYVGLVNAIHNGEGRCWATRVRCEEELEAAIATATGDKADSLCFIEVVAHKDDTSKELLEWGSRVSAANSRPPNPQ 587          
The following BLAST results are available for this feature:
BLAST of DY257807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
PDC2_PEA4.916e-10896.34Pyruvate decarboxylase isozyme 2 (Fragment) OS=Pis... [more]
PDC2_ORYSI5.448e-9987.96Pyruvate decarboxylase isozyme 2 OS=Oryza sativa s... [more]
PDC1_ORYSJ4.612e-9886.39Pyruvate decarboxylase isozyme 1 OS=Oryza sativa s... [more]
PDC1_ORYSI4.612e-9886.39Pyruvate decarboxylase isozyme 1 OS=Oryza sativa s... [more]
PDC2_ORYSJ2.989e-9787.43Pyruvate decarboxylase isozyme 2 OS=Oryza sativa s... [more]
PDC1_MAIZE3.305e-9685.86Pyruvate decarboxylase isozyme 1 OS=Zea mays GN=PD... [more]
PDC2_TOBAC5.638e-9679.26Pyruvate decarboxylase isozyme 2 OS=Nicotiana taba... [more]
PDC1_PEA6.891e-9482.72Pyruvate decarboxylase isozyme 1 OS=Pisum sativum ... [more]
PDC3_MAIZE1.437e-9183.77Pyruvate decarboxylase isozyme 3 (Fragment) OS=Zea... [more]
PDC3_ORYSJ4.181e-9182.38Pyruvate decarboxylase isozyme 3 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1CD01ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257807 ID=DY257807; Name=DY257807; organism=Citrus clementina; type=EST; length=753bp
ACATATACAGAAGATGCTGTCTAGTGAAACTGCTGTGATTGCTGAGACAG
GGGACTCTTGGTTTAACTGCCAGAAACTGAAATTGCCTAAGGGATGCGGG
TATGAGTTCCAAATGCAATATGGATCAATTGGTTGGTCTGTTGGTGCTAC
TCTTGGATATGCACAGTCTGTGCCAGAGAAGCGTGTCATTGCTTGCATAG
GTGATGGTAGCTTCCAGGTAACTGCACAAGATGTGTCAACAATGCTGCGA
TGTGGGCAGAAGACTATAATCTTCCTGATTAACAATGGTGGTTACACCAT
TGAAGTTGAGATCCATGATGGACCGTACAATGTGATCAAGAACTGGAACT
ACACCGGGTTGGTTGATGCAATCCACAATGGCGAAGGCAAGTGCTGGACA
ACCAAGGTCTTCTGCGAGGAGGAGCTCATCGAAGCCATTGAGAACGCTAC
TGGACCCAAGAAGGATTGCTTGTGCTTCATTGAAGTACTTGTTCACAAGG
ATGATACAAGCAAAGAGCTTTTGGAATGGGGCTCCAGGGTCTCCGCTGCC
AATAGCCGCCCACCAAATCCTCAGTAGATATGAGGCGGCTCATATTGCAA
ATTGCACTCTACTACCATTTATAGCCAAATTAAATGCGCGCATGTCTTTT
CTGTGGTTACTTTACTAAGTTTTGGGTATTTTGAACTATTTGCTGGTTTC
TAATGTAAATTCATTTTAAAATTTAATATCTACTAAATCCTCTCCATTGC
TTC
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